{"species":{"id":679,"slug":"polypterus-senegalus","refseq":"NC_004418.1","scientificName":"Polypterus senegalus","commonName":"Gray bichir","taxonomy":{"kingdom":"Animalia","phylum":"Chordata","class":"Actinopterygii","order":"Polypteriformes","family":"Polypteridae","genus":"Polypterus"},"maxLongevityYears":34,"mtdnaSizeBp":16627,"nonCodingBp":1126,"gcPercent":40.031,"traits":{"adultWeightG":null,"birthWeightG":null,"metabolicRateW":null,"bodyTemperatureK":null,"femaleMaturityDays":null,"maleMaturityDays":null,"gestationDays":null,"litterSize":null,"littersPerYear":null,"growthRatePerDay":null,"source":"AnAge Build 15 (HAGRID 01878)"},"legacyId":17745,"ncbiTaxid":178879,"ncbiSpeciesTaxid":55291,"previousScientificNames":[],"retiredReason":null,"reviewFlags":[],"changeKinds":[],"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1; AnAge build 15 (2023-07-03)"},"lifespan":{"source":"AnAge","sourceVersion":"AnAge build 15 (2023-07-03)","sourceRecordId":"01878","quality":"acceptable","sampleSize":"medium","recordType":"captive","license":"Free to use, subject to the Human Ageing Genomic Resources conditions of use (https://genomics.senescence.info/legal.html); cite Tacutu et al. 2013, Nucleic Acids Res 41:D1027-D1033"}},"regions":[{"speciesId":679,"region":"total_mtDNA","lengthBp":16627,"a":5203,"c":4256,"g":2400,"t":4768,"other":0,"gcPercent":40.031,"gcSkew":-0.27885,"atSkew":0.04363,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"total_pc","lengthBp":11362,"a":3414,"c":3045,"g":1490,"t":3413,"other":0,"gcPercent":39.914,"gcSkew":-0.34289,"atSkew":0.00015,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"total_rRNA","lengthBp":2602,"a":917,"c":574,"g":511,"t":600,"other":0,"gcPercent":41.699,"gcSkew":-0.05806,"atSkew":0.20897,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"total_tRNA","lengthBp":1547,"a":508,"c":358,"g":265,"t":416,"other":0,"gcPercent":40.271,"gcSkew":-0.14928,"atSkew":0.09957,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"rRNA-12S","lengthBp":947,"a":300,"c":226,"g":202,"t":219,"other":0,"gcPercent":45.195,"gcSkew":-0.05607,"atSkew":0.15607,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"rRNA-16S","lengthBp":1655,"a":617,"c":348,"g":309,"t":381,"other":0,"gcPercent":39.698,"gcSkew":-0.05936,"atSkew":0.23647,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