{"species":{"id":971,"slug":"phaeognathus-hubrichti","refseq":"NC_006344.1","scientificName":"Phaeognathus hubrichti","commonName":"Red Hills salamander","taxonomy":{"kingdom":"Animalia","phylum":"Chordata","class":"Amphibia","order":"Caudata","family":"Plethodontidae","genus":"Phaeognathus"},"maxLongevityYears":19.7,"mtdnaSizeBp":16294,"nonCodingBp":959,"gcPercent":33.708,"traits":{"adultWeightG":null,"birthWeightG":null,"metabolicRateW":null,"bodyTemperatureK":null,"femaleMaturityDays":2008,"maleMaturityDays":null,"gestationDays":null,"litterSize":9,"littersPerYear":null,"growthRatePerDay":null,"source":"AnAge Build 15 (HAGRID 00170)"},"legacyId":17587,"ncbiTaxid":52110,"ncbiSpeciesTaxid":52110,"previousScientificNames":[],"retiredReason":null,"reviewFlags":[],"changeKinds":[],"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1; AnAge build 15 (2023-07-03)"},"lifespan":{"source":"AnAge","sourceVersion":"AnAge build 15 (2023-07-03)","sourceRecordId":"00170","quality":"acceptable","sampleSize":"small","recordType":"captive","license":"Free to use, subject to the Human Ageing Genomic Resources conditions of use (https://genomics.senescence.info/legal.html); cite Tacutu et al. 2013, Nucleic Acids Res 41:D1027-D1033"}},"regions":[{"speciesId":971,"region":"total_mtDNA","lengthBp":16294,"a":5615,"c":3423,"g":2069,"t":5186,"other":1,"gcPercent":33.708,"gcSkew":-0.24654,"atSkew":0.03972,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"total_pc","lengthBp":11331,"a":3788,"c":2431,"g":1316,"t":3796,"other":0,"gcPercent":33.069,"gcSkew":-0.29757,"atSkew":-0.00105,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"total_rRNA","lengthBp":2472,"a":965,"c":461,"g":393,"t":652,"other":1,"gcPercent":34.561,"gcSkew":-0.07963,"atSkew":0.19357,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"total_tRNA","lengthBp":1537,"a":553,"c":326,"g":226,"t":432,"other":0,"gcPercent":35.914,"gcSkew":-0.18116,"atSkew":0.12284,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"rRNA-12S","lengthBp":924,"a":345,"c":187,"g":152,"t":240,"other":0,"gcPercent":36.688,"gcSkew":-0.10324,"atSkew":0.17949,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"rRNA-16S","lengthBp":1548,"a":620,"c":274,"g":241,"t":412,"other":1,"gcPercent":33.29,"gcSkew":-0.06408,"atSkew":0.20155,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"D_Loop","lengthBp":749,"a":239,"c":151,"g":105,"t":254,"other":0,"gcPercent":34.179,"gcSkew":-0.17969,"atSkew":-0.03043,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND1","lengthBp":972,"a":300,"c":220,"g":120,"t":332,"other":0,"gcPercent":34.979,"gcSkew":-0.29412,"atSkew":-0.05063,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND2","lengthBp":1