{"species":{"id":700,"slug":"oncorhynchus-nerka","refseq":"NC_008615.1","scientificName":"Oncorhynchus nerka","commonName":"Sockeye salmon","taxonomy":{"kingdom":"Animalia","phylum":"Chordata","class":"Actinopterygii","order":"Salmoniformes","family":"Salmonidae","genus":"Oncorhynchus"},"maxLongevityYears":8,"mtdnaSizeBp":16658,"nonCodingBp":1070,"gcPercent":46.194,"traits":{"adultWeightG":4240.5,"birthWeightG":null,"metabolicRateW":null,"bodyTemperatureK":null,"femaleMaturityDays":730,"maleMaturityDays":730,"gestationDays":null,"litterSize":null,"littersPerYear":null,"growthRatePerDay":null,"source":"AnAge Build 15 (HAGRID 04466)"},"legacyId":18002,"ncbiTaxid":8023,"ncbiSpeciesTaxid":8023,"previousScientificNames":[],"retiredReason":null,"reviewFlags":[],"changeKinds":[],"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1; AnAge build 15 (2023-07-03)"},"lifespan":{"source":"AnAge","sourceVersion":"AnAge build 15 (2023-07-03)","sourceRecordId":"04466","quality":"acceptable","sampleSize":"medium","recordType":"wild","license":"Free to use, subject to the Human Ageing Genomic Resources conditions of use (https://genomics.senescence.info/legal.html); cite Tacutu et al. 2013, Nucleic Acids Res 41:D1027-D1033"}},"regions":[{"speciesId":700,"region":"total_mtDNA","lengthBp":16658,"a":4598,"c":4817,"g":2878,"t":4365,"other":0,"gcPercent":46.194,"gcSkew":-0.25198,"atSkew":0.026,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"total_pc","lengthBp":11414,"a":2992,"c":3486,"g":1799,"t":3137,"other":0,"gcPercent":46.303,"gcSkew":-0.31921,"atSkew":-0.02366,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"total_rRNA","lengthBp":2625,"a":828,"c":679,"g":594,"t":524,"other":0,"gcPercent":48.495,"gcSkew":-0.06677,"atSkew":0.22485,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"total_tRNA","lengthBp":1551,"a":461,"c":396,"g":308,"t":386,"other":0,"gcPercent":45.39,"gcSkew":-0.125,"atSkew":0.08855,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"rRNA-12S","lengthBp":947,"a":280,"c":257,"g":220,"t":190,"other":0,"gcPercent":50.37,"gcSkew":-0.07757,"atSkew":0.19149,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"rRNA-16S","lengthBp":1678,"a":548,"c":422,"g":374,"t":334,"other":0,"gcPercent":47.437,"gcSkew":-0.0603,"atSkew":0.24263,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"D_Loop","lengthBp":1004,"a":305,"c":236,"g":160,"t":303,"other":0,"gcPercent":39.442,"gcSkew":-0.19192,"atSkew":0.00329,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND1","lengthBp":975,"a":236,"c":308,"g":166,"t":265,"other":0,"gcPercent":48.615,"gcSkew":-0.29958,"atSkew":-0.05788,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND2","lengthBp":1050,"a":282,