"D_Loop","lengthBp":1073,"a":352,"c":267,"g":126,"t":328,"other":0,"gcPercent":36.626,"gcSkew":-0.35878,"atSkew":0.03529,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND1","lengthBp":959,"a":277,"c":277,"g":118,"t":287,"other":0,"gcPercent":41.189,"gcSkew":-0.40253,"atSkew":-0.01773,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND2","lengthBp":1036,"a":328,"c":295,"g":118,"t":295,"other":0,"gcPercent":39.865,"gcSkew":-0.42857,"atSkew":0.05297,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"COX1","lengthBp":1557,"a":417,"c":396,"g":270,"t":474,"other":0,"gcPercent":42.775,"gcSkew":-0.18919,"atSkew":-0.06397,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"COX2","lengthBp":691,"a":225,"c":173,"g":97,"t":196,"other":0,"gcPercent":39.074,"gcSkew":-0.28148,"atSkew":0.06888,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ATP8","lengthBp":168,"a":56,"c":44,"g":15,"t":53,"other":0,"gcPercent":35.119,"gcSkew":-0.49153,"atSkew":0.02752,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ATP6","lengthBp":683,"a":206,"c":177,"g":74,"t":226,"other":0,"gcPercent":36.75,"gcSkew":-0.41036,"atSkew":-0.0463,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"COX3","lengthBp":785,"a":213,"c":206,"g":132,"t":234,"other":0,"gcPercent":43.057,"gcSkew":-0.21893,"atSkew":-0.04698,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND3","lengthBp":346,"a":91,"c":94,"g":47,"t":114,"other":0,"gcPercent":40.751,"gcSkew":-0.33333,"atSkew":-0.1122,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND4L","lengthBp":297,"a":76,"c":91,"g":37,"t":93,"other":0,"gcPercent":43.098,"gcSkew":-0.42187,"atSkew":-0.10059,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND4","lengthBp":1375,"a":418,"c":359,"g":165,"t":433,"other":0,"gcPercent":38.109,"gcSkew":-0.37023,"atSkew":-0.01763,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND5","lengthBp":1842,"a":580,"c":477,"g":215,"t":570,"other":0,"gcPercent":37.568,"gcSkew":-0.37861,"atSkew":0.0087,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND6","lengthBp":504,"a":209,"c":145,"g":58,"t":92,"other":0,"gcPercent":40.278,"gcSkew":-0.42857,"atSkew":0.3887,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"CYTB","lengthBp":1141,"a":328,"c":314,"g":146,"t":353,"other":0,"gcPercent":40.316,"gcSkew":-0.36522,"atSkew":-0.03671,"source":"genbank","provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}}],"codonUsage":[{"speciesId":679,"region":"ND1","counts":{"UUU":10,"UUC":8,"UUA":12,"UUG":0,"UCU":5,"UCC":6,"UCA":9,"UCG":0,"UAU":7,"UAC":3,"UAA":0,"UAG":0,"UGU":0,"UGC":0,"UGA":9,"UGG":0,"CUU":10,"CUC":19,"CUA":20,"CUG":2,"CCU":4,"CCC":6,"CCA":11,"CCG":1,"CAU":1,"CAC":1,"CAA":5,"CAG":1,"CGU":0,"CGC":2,"CGA":5,"CGG":0,"AUU":21,"AUC":9,"AUA":9,"AUG":1,"ACU":2,"ACC":10,"ACA":11,"ACG":2,"AAU":9,"AAC":4,"AAA":8,"AAG":0,"AGU":0,"AGC":1,"AGA":0,"AGG":0,"GUU":3,"GUC":2,"GUA":9,"GUG":1,"GCU":6,"GCC":10,"GCA":14,"GCG":0,"GAU":1,"GAC":3,"GAA":10,"GAG":0,"GGU":2,"GGC":8,"GGA":4,"GGG":2},"aminoAcids":{"A":30,"C":0,"D":4,"E":10,"F":18,"G":16,"H":2,"I":30,"K":8,"L":63,"M":10,"N":13,"P":22,"Q":6,"R":7,"S":21,"T":25,"V":15,"W":9,"Y":10,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND2","counts":{"UUU":9,"UUC":6,"UUA":13,"UUG":1,"UCU":6,"UCC":9,"UCA":6,"UCG":0,"UAU":3,"UAC":5,"UAA":0,"UAG":0,"UGU":0,"UGC":0,"UGA":9,"UGG":2,"CUU":10,"CUC":11,"CUA":18,"CUG":3,"CCU":6,"CCC":5,"CCA":7,"CCG":0,"CAU":2,"CAC":5,"CAA":11,"CAG":1,"CGU":0,"CGC":1,"CGA":3,"CGG":0,"AUU":27,"AUC":10,"AUA":23,"AUG":3,"ACU":6,"ACC":12,"ACA":20,"ACG":0,"AAU":5,"AAC":9,"AAA":7,"AAG":1,"AGU":0,"AGC":6,"AGA":0,"AGG":0,"GUU":5,"GUC":1,"GUA":1,"GUG":1,"GCU":4,"GCC":16,"GCA":11,"GCG":0,"GAU":0,"GAC":1,"GAA":5,"GAG":0,"GGU":0,"GGC":7,"GGA":10,"GGG":2},"aminoAcids":{"A":31,"C":0,"D":1,"E":5,"F":15,"G":19,"H":7,"I":37,"K":8,"L":56,"M":26,"N":14,"P":18,"Q":12,"R":4,"S":27,"T":38,"V":8,"W":11,"Y":8,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"COX1","counts":{"UUU":17,"UUC":22,"UUA":14,"UUG":3,"UCU":7,"UCC":10,"UCA":10,"UCG":0,"UAU":13,"UAC":7,"UAA":0,"UAG":0,"UGU":0,"UGC":1,"UGA":17,"UGG":0,"CUU":14,"CUC":10,"CUA":16,"CUG":5,"CCU":6,"CCC":7,"CCA":16,"CCG":0,"CAU":7,"CAC":12,"CAA":8,"CAG":1,"CGU":0,"CGC":3,"CGA":5,"CGG":1,"AUU":33,"AUC":7,"AUA":25,"AUG":3,"ACU":9,"ACC":14,"ACA":13,"ACG":2,"AAU":7,"AAC":8,"AAA":7,"AAG":0,"AGU":0,"AGC":3,"AGA":0,"AGG":1,"GUU":8,"GUC":7,"GUA":16,"GUG":6,"GCU":8,"GCC":19,"GCA":16,"GCG":1,"GAU":10,"GAC":4,"GAA":9,"GAG":3,"GGU":8,"GGC":13,"GGA":17,"GGG":10},"aminoAcids":{"A":44,"C":1,"D":14,"E":12,"F":39,"G":48,"H":19,"I":40,"K":7,"L":62,"M":28,"N":15,"P":29,"Q":9,"R":9,"S":30,"T":38,"V":37,"W":17,"Y":20,