038,"a":376,"c":225,"g":88,"t":349,"other":0,"gcPercent":30.154,"gcSkew":-0.4377,"atSkew":0.03724,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"COX1","lengthBp":1544,"a":469,"c":316,"g":231,"t":528,"other":0,"gcPercent":35.427,"gcSkew":-0.15539,"atSkew":-0.05918,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"COX2","lengthBp":688,"a":238,"c":150,"g":88,"t":212,"other":0,"gcPercent":34.593,"gcSkew":-0.2605,"atSkew":0.05778,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ATP8","lengthBp":165,"a":67,"c":33,"g":12,"t":53,"other":0,"gcPercent":27.273,"gcSkew":-0.46667,"atSkew":0.11667,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ATP6","lengthBp":684,"a":227,"c":148,"g":66,"t":243,"other":0,"gcPercent":31.287,"gcSkew":-0.38318,"atSkew":-0.03404,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"COX3","lengthBp":784,"a":229,"c":163,"g":120,"t":272,"other":0,"gcPercent":36.097,"gcSkew":-0.15194,"atSkew":-0.08583,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND3","lengthBp":348,"a":115,"c":69,"g":42,"t":122,"other":0,"gcPercent":31.897,"gcSkew":-0.24324,"atSkew":-0.02954,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND4L","lengthBp":297,"a":85,"c":68,"g":35,"t":109,"other":0,"gcPercent":34.68,"gcSkew":-0.32039,"atSkew":-0.12371,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND4","lengthBp":1372,"a":457,"c":295,"g":144,"t":476,"other":0,"gcPercent":31.997,"gcSkew":-0.34396,"atSkew":-0.02036,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND5","lengthBp":1812,"a":636,"c":367,"g":184,"t":625,"other":0,"gcPercent":30.408,"gcSkew":-0.33212,"atSkew":0.00872,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND6","lengthBp":519,"a":234,"c":126,"g":50,"t":109,"other":0,"gcPercent":33.911,"gcSkew":-0.43182,"atSkew":0.36443,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"CYTB","lengthBp":1141,"a":369,"c":256,"g":140,"t":376,"other":0,"gcPercent":34.706,"gcSkew":-0.29293,"atSkew":-0.0094,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}}],"codonUsage":[{"speciesId":971,"region":"ND1","counts":{"UUU":19,"UUC":4,"UUA":29,"UUG":2,"UCU":2,"UCC":7,"UCA":12,"UCG":0,"UAU":7,"UAC":2,"UAA":0,"UAG":1,"UGU":0,"UGC":1,"UGA":7,"UGG":0,"CUU":13,"CUC":7,"CUA":8,"CUG":0,"CCU":5,"CCC":1,"CCA":15,"CCG":1,"CAU":3,"CAC":3,"CAA":5,"CAG":2,"CGU":0,"CGC":2,"CGA":6,"CGG":0,"AUU":18,"AUC":6,"AUA":16,"AUG":4,"ACU":5,"ACC":4,"ACA":13,"ACG":0,"AAU":9,"AAC":6,"AAA":6,"AAG":1,"AGU":1,"AGC":1,"AGA":0,"AGG":0,"GUU":8,"GUC":2,"GUA":4,"GUG":1,"GCU":4,"GCC":10,"GCA":9,"GCG":1,"GAU":2,"GAC":1,"GAA":10,"GAG":1,"GGU":2,"GGC":3,"GGA":11,"GGG":1},"aminoAcids":{"A":24,"C":1,"D":3,"E":11,"F":23,"G":17,"H":6,"I":24,"K":7,"L":59,"M":20,"N":15,"P":22,"Q":7,"R