"c":341,"g":145,"t":282,"other":0,"gcPercent":46.286,"gcSkew":-0.40329,"atSkew":0,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"COX1","lengthBp":1551,"a":391,"c":426,"g":286,"t":448,"other":0,"gcPercent":45.906,"gcSkew":-0.19663,"atSkew":-0.06794,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"COX2","lengthBp":691,"a":188,"c":189,"g":115,"t":199,"other":0,"gcPercent":43.994,"gcSkew":-0.24342,"atSkew":-0.02842,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ATP8","lengthBp":168,"a":49,"c":56,"g":22,"t":41,"other":0,"gcPercent":46.429,"gcSkew":-0.4359,"atSkew":0.08889,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ATP6","lengthBp":684,"a":175,"c":215,"g":87,"t":207,"other":0,"gcPercent":44.152,"gcSkew":-0.42384,"atSkew":-0.08377,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"COX3","lengthBp":786,"a":184,"c":234,"g":139,"t":229,"other":0,"gcPercent":47.455,"gcSkew":-0.25469,"atSkew":-0.10896,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND3","lengthBp":351,"a":78,"c":115,"g":59,"t":99,"other":0,"gcPercent":49.573,"gcSkew":-0.32184,"atSkew":-0.11864,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND4L","lengthBp":297,"a":70,"c":95,"g":51,"t":81,"other":0,"gcPercent":49.158,"gcSkew":-0.30137,"atSkew":-0.07285,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND4","lengthBp":1381,"a":363,"c":416,"g":209,"t":393,"other":0,"gcPercent":45.257,"gcSkew":-0.3312,"atSkew":-0.03968,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND5","lengthBp":1839,"a":525,"c":555,"g":259,"t":500,"other":0,"gcPercent":44.263,"gcSkew":-0.36364,"atSkew":0.02439,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND6","lengthBp":522,"a":195,"c":187,"g":70,"t":70,"other":0,"gcPercent":49.234,"gcSkew":-0.45525,"atSkew":0.4717,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"CYTB","lengthBp":1141,"a":267,"c":352,"g":193,"t":329,"other":0,"gcPercent":47.765,"gcSkew":-0.29174,"atSkew":-0.10403,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}}],"codonUsage":[{"speciesId":700,"region":"ND1","counts":{"UUU":9,"UUC":8,"UUA":7,"UUG":0,"UCU":4,"UCC":6,"UCA":6,"UCG":0,"UAU":3,"UAC":9,"UAA":0,"UAG":1,"UGU":0,"UGC":0,"UGA":4,"UGG":4,"CUU":13,"CUC":15,"CUA":25,"CUG":5,"CCU":8,"CCC":12,"CCA":3,"CCG":1,"CAU":1,"CAC":3,"CAA":6,"CAG":1,"CGU":1,"CGC":0,"CGA":4,"CGG":3,"AUU":5,"AUC":13,"AUA":6,"AUG":2,"ACU":6,"ACC":7,"ACA":5,"ACG":2,"AAU":3,"AAC":7,"AAA":6,"AAG":1,"AGU":0,"AGC":5,"AGA":0,"AGG":0,"GUU":8,"GUC":5,"GUA":11,"GUG":2,"GCU":6,"GCC":15,"GCA":12,"GCG":3,"GAU":2,"GAC":2,"GAA":10,"GAG":1,"GGU":1,"GGC":4,"GGA":7,"GGG":6},"aminoAcids":{"A":36,"C":0,"D":4,"E":11,"F":17,"G":18,"H":4,"I":18,"K":7,"L":65,"M":8,"N":10,"P":24,"Q":7,"R":8,"S":21,"T":20,