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"COX2","counts":{"UUU":5,"UUC":4,"UUA":8,"UUG":1,"UCU":3,"UCC":3,"UCA":9,"UCG":0,"UAU":5,"UAC":3,"UAA":0,"UAG":0,"UGU":0,"UGC":2,"UGA":5,"UGG":0,"CUU":9,"CUC":1,"CUA":9,"CUG":1,"CCU":5,"CCC":3,"CCA":6,"CCG":0,"CAU":3,"CAC":6,"CAA":7,"CAG":1,"CGU":0,"CGC":1,"CGA":4,"CGG":1,"AUU":12,"AUC":5,"AUA":8,"AUG":4,"ACU":2,"ACC":3,"ACA":13,"ACG":0,"AAU":4,"AAC":3,"AAA":5,"AAG":0,"AGU":0,"AGC":3,"AGA":0,"AGG":0,"GUU":7,"GUC":2,"GUA":4,"GUG":1,"GCU":4,"GCC":5,"GCA":8,"GCG":0,"GAU":6,"GAC":6,"GAA":12,"GAG":0,"GGU":1,"GGC":2,"GGA":4,"GGG":1},"aminoAcids":{"A":17,"C":2,"D":12,"E":12,"F":9,"G":8,"H":9,"I":17,"K":5,"L":29,"M":12,"N":7,"P":14,"Q":8,"R":6,"S":18,"T":18,"V":14,"W":5,"Y":8,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ATP8","counts":{"UUU":3,"UUC":0,"UUA":2,"UUG":0,"UCU":0,"UCC":1,"UCA":1,"UCG":0,"UAU":0,"UAC":0,"UAA":1,"UAG":0,"UGU":0,"UGC":0,"UGA":5,"UGG":0,"CUU":3,"CUC":1,"CUA":1,"CUG":0,"CCU":2,"CCC":2,"CCA":3,"CCG":1,"CAU":1,"CAC":1,"CAA":1,"CAG":0,"CGU":0,"CGC":0,"CGA":0,"CGG":0,"AUU":5,"AUC":1,"AUA":1,"AUG":1,"ACU":3,"ACC":1,"ACA":2,"ACG":0,"AAU":2,"AAC":1,"AAA":2,"AAG":1,"AGU":0,"AGC":1,"AGA":0,"AGG":0,"GUU":1,"GUC":1,"GUA":0,"GUG":0,"GCU":0,"GCC":0,"GCA":0,"GCG":0,"GAU":0,"GAC":2,"GAA":2,"GAG":0,"GGU":0,"GGC":0,"GGA":0,"GGG":0},"aminoAcids":{"A":0,"C":0,"D":2,"E":2,"F":3,"G":0,"H":2,"I":6,"K":3,"L":7,"M":2,"N":3,"P":8,"Q":1,"R":0,"S":3,"T":6,"V":2,"W":5,"Y":0,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ATP6","counts":{"UUU":9,"UUC":2,"UUA":14,"UUG":1,"UCU":3,"UCC":1,"UCA":0,"UCG":0,"UAU":2,"UAC":1,"UAA":0,"UAG":0,"UGU":0,"UGC":0,"UGA":5,"UGG":0,"CUU":11,"CUC":2,"CUA":23,"CUG":2,"CCU":2,"CCC":1,"CCA":11,"CCG":1,"CAU":3,"CAC":1,"CAA":9,"CAG":0,"CGU":0,"CGC":0,"CGA":6,"CGG":0,"AUU":18,"AUC":6,"AUA":7,"AUG":3,"ACU":9,"ACC":8,"ACA":8,"ACG":0,"AAU":7,"AAC":3,"AAA":2,"AAG":0,"AGU":1,"AGC":2,"AGA":0,"AGG":0,"GUU":4,"GUC":2,"GUA":5,"GUG":0,"GCU":5,"GCC":11,"GCA":4,"GCG":0,"GAU":1,"GAC":0,"GAA":4,"GAG":0,"GGU":3,"GGC":1,"GGA":0,"GGG":3},"aminoAcids":{"A":20,"C":0,"D":1,"E":4,"F":11,"G":7,"H":4,"I":24,"K":2,"L":53,"M":10,"N":10,"P":15,"Q":9,"R":6,"S":7,"T":25,"V":11,"W":5,"Y":3,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"COX3","counts":{"UUU":12,"UUC":10,"UUA":10,"UUG":0,"UCU":2,"UCC":3,"UCA":5,"UCG":0,"UAU":8,"UAC":3,"UAA":