":8,"S":23,"T":22,"V":15,"W":7,"Y":9,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND2","counts":{"UUU":9,"UUC":2,"UUA":30,"UUG":0,"UCU":6,"UCC":4,"UCA":14,"UCG":1,"UAU":5,"UAC":2,"UAA":1,"UAG":0,"UGU":1,"UGC":0,"UGA":11,"UGG":0,"CUU":15,"CUC":4,"CUA":20,"CUG":0,"CCU":6,"CCC":2,"CCA":13,"CCG":0,"CAU":0,"CAC":5,"CAA":11,"CAG":0,"CGU":2,"CGC":0,"CGA":1,"CGG":0,"AUU":29,"AUC":3,"AUA":34,"AUG":1,"ACU":9,"ACC":5,"ACA":15,"ACG":0,"AAU":11,"AAC":6,"AAA":10,"AAG":1,"AGU":2,"AGC":3,"AGA":0,"AGG":0,"GUU":4,"GUC":0,"GUA":3,"GUG":0,"GCU":6,"GCC":9,"GCA":9,"GCG":0,"GAU":1,"GAC":1,"GAA":6,"GAG":0,"GGU":3,"GGC":1,"GGA":9,"GGG":0},"aminoAcids":{"A":24,"C":1,"D":2,"E":6,"F":11,"G":13,"H":5,"I":32,"K":11,"L":69,"M":35,"N":17,"P":21,"Q":11,"R":3,"S":30,"T":29,"V":7,"W":11,"Y":7,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"COX1","counts":{"UUU":29,"UUC":10,"UUA":22,"UUG":0,"UCU":7,"UCC":4,"UCA":20,"UCG":0,"UAU":17,"UAC":2,"UAA":0,"UAG":0,"UGU":0,"UGC":1,"UGA":17,"UGG":0,"CUU":22,"CUC":5,"CUA":12,"CUG":1,"CCU":2,"CCC":4,"CCA":22,"CCG":0,"CAU":14,"CAC":5,"CAA":6,"CAG":1,"CGU":1,"CGC":0,"CGA":7,"CGG":0,"AUU":34,"AUC":5,"AUA":32,"AUG":0,"ACU":14,"ACC":6,"ACA":18,"ACG":0,"AAU":8,"AAC":7,"AAA":8,"AAG":0,"AGU":2,"AGC":2,"AGA":0,"AGG":0,"GUU":12,"GUC":3,"GUA":19,"GUG":1,"GCU":12,"GCC":12,"GCA":17,"GCG":0,"GAU":9,"GAC":6,"GAA":9,"GAG":1,"GGU":8,"GGC":4,"GGA":30,"GGG":4},"aminoAcids":{"A":41,"C":1,"D":15,"E":10,"F":39,"G":46,"H":19,"I":39,"K":8,"L":62,"M":32,"N":15,"P":28,"Q":7,"R":8,"S":35,"T":38,"V":35,"W":17,"Y":19,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"COX2","counts":{"UUU":9,"UUC":1,"UUA":9,"UUG":0,"UCU":5,"UCC":3,"UCA":5,"UCG":2,"UAU":7,"UAC":1,"UAA":0,"UAG":0,"UGU":1,"UGC":1,"UGA":5,"UGG":0,"CUU":6,"CUC":4,"CUA":4,"CUG":0,"CCU":2,"CCC":2,"CCA":9,"CCG":0,"CAU":4,"CAC":4,"CAA":10,"CAG":0,"CGU":1,"CGC":0,"CGA":5,"CGG":0,"AUU":18,"AUC":4,"AUA":17,"AUG":1,"ACU":4,"ACC":2,"ACA":8,"ACG":1,"AAU":5,"AAC":4,"AAA":3,"AAG":0,"AGU":1,"AGC":3,"AGA":0,"AGG":0,"GUU":5,"GUC":0,"GUA":7,"GUG":0,"GCU":3,"GCC":7,"GCA":5,"GCG":0,"GAU":5,"GAC":5,"GAA":12,"GAG":1,"GGU":1,"GGC":0,"GGA":7,"GGG":0},"aminoAcids":{"A":15,"C":2,"D":10,"E":13,"F":10,"G":8,"H":8,"I":22,"K":3,"L":23,"M":18,"N":9,"P":13,"Q":10,"R":6,"S":19,"T":15,"V":12,"W":5,"Y":8,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ATP8","counts":{"UUU":2,"UUC":1,"UUA":5,"UUG":0,"UCU":0,"UCC":1,"UCA":1,"UCG":0,"UAU":0,"UAC":1,"UAA":1,"UAG":0,"UGU":0,"UGC":0,"UGA":5,"UGG":0,"CUU":1,"CUC":1,"CUA":0,"CUG":1,"CCU":2,"CCC":1,"CCA":3,"CCG":0,"CAU":0,"CAC":0,"CAA":3,"CAG":0,"CGU":0,"CGC":0,"CGA":0,"CGG":0,"AUU":5,"AUC":0,"AUA":1,"AUG":2,"ACU":0,"ACC":1,"ACA":4,"ACG":0,"AAU":7,"AAC":1,"AAA":3,"AAG":0,"AGU":0,"AGC":0,"AGA":0,"AGG":0,"GUU":0,"GUC":0,"GUA":0,"GUG":0,"GCU":0,"GCC":0,"GCA":0,"GCG":0,"GAU":0,"GAC":0,"GAA":0,"GAG":1,"GGU":0,"GGC":1,"GGA":0,"GGG":0},"aminoAcids":{"A":0,"C":0,"D":0,"E":1,"F":3,"G":1,"H":0,"I":5,"K":3,"L":8,"M":3,"N":8,"P":6,"Q":3,"R":0,"S":2,"T":5,"V":0,"W":5,"Y":1,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ATP6","counts":{"UUU":7,"UUC":2,"UUA":33,"UUG":0,"UCU":5,"UCC":1,"UCA":3,"UCG":0,"UAU":3,"UAC":0,"UAA":1,"UAG":0,"UGU":0,"UGC":1,"UGA":5,"UGG":0,"CUU":11,"CUC":6,"CUA":12,"CUG":0,"CCU":0,"CCC":1,"CCA":14,"CCG":0,"CAU":2,"CAC":1,"CAA":8,"CAG":0,"CGU":0,"CGC":1,"CGA":3,"CGG":0,"AUU":16,"AUC":3,"AUA":10,"AUG":1,"ACU":5,"ACC":4,"ACA":11,"ACG":0,"AAU":8,"AAC":5,"AAA":2,"AAG":1,"AGU":2,"AGC":2,"AGA":0,"AGG":0,"GUU":7,"GUC":0,"GUA":3,"GUG":1,"GCU":1,"GCC":4,"GCA":6,"GCG":1,"GAU":1,"GAC":0,"GAA":4,"GAG":0,"GGU":2,"GGC":2,"GGA":6,"GGG":0},"aminoAcids":{"A":12,"C":1,"D":1,"E":4,"F":9,"G":10,"H":3,"I":19,"K":3,"L":62,"M":11,"N":13,"P":15,"Q":8,"R":4,"S":13,"T":20,"V":11,"W":5,"Y":3,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"COX3","counts":{"UUU":22,"UUC":3,"UUA":17,"UUG":0,"UCU":5,"UCC":2,"UCA":4,"UCG":0,"UAU":7,"UAC":2,"UAA":0,"UAG":0,"UGU":0,"UGC":2,"UGA":10,"UGG":2,"CUU":6,"CUC":1,"CUA":7,"CUG":0,"CCU":4,"CCC":1,"CCA":7,"CCG":0,"CAU":7,"CAC":7,"CAA":7,"CAG":0,"CGU":1,"CGC":1,"CGA":3,"CGG":0,"AUU":16,"AUC":3,"AUA":9,"AUG":1,"ACU":6,"ACC":4,"ACA":8,"ACG":0,"AAU":5,"AAC":2,"AAA":2,"AAG":0,"AGU":1,"AGC":3,"AGA":0,"AGG":0,"GUU":8,"GUC":2,"GUA":5,"GUG":2,"GCU":3,"GCC":7,"GCA":13,"GCG":0,"GAU":2,"GAC":3,"GAA":9,"GAG":1,"GGU":0,"GGC":4,"GGA":14,"GGG":0},"aminoAcids":{"A":23,"C":2,"D":5,"E":10,"F":25,"G":18,"H":14,"I":19,"K":2,"L":31,"M":10,"N":7,"P":12,"Q":7,"R":5,"S":15,"T":18,"V":17,"W":12,"Y":9,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND3","counts":{"UUU":7,"UUC":1,"UUA":11,"UUG":0,"UCU":0,"UCC":1,"UCA":5,"UCG":0,"UAU":2,"UAC":0,"UAA":1,"UAG":0,"UGU":0,"UGC":1,"UGA":5,"UGG":0,"CUU":4,"CUC":1,"CUA":3,"CUG":1,"CCU":0,"CCC":2,"CCA":6,"CCG":0,"CAU":0,"CAC":0,"CAA":2,"CAG":0,"CGU":0,"CGC":1,"CGA":1,"CGG":0,"AUU":13,"AUC":0,"AUA":8,"AUG":1,"ACU":3,"ACC":4,"ACA":3,"ACG":0,"AAU":2,"AAC":1,"AAA":1,"AAG":0,"AGU":0,"AGC":0,"AGA":0,"AGG":0,"GUU":1,"GUC":2,"GUA":1,"GUG":0,"GCU":0,"GCC":2,"GCA":4,"GCG":0,"GAU":2,"GAC":1,"GAA":5,"GAG":1,"GGU":0,"GGC":1,"GGA":5,"GGG":0},"aminoAcids":{"A":6,"C":1,"D":3,"E":6,"F":8,"G":6,"H":0,"I":13,"K":1,"L":20,"M":9,"N":3,"P":8,"Q":2,"R":2,"S":6,"T":10,"V":4,"W":5,"Y":2,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND4L","counts":{"UUU":5,"UUC":1,"UUA":12,"UUG":1,"UCU":3,"UCC":2,"UCA":3,"UCG":0,"UAU":2,"UAC":0,"UAA":1,"UAG":0,"UGU":2,"UGC":1,"UGA":0,"UGG":1,"CUU":5,"CUC":4,"CUA":2,"CUG":1,"CCU":1,"CCC":0,"CCA":