"V":26,"W":8,"Y":12,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND2","counts":{"UUU":6,"UUC":4,"UUA":7,"UUG":4,"UCU":6,"UCC":6,"UCA":8,"UCG":0,"UAU":4,"UAC":4,"UAA":0,"UAG":1,"UGU":0,"UGC":1,"UGA":10,"UGG":1,"CUU":19,"CUC":21,"CUA":23,"CUG":6,"CCU":3,"CCC":8,"CCA":8,"CCG":0,"CAU":1,"CAC":6,"CAA":11,"CAG":1,"CGU":1,"CGC":1,"CGA":1,"CGG":1,"AUU":15,"AUC":8,"AUA":9,"AUG":3,"ACU":7,"ACC":21,"ACA":11,"ACG":2,"AAU":5,"AAC":5,"AAA":7,"AAG":1,"AGU":1,"AGC":4,"AGA":0,"AGG":0,"GUU":6,"GUC":2,"GUA":4,"GUG":1,"GCU":5,"GCC":15,"GCA":19,"GCG":1,"GAU":0,"GAC":0,"GAA":5,"GAG":2,"GGU":3,"GGC":4,"GGA":7,"GGG":4},"aminoAcids":{"A":40,"C":1,"D":0,"E":7,"F":10,"G":18,"H":7,"I":23,"K":8,"L":80,"M":12,"N":10,"P":19,"Q":12,"R":4,"S":25,"T":41,"V":13,"W":11,"Y":8,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"COX1","counts":{"UUU":22,"UUC":20,"UUA":14,"UUG":0,"UCU":6,"UCC":8,"UCA":8,"UCG":3,"UAU":8,"UAC":10,"UAA":1,"UAG":0,"UGU":0,"UGC":1,"UGA":15,"UGG":2,"CUU":13,"CUC":11,"CUA":20,"CUG":4,"CCU":3,"CCC":9,"CCA":13,"CCG":3,"CAU":6,"CAC":13,"CAA":2,"CAG":5,"CGU":1,"CGC":0,"CGA":6,"CGG":2,"AUU":18,"AUC":24,"AUA":18,"AUG":6,"ACU":9,"ACC":14,"ACA":13,"ACG":1,"AAU":5,"AAC":10,"AAA":7,"AAG":1,"AGU":0,"AGC":5,"AGA":0,"AGG":0,"GUU":9,"GUC":9,"GUA":13,"GUG":8,"GCU":13,"GCC":22,"GCA":10,"GCG":1,"GAU":3,"GAC":11,"GAA":7,"GAG":4,"GGU":5,"GGC":12,"GGA":20,"GGG":10},"aminoAcids":{"A":46,"C":1,"D":14,"E":11,"F":42,"G":47,"H":19,"I":42,"K":8,"L":62,"M":24,"N":15,"P":28,"Q":7,"R":9,"S":30,"T":37,"V":39,"W":17,"Y":18,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"COX2","counts":{"UUU":2,"UUC":6,"UUA":5,"UUG":0,"UCU":5,"UCC":6,"UCA":2,"UCG":0,"UAU":5,"UAC":4,"UAA":0,"UAG":0,"UGU":1,"UGC":1,"UGA":5,"UGG":0,"CUU":13,"CUC":6,"CUA":4,"CUG":0,"CCU":4,"CCC":6,"CCA":3,"CCG":1,"CAU":3,"CAC":7,"CAA":8,"CAG":0,"CGU":1,"CGC":0,"CGA":5,"CGG":0,"AUU":7,"AUC":11,"AUA":8,"AUG":4,"ACU":6,"ACC":1,"ACA":3,"ACG":0,"AAU":2,"AAC":2,"AAA":5,"AAG":0,"AGU":0,"AGC":3,"AGA":0,"AGG":0,"GUU":7,"GUC":8,"GUA":4,"GUG":3,"GCU":3,"GCC":6,"GCA":4,"GCG":3,"GAU":7,"GAC":6,"GAA":12,"GAG":3,"GGU":2,"GGC":2,"GGA":4,"GGG":1},"aminoAcids":{"A":16,"C":2,"D":13,"E":15,"F":8,"G":9,"H":10,"I":18,"K":5,"L":28,"M":12,"N":4,"P":14,"Q":8,"R":6,"S":16,"T":10,"V":22,"W":5,"Y":9,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ATP8","counts":{"UUU":1,"UUC":3,"UUA":1,"UUG":0,"UCU":0,"UCC":1,"UCA":1,"UCG":0,"UAU":0,"UAC":0,"UAA":1,"UAG":0,"UGU":0,"UGC":0,"UGA":5,"UGG":0,"CUU":0,"CUC":2,"CUA":1,"CUG":1,"CCU":2,"CCC":5,"CCA":2,"CCG":0,"CAU":0,"CAC":2,"CAA":2,"CAG":0,"CGU":0,"CGC":0,"CGA":0,"CGG":0,"AUU":2,"AUC":0,"AUA":0,"AUG":1,"ACU":2,"ACC":1,"ACA":2,"ACG":0,"AAU":1,"AAC":2,"AAA":3,"AAG":0,"AGU":0,"AGC":1,"AGA":0,"AGG":0,"GUU":2,