0,"UAG":0,"UGU":1,"UGC":0,"UGA":10,"UGG":2,"CUU":6,"CUC":4,"CUA":11,"CUG":4,"CCU":3,"CCC":3,"CCA":7,"CCG":0,"CAU":4,"CAC":11,"CAA":7,"CAG":0,"CGU":2,"CGC":0,"CGA":2,"CGG":1,"AUU":9,"AUC":5,"AUA":7,"AUG":3,"ACU":6,"ACC":6,"ACA":11,"ACG":1,"AAU":0,"AAC":1,"AAA":2,"AAG":1,"AGU":0,"AGC":3,"AGA":0,"AGG":0,"GUU":9,"GUC":2,"GUA":6,"GUG":0,"GCU":3,"GCC":10,"GCA":10,"GCG":0,"GAU":2,"GAC":3,"GAA":9,"GAG":0,"GGU":2,"GGC":7,"GGA":9,"GGG":3},"aminoAcids":{"A":23,"C":1,"D":5,"E":9,"F":22,"G":21,"H":15,"I":14,"K":3,"L":35,"M":10,"N":1,"P":13,"Q":7,"R":5,"S":13,"T":24,"V":17,"W":12,"Y":11,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND3","counts":{"UUU":6,"UUC":2,"UUA":7,"UUG":1,"UCU":2,"UCC":1,"UCA":5,"UCG":0,"UAU":0,"UAC":2,"UAA":0,"UAG":0,"UGU":0,"UGC":1,"UGA":2,"UGG":3,"CUU":4,"CUC":5,"CUA":8,"CUG":0,"CCU":2,"CCC":2,"CCA":4,"CCG":0,"CAU":0,"CAC":1,"CAA":2,"CAG":0,"CGU":0,"CGC":1,"CGA":1,"CGG":0,"AUU":6,"AUC":7,"AUA":4,"AUG":2,"ACU":1,"ACC":1,"ACA":2,"ACG":0,"AAU":0,"AAC":2,"AAA":1,"AAG":0,"AGU":0,"AGC":0,"AGA":0,"AGG":0,"GUU":1,"GUC":3,"GUA":0,"GUG":0,"GCU":0,"GCC":4,"GCA":3,"GCG":0,"GAU":1,"GAC":3,"GAA":6,"GAG":0,"GGU":2,"GGC":2,"GGA":2,"GGG":0},"aminoAcids":{"A":7,"C":1,"D":4,"E":6,"F":8,"G":6,"H":1,"I":13,"K":1,"L":25,"M":6,"N":2,"P":8,"Q":2,"R":2,"S":8,"T":4,"V":4,"W":5,"Y":2,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND4L","counts":{"UUU":3,"UUC":2,"UUA":6,"UUG":0,"UCU":2,"UCC":5,"UCA":3,"UCG":0,"UAU":0,"UAC":0,"UAA":1,"UAG":0,"UGU":2,"UGC":2,"UGA":1,"UGG":0,"CUU":5,"CUC":7,"CUA":7,"CUG":0,"CCU":0,"CCC":1,"CCA":0,"CCG":0,"CAU":1,"CAC":3,"CAA":2,"CAG":0,"CGU":1,"CGC":1,"CGA":0,"CGG":0,"AUU":1,"AUC":2,"AUA":5,"AUG":2,"ACU":4,"ACC":3,"ACA":2,"ACG":0,"AAU":2,"AAC":2,"AAA":1,"AAG":0,"AGU":1,"AGC":0,"AGA":0,"AGG":0,"GUU":1,"GUC":0,"GUA":0,"GUG":0,"GCU":0,"GCC":5,"GCA":3,"GCG":0,"GAU":1,"GAC":0,"GAA":2,"GAG":1,"GGU":1,"GGC":2,"GGA":2,"GGG":1},"aminoAcids":{"A":8,"C":4,"D":1,"E":3,"F":5,"G":6,"H":4,"I":3,"K":1,"L":25,"M":7,"N":4,"P":1,"Q":2,"R":2,"S":11,"T":9,"V":1,"W":1,"Y":0,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND4","counts":{"UUU":7,"UUC":7,"UUA":26,"UUG":1,"UCU":7,"UCC":14,"UCA":11,"UCG":1,"UAU":9,"UAC":7,"UAA":0,"UAG":0,"UGU":1,"UGC":4,"UGA":17,"UGG":1,"CUU":14,"CUC":9,"CUA":28,"CUG":2,"CCU":13,"CCC":3,"CCA":9,"CCG":0,"CAU":3,"CAC":8,"CAA":7,"CAG":1,"CGU":0,"CGC":