1,"CCG":0,"CAU":0,"CAC":3,"CAA":3,"CAG":0,"CGU":0,"CGC":1,"CGA":1,"CGG":0,"AUU":3,"AUC":0,"AUA":6,"AUG":2,"ACU":3,"ACC":1,"ACA":5,"ACG":0,"AAU":3,"AAC":0,"AAA":1,"AAG":0,"AGU":1,"AGC":1,"AGA":0,"AGG":0,"GUU":0,"GUC":1,"GUA":1,"GUG":0,"GCU":2,"GCC":3,"GCA":2,"GCG":0,"GAU":1,"GAC":0,"GAA":2,"GAG":1,"GGU":0,"GGC":2,"GGA":2,"GGG":0},"aminoAcids":{"A":7,"C":3,"D":1,"E":3,"F":6,"G":4,"H":3,"I":3,"K":1,"L":25,"M":8,"N":3,"P":2,"Q":3,"R":2,"S":10,"T":9,"V":2,"W":1,"Y":2,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND4","counts":{"UUU":18,"UUC":3,"UUA":38,"UUG":3,"UCU":6,"UCC":5,"UCA":13,"UCG":0,"UAU":6,"UAC":6,"UAA":0,"UAG":0,"UGU":5,"UGC":2,"UGA":12,"UGG":2,"CUU":20,"CUC":4,"CUA":22,"CUG":1,"CCU":6,"CCC":0,"CCA":17,"CCG":1,"CAU":7,"CAC":4,"CAA":10,"CAG":0,"CGU":3,"CGC":0,"CGA":7,"CGG":0,"AUU":41,"AUC":5,"AUA":28,"AUG":4,"ACU":10,"ACC":12,"ACA":24,"ACG":1,"AAU":6,"AAC":13,"AAA":12,"AAG":0,"AGU":4,"AGC":2,"AGA":0,"AGG":0,"GUU":7,"GUC":1,"GUA":6,"GUG":0,"GCU":11,"GCC":9,"GCA":5,"GCG":0,"GAU":1,"GAC":2,"GAA":11,"GAG":0,"GGU":4,"GGC":5,"GGA":12,"GGG":0},"aminoAcids":{"A":25,"C":7,"D":3,"E":11,"F":21,"G":21,"H":11,"I":46,"K":12,"L":88,"M":32,"N":19,"P":24,"Q":10,"R":10,"S":30,"T":47,"V":14,"W":14,"Y":12,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND5","counts":{"UUU":32,"UUC":12,"UUA":40,"UUG":2,"UCU":10,"UCC":13,"UCA":17,"UCG":0,"UAU":8,"UAC":3,"UAA":1,"UAG":0,"UGU":4,"UGC":3,"UGA":12,"UGG":0,"CUU":16,"CUC":3,"CUA":20,"CUG":3,"CCU":8,"CCC":1,"CCA":20,"CCG":0,"CAU":3,"CAC":5,"CAA":20,"CAG":1,"CGU":1,"CGC":0,"CGA":8,"CGG":0,"AUU":58,"AUC":13,"AUA":43,"AUG":3,"ACU":15,"ACC":11,"ACA":23,"ACG":1,"AAU":24,"AAC":10,"AAA":23,"AAG":2,"AGU":7,"AGC":3,"AGA":0,"AGG":0,"GUU":5,"GUC":2,"GUA":8,"GUG":0,"GCU":11,"GCC":9,"GCA":18,"GCG":0,"GAU":3,"GAC":7,"GAA":10,"GAG":1,"GGU":3,"GGC":6,"GGA":16,"GGG":3},"aminoAcids":{"A":38,"C":7,"D":10,"E":11,"F":44,"G":28,"H":8,"I":71,"K":25,"L":84,"M":46,"N":34,"P":29,"Q":21,"R":9,"S":50,"T":50,"V":15,"W":12,"Y":11,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"ND6","counts":{"UUU":9,"UUC":1,"UUA":13,"UUG":9,"UCU":10,"UCC":0,"UCA":2,"UCG":0,"UAU":11,"UAC":0,"UAA":0,"UAG":0,"UGU":2,"UGC":1,"UGA":4,"UGG":1,"CUU":4,"CUC":0,"CUA":3,"CUG":0,"CCU":2,"CCC":0,"CCA":1,"CCG":0,"CAU":0,"CAC":0,"CAA":0,"CAG":0,"CGU":1,"CGC":0,"CGA":0,"CGG":2,"AUU":13,"AUC":0,"AUA":8,"AUG":1,"ACU":2,"ACC":0,"ACA":1,"ACG":1,"AAU":2,"AAC":0,"AAA":0,"AAG":0,"AGU":6,"AGC":0,"AGA":0,"AGG":1,"GUU":9,"GUC":1,"GUA":6,"GUG":6,"GCU":7,"GCC":2,"GCA":3,"GCG":0,"GAU":3,"GAC":1,"GAA":2,"GAG":2,"GGU":7,"GGC":0,"GGA":10,"GGG":3},"aminoAcids":{"A":12,"C":3,"D":4,"E":4,"F":10,"G":20,"H":0,"I":13,"K":0,"L":29,"M":9,"N":2,"P":3,"Q":0,"R":3,"S":18,"T":4,"V":22,"W":5,"Y":11,