"GUC":1,"GUA":1,"GUG":0,"GCU":2,"GCC":1,"GCA":0,"GCG":0,"GAU":0,"GAC":0,"GAA":1,"GAG":2,"GGU":0,"GGC":1,"GGA":0,"GGG":0},"aminoAcids":{"A":3,"C":0,"D":0,"E":3,"F":4,"G":1,"H":2,"I":2,"K":3,"L":5,"M":1,"N":3,"P":9,"Q":2,"R":0,"S":3,"T":5,"V":4,"W":5,"Y":0,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ATP6","counts":{"UUU":8,"UUC":4,"UUA":6,"UUG":2,"UCU":2,"UCC":2,"UCA":0,"UCG":0,"UAU":2,"UAC":2,"UAA":1,"UAG":0,"UGU":0,"UGC":0,"UGA":5,"UGG":0,"CUU":15,"CUC":9,"CUA":19,"CUG":3,"CCU":5,"CCC":6,"CCA":6,"CCG":0,"CAU":0,"CAC":4,"CAA":8,"CAG":0,"CGU":0,"CGC":2,"CGA":4,"CGG":0,"AUU":12,"AUC":8,"AUA":5,"AUG":4,"ACU":3,"ACC":9,"ACA":8,"ACG":2,"AAU":4,"AAC":5,"AAA":1,"AAG":0,"AGU":0,"AGC":4,"AGA":0,"AGG":0,"GUU":5,"GUC":2,"GUA":5,"GUG":1,"GCU":6,"GCC":7,"GCA":5,"GCG":1,"GAU":0,"GAC":1,"GAA":4,"GAG":0,"GGU":3,"GGC":7,"GGA":1,"GGG":0},"aminoAcids":{"A":19,"C":0,"D":1,"E":4,"F":12,"G":11,"H":4,"I":20,"K":1,"L":54,"M":9,"N":9,"P":17,"Q":8,"R":6,"S":8,"T":22,"V":13,"W":5,"Y":4,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"COX3","counts":{"UUU":10,"UUC":14,"UUA":5,"UUG":1,"UCU":5,"UCC":1,"UCA":3,"UCG":0,"UAU":1,"UAC":11,"UAA":1,"UAG":0,"UGU":0,"UGC":2,"UGA":11,"UGG":1,"CUU":11,"CUC":5,"CUA":6,"CUG":5,"CCU":2,"CCC":7,"CCA":3,"CCG":0,"CAU":3,"CAC":13,"CAA":8,"CAG":1,"CGU":0,"CGC":0,"CGA":5,"CGG":0,"AUU":9,"AUC":5,"AUA":3,"AUG":3,"ACU":8,"ACC":8,"ACA":8,"ACG":1,"AAU":2,"AAC":0,"AAA":2,"AAG":0,"AGU":0,"AGC":3,"AGA":0,"AGG":0,"GUU":7,"GUC":4,"GUA":4,"GUG":2,"GCU":5,"GCC":9,"GCA":6,"GCG":1,"GAU":0,"GAC":5,"GAA":7,"GAG":3,"GGU":6,"GGC":11,"GGA":3,"GGG":2},"aminoAcids":{"A":21,"C":2,"D":5,"E":10,"F":24,"G":22,"H":16,"I":14,"K":2,"L":33,"M":6,"N":2,"P":12,"Q":9,"R":5,"S":12,"T":25,"V":17,"W":12,"Y":12,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND3","counts":{"UUU":3,"UUC":4,"UUA":4,"UUG":1,"UCU":1,"UCC":6,"UCA":0,"UCG":0,"UAU":1,"UAC":1,"UAA":0,"UAG":1,"UGU":1,"UGC":0,"UGA":4,"UGG":1,"CUU":4,"CUC":6,"CUA":6,"CUG":6,"CCU":1,"CCC":5,"CCA":1,"CCG":1,"CAU":0,"CAC":0,"CAA":2,"CAG":1,"CGU":1,"CGC":0,"CGA":1,"CGG":0,"AUU":4,"AUC":6,"AUA":0,"AUG":1,"ACU":3,"ACC":3,"ACA":4,"ACG":0,"AAU":1,"AAC":1,"AAA":0,"AAG":1,"AGU":0,"AGC":0,"AGA":0,"AGG":0,"GUU":1,"GUC":0,"GUA":2,"GUG":0,"GCU":1,"GCC":8,"GCA":2,"GCG":0,"GAU":1,"GAC":3,"GAA":5,"GAG":1,"GGU":0,"GGC":1,"GGA":4,"GGG":1},"aminoAcids":{"A":11,"C":1,"D":4,"E":6,"F":7,"G":6,"H":0,"I":10,"K":1,"L":27,"M":1,"N":2,"P":8,"Q":3,"R":2,"S":7,"T":10,"V":3,"W":5,"Y":2,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND4L","counts":{"UUU":4,"UUC":2,"UUA":3,"UUG":0,"UCU":1,"UCC":2,"UCA":3,"UCG":0,"UAU":0,"UAC":1,"UAA":1,"UAG":0,"UGU":2,"UGC":1,"UGA":1,"UGG":0,"CUU":4,"CUC":7,"CUA":9,"CUG":0,"CCU":1,"CCC":0,"CCA":1,"CCG":0,"CAU":1,"CAC":3,"CAA":2,"CAG":1,"CGU":0,"CGC":2,"CGA":0,"CGG":1,"AUU":2,"AUC":0,"AUA":3,"AUG":3,"ACU":2,"ACC":3,"ACA":2,"ACG":0,"AAU":0,"AAC":1,"AAA":0,"AAG":0,"AGU":0,"AGC":3,"AGA":0,"AGG":0,"GUU":0,"GUC":0,"GUA":2,"GUG":1,"GCU":1,"GCC":7,"GCA":5,"GCG":1,"GAU":1,"GAC":0,"GAA":3,"GAG":0,"GGU":1,"GGC":2,"GGA":2,"GGG":1},"aminoAcids":{"A":14,"C":3,"D":1,"E":3,"F":6,"G":6,"H":4,"I":2,"K":0,"L":23,"M":6,"N":1,"P":2,"Q":3,"R":3,"S":9,"T":7,"V":3,"W":1,"Y":1,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND4","counts":{"UUU":7,"UUC":10,"UUA":21,"UUG":2,"UCU":5,"UCC":13,"UCA":6,"UCG":0,"UAU":5,"UAC":8,"UAA":0,"UAG":0,"UGU":2,"UGC":3,"UGA":16,"UGG":4,"CUU":19,"CUC":20,"CUA":24,"CUG":9,"CCU":5,"CCC":14,"CCA":6,"CCG":1,"CAU":1,"CAC":11,"CAA":11,"CAG":1,"CGU":2,"CGC":4,"CGA":2,"CGG":3,"AUU":20,"AUC":18,"AUA":19,"AUG":7,"ACU":7,"ACC":17,"ACA":13,"ACG":2,"AAU":5,"AAC":6,"AAA":9,"AAG":1,"AGU":3,"AGC":5,"AGA":0,"AGG":0,"GUU":2,"GUC":7,"GUA":4,"GUG":1,"GCU":10,"GCC":14,"GCA":8,"GCG":3,"GAU":2,"GAC":3,"GAA":9,"GAG":3,"GGU":5,"GGC":6,"GGA":8,"GGG":8},"aminoAcids":{"A":35,"C":5,"D":5,"E":12,"F":17,"G":27,"H":12,"I":38,"K":10,"L":95,"M":26,"N":11,"P":26,"Q":12,"R":11,"S":32,"T":39,"V":14,"W":20,"Y":13,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND5","counts":{"UUU":17,"UUC":24,"UUA":12,"UUG":4,"UCU":6,"UCC":12,"UCA":10,"UCG":1,"UAU":5,"UAC":4,"UAA":1,"UAG":0,"UGU":3,"UGC":3,"UGA":10,"UGG":4,"CUU":18,"CUC":22,"CUA":29,"CUG":11,"CCU":6,"CCC":11,"CCA":7,"CCG":5,"CAU":3,"CAC":15,"CAA":17,"CAG":3,"CGU":0,"CGC":0,"CGA":7,"CGG":2,"AUU":36,"AUC":19,"AUA":20,"AUG":7,"ACU":21,"ACC":30,"ACA":17,"ACG":3,"AAU":8,"AAC":22,"AAA":16,"AAG":4,"AGU":3,"AGC":10,"AGA":0,"AGG":0,"GUU":3,"GUC":5,"GUA":11,"GUG":2,"GCU":10,"GCC":26,"GCA":10,"GCG":3,"GAU":4,"GAC":8,"GAA":9,"GAG":3,"GGU":1,"GGC":10,"GGA":11,"GGG":9},"aminoAcids":{"A":49,"C":6,"D":12,"E":12,"F":41,"G":31,"H":18,"I":55,"K":20,"L":96,"M":27,"N":30,"P":29,"Q":20,"R":9,"S":42,"T":71,"V":21,"W":14,"Y":9,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"ND6","counts":{"UUU":8,"UUC":2,"UUA":10,"UUG":12,"UCU":6,"UCC":1,"UCA":2,"UCG":1,"UAU":4,"UAC":4,"UAA":0,"UAG":1,"UGU":2,"UGC":0,"UGA":1,"UGG":4,"CUU":7,"CUC":0,"CUA":1,"CUG":1,"CCU":3,"CCC":0,"CCA":1,"CCG":0,"CAU":1,"CAC":1,"CAA":0,"CAG":0,"CGU":3,"CGC":0,"CGA":1,"CGG":1,"AUU":2,"AUC":0,"AUA":2,"AUG":2,"ACU":1,"ACC":1,"ACA":2,"ACG":2,"AAU":0,"AAC":1,"AAA":0,"AAG":1,"AGU":1,"AGC":0,"AGA":0,"AGG":0,"GUU":7,"GUC":0,"GUA":5,"GUG":16,"GCU":7,"GCC":0,"GCA":5,"GCG":7,"GAU":3,"GAC":0,"GAA":1,"GAG":5,"GGU":7,"GGC":1,"GGA":2,"GGG":15},"aminoAcids":{"A":19,"C":2,"D":3,"E":6,"F":10,"G":25,"H":2,"I":2,"K":1,"L":31,"M":4,"N":1,"P":4,"Q":0,"R":5,"S":11,"T":6,"V":28,"W":5,"Y":8,