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"CYTB","counts":{"UUU":19,"UUC":12,"UUA":19,"UUG":0,"UCU":2,"UCC":6,"UCA":16,"UCG":1,"UAU":11,"UAC":4,"UAA":0,"UAG":0,"UGU":2,"UGC":1,"UGA":11,"UGG":0,"CUU":14,"CUC":2,"CUA":14,"CUG":1,"CCU":1,"CCC":0,"CCA":22,"CCG":1,"CAU":5,"CAC":8,"CAA":4,"CAG":3,"CGU":0,"CGC":2,"CGA":6,"CGG":0,"AUU":33,"AUC":8,"AUA":16,"AUG":2,"ACU":4,"ACC":8,"ACA":11,"ACG":1,"AAU":10,"AAC":9,"AAA":10,"AAG":0,"AGU":2,"AGC":1,"AGA":0,"AGG":0,"GUU":5,"GUC":0,"GUA":11,"GUG":0,"GCU":4,"GCC":7,"GCA":10,"GCG":1,"GAU":2,"GAC":6,"GAA":7,"GAG":0,"GGU":1,"GGC":4,"GGA":18,"GGG":2},"aminoAcids":{"A":22,"C":3,"D":8,"E":7,"F":31,"G":25,"H":13,"I":41,"K":10,"L":50,"M":18,"N":19,"P":24,"Q":7,"R":8,"S":28,"T":24,"V":16,"W":11,"Y":15,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"speciesId":971,"region":"total_pc","counts":{"UUU":187,"UUC":53,"UUA":278,"UUG":17,"UCU":61,"UCC":49,"UCA":115,"UCG":4,"UAU":86,"UAC":23,"UAA":6,"UAG":1,"UGU":17,"UGC":15,"UGA":104,"UGG":6,"CUU":137,"CUC":42,"CUA":127,"CUG":9,"CCU":39,"CCC":15,"CCA":150,"CCG":3,"CAU":45,"CAC":45,"CAA":89,"CAG":7,"CGU":10,"CGC":8,"CGA":48,"CGG":2,"AUU":297,"AUC":50,"AUA":228,"AUG":23,"ACU":80,"ACC":62,"ACA":144,"ACG":5,"AAU":100,"AAC":64,"AAA":81,"AAG":5,"AGU":29,"AGC":21,"AGA":0,"AGG":1,"GUU":71,"GUC":14,"GUA":74,"GUG":11,"GCU":64,"GCC":81,"GCA":101,"GCG":3,"GAU":32,"GAC":33,"GAA":87,"GAG":10,"GGU":31,"GGC":33,"GGA":140,"GGG":13},"aminoAcids":{"A":249,"C":32,"D":65,"E":97,"F":240,"G":217,"H":90,"I":347,"K":86,"L":610,"M":251,"N":164,"P":207,"Q":96,"R":68,"S":279,"T":291,"V":170,"W":110,"Y":109,"*":8},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}}],"genomeFeatures":[{"name":"tRNA-Phe","type":"tRNA","start":1,"end":70,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"rRNA-12S","type":"rRNA","start":71,"end":994,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Val","type":"tRNA","start":995,"end":1064,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"rRNA-16S","type":"rRNA","start":1065,"end":2612,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Leu(UUR)","type":"tRNA","start":2613,"end":2687,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"ND1","type":"CDS","start":2688,"end":3659,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Ile","type":"tRNA","start":3659,"end":3730,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Gln","type":"tRNA","start":3729,"end":3799,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Met","type":"tRNA","start":3799,"end":3866,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"ND2","type":"CDS","start":3867,"end":4904,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Trp","type":"tRNA","start":4903,"end":4972,