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"CYTB","counts":{"UUU":10,"UUC":20,"UUA":8,"UUG":2,"UCU":5,"UCC":10,"UCA":5,"UCG":2,"UAU":4,"UAC":10,"UAA":0,"UAG":0,"UGU":2,"UGC":2,"UGA":10,"UGG":3,"CUU":14,"CUC":15,"CUA":10,"CUG":9,"CCU":5,"CCC":4,"CCA":9,"CCG":3,"CAU":4,"CAC":8,"CAA":7,"CAG":0,"CGU":0,"CGC":1,"CGA":7,"CGG":0,"AUU":11,"AUC":17,"AUA":7,"AUG":3,"ACU":5,"ACC":9,"ACA":6,"ACG":2,"AAU":5,"AAC":12,"AAA":8,"AAG":1,"AGU":1,"AGC":0,"AGA":0,"AGG":0,"GUU":7,"GUC":9,"GUA":8,"GUG":2,"GCU":5,"GCC":22,"GCA":8,"GCG":0,"GAU":4,"GAC":7,"GAA":4,"GAG":1,"GGU":1,"GGC":10,"GGA":8,"GGG":8},"aminoAcids":{"A":35,"C":4,"D":11,"E":5,"F":30,"G":27,"H":12,"I":28,"K":9,"L":58,"M":10,"N":17,"P":21,"Q":7,"R":8,"S":23,"T":22,"V":26,"W":13,"Y":14,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"speciesId":700,"region":"total_pc","counts":{"UUU":107,"UUC":121,"UUA":103,"UUG":28,"UCU":52,"UCC":74,"UCA":54,"UCG":7,"UAU":42,"UAC":68,"UAA":6,"UAG":4,"UGU":13,"UGC":14,"UGA":97,"UGG":24,"CUU":150,"CUC":139,"CUA":177,"CUG":60,"CCU":48,"CCC":87,"CCA":63,"CCG":15,"CAU":24,"CAC":86,"CAA":84,"CAG":14,"CGU":10,"CGC":10,"CGA":43,"CGG":13,"AUU":143,"AUC":129,"AUA":100,"AUG":46,"ACU":80,"ACC":124,"ACA":94,"ACG":17,"AAU":41,"AAC":74,"AAA":64,"AAG":11,"AGU":9,"AGC":43,"AGA":0,"AGG":0,"GUU":64,"GUC":52,"GUA":74,"GUG":39,"GCU":74,"GCC":152,"GCA":94,"GCG":24,"GAU":27,"GAC":46,"GAA":77,"GAG":28,"GGU":35,"GGC":71,"GGA":77,"GGG":65},"aminoAcids":{"A":344,"C":27,"D":73,"E":105,"F":228,"G":248,"H":110,"I":272,"K":75,"L":657,"M":146,"N":115,"P":213,"Q":98,"R":76,"S":239,"T":315,"V":229,"W":121,"Y":110,"*":10},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}}],"genomeFeatures":[{"name":"D_Loop","type":"D-loop","start":1,"end":1004,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Phe","type":"tRNA","start":1005,"end":1072,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"rRNA-12S","type":"rRNA","start":1073,"end":2019,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Val","type":"tRNA","start":2020,"end":2091,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"rRNA-16S","type":"rRNA","start":2092,"end":3769,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Leu(UUR)","type":"tRNA","start":3770,"end":3844,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"ND1","type":"CDS","start":3845,"end":4819,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Ile","type":"tRNA","start":4824,"end":4895,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Gln","type":"tRNA","start":4893,"end":4963,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Met","type":"tRNA","start":4963,"end":5031,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"ND2","type":"CDS","start":5032,"end":6081,