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Ala","type":"tRNA","start":4975,"end":5043,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Asn","type":"tRNA","start":5045,"end":5119,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Cys","type":"tRNA","start":5153,"end":5220,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Tyr","type":"tRNA","start":5219,"end":5287,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"COX1","type":"CDS","start":5289,"end":6832,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Ser(UCN)","type":"tRNA","start":6838,"end":6908,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Asp","type":"tRNA","start":6909,"end":6978,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"COX2","type":"CDS","start":6980,"end":7667,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Lys","type":"tRNA","start":7668,"end":7739,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"ATP8","type":"CDS","start":7741,"end":7905,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"ATP6","type":"CDS","start":7896,"end":8579,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"COX3","type":"CDS","start":8579,"end":9362,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Gly","type":"tRNA","start":9363,"end":9429,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"ND3","type":"CDS","start":9430,"end":9777,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Arg","type":"tRNA","start":9776,"end":9843,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"ND4L","type":"CDS","start":9844,"end":10140,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"ND4","type":"CDS","start":10134,"end":11505,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-His","type":"tRNA","start":11506,"end":11574,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Ser(AGY)","type":"tRNA","start":11575,"end":11641,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Leu(CUN)","type":"tRNA","start":11642,"end":11712,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"ND5","type":"CDS","start":11713,"end":13524,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"ND6","type":"CDS","start":13510,"end":14028,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Glu","type":"tRNA","start":14029,"end":14096,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"CYTB","type":"CDS","start":14101,"end":15241,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Thr","type":"tRNA","start":15242,"end":15310,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"tRNA-Pro","type":"tRNA","start":15473,"end":15545,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}},{"name":"D_Loop","type":"D-loop","start":15546,"end":16294,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_006344.1"}}]}