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Trp","type":"tRNA","start":6084,"end":6153,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Ala","type":"tRNA","start":6156,"end":6224,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Asn","type":"tRNA","start":6226,"end":6298,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Cys","type":"tRNA","start":6332,"end":6398,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Tyr","type":"tRNA","start":6399,"end":6469,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"COX1","type":"CDS","start":6471,"end":8021,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Ser(UCN)","type":"tRNA","start":8022,"end":8092,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Asp","type":"tRNA","start":8097,"end":8170,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"COX2","type":"CDS","start":8185,"end":8875,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Lys","type":"tRNA","start":8876,"end":8948,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"ATP8","type":"CDS","start":8950,"end":9117,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"ATP6","type":"CDS","start":9108,"end":9791,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"COX3","type":"CDS","start":9791,"end":10576,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Gly","type":"tRNA","start":10576,"end":10645,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"ND3","type":"CDS","start":10646,"end":10996,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Arg","type":"tRNA","start":10996,"end":11064,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"ND4L","type":"CDS","start":11065,"end":11361,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"ND4","type":"CDS","start":11355,"end":12735,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-His","type":"tRNA","start":12736,"end":12804,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Ser(AGY)","type":"tRNA","start":12805,"end":12873,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Leu(CUN)","type":"tRNA","start":12875,"end":12947,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"ND5","type":"CDS","start":12948,"end":14786,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"ND6","type":"CDS","start":14783,"end":15304,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Glu","type":"tRNA","start":15305,"end":15373,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"CYTB","type":"CDS","start":15377,"end":16517,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Thr","type":"tRNA","start":16518,"end":16589,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}},{"name":"tRNA-Pro","type":"tRNA","start":16589,"end":16658,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_008615.1"}}]}