4,"CGA":7,"CGG":0,"AUU":38,"AUC":12,"AUA":27,"AUG":3,"ACU":10,"ACC":16,"ACA":15,"ACG":1,"AAU":9,"AAC":6,"AAA":8,"AAG":1,"AGU":1,"AGC":5,"AGA":0,"AGG":0,"GUU":4,"GUC":2,"GUA":6,"GUG":1,"GCU":12,"GCC":12,"GCA":10,"GCG":1,"GAU":0,"GAC":3,"GAA":10,"GAG":1,"GGU":4,"GGC":4,"GGA":12,"GGG":3},"aminoAcids":{"A":35,"C":5,"D":3,"E":11,"F":14,"G":23,"H":11,"I":50,"K":9,"L":80,"M":30,"N":15,"P":25,"Q":8,"R":11,"S":39,"T":42,"V":13,"W":18,"Y":16,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND5","counts":{"UUU":19,"UUC":14,"UUA":29,"UUG":2,"UCU":13,"UCC":9,"UCA":12,"UCG":0,"UAU":9,"UAC":5,"UAA":1,"UAG":0,"UGU":2,"UGC":6,"UGA":9,"UGG":3,"CUU":27,"CUC":20,"CUA":22,"CUG":5,"CCU":9,"CCC":5,"CCA":11,"CCG":2,"CAU":5,"CAC":10,"CAA":20,"CAG":4,"CGU":3,"CGC":4,"CGA":3,"CGG":0,"AUU":41,"AUC":24,"AUA":28,"AUG":4,"ACU":8,"ACC":12,"ACA":26,"ACG":3,"AAU":20,"AAC":14,"AAA":24,"AAG":0,"AGU":1,"AGC":7,"AGA":0,"AGG":0,"GUU":7,"GUC":4,"GUA":9,"GUG":0,"GCU":11,"GCC":16,"GCA":20,"GCG":1,"GAU":3,"GAC":8,"GAA":8,"GAG":2,"GGU":4,"GGC":11,"GGA":13,"GGG":2},"aminoAcids":{"A":48,"C":8,"D":11,"E":10,"F":33,"G":30,"H":15,"I":65,"K":24,"L":105,"M":32,"N":34,"P":27,"Q":24,"R":10,"S":42,"T":49,"V":20,"W":12,"Y":14,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"ND6","counts":{"UUU":10,"UUC":1,"UUA":14,"UUG":5,"UCU":7,"UCC":0,"UCA":1,"UCG":0,"UAU":8,"UAC":2,"UAA":0,"UAG":0,"UGU":3,"UGC":0,"UGA":2,"UGG":2,"CUU":2,"CUC":0,"CUA":1,"CUG":1,"CCU":4,"CCC":0,"CCA":0,"CCG":1,"CAU":1,"CAC":0,"CAA":0,"CAG":1,"CGU":2,"CGC":0,"CGA":1,"CGG":2,"AUU":5,"AUC":1,"AUA":7,"AUG":4,"ACU":2,"ACC":0,"ACA":0,"ACG":0,"AAU":2,"AAC":0,"AAA":0,"AAG":0,"AGU":1,"AGC":0,"AGA":1,"AGG":0,"GUU":13,"GUC":1,"GUA":10,"GUG":5,"GCU":4,"GCC":3,"GCA":5,"GCG":5,"GAU":3,"GAC":0,"GAA":2,"GAG":3,"GGU":7,"GGC":2,"GGA":3,"GGG":8},"aminoAcids":{"A":17,"C":3,"D":3,"E":5,"F":11,"G":20,"H":1,"I":6,"K":0,"L":23,"M":11,"N":2,"P":5,"Q":1,"R":5,"S":9,"T":2,"V":29,"W":4,"Y":10,"*":1},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"CYTB","counts":{"UUU":14,"UUC":14,"UUA":14,"UUG":0,"UCU":3,"UCC":7,"UCA":14,"UCG":0,"UAU":6,"UAC":9,"UAA":0,"UAG":0,"UGU":0,"UGC":3,"UGA":12,"UGG":0,"CUU":14,"CUC":8,"CUA":12,"CUG":5,"CCU":4,"CCC":7,"CCA":12,"CCG":0,"CAU":5,"CAC":6,"CAA":4,"CAG":1,"CGU":3,"CGC":4,"CGA":2,"CGG":0,"AUU":28,"AUC":17,"AUA":11,"AUG":3,"ACU":7,"ACC":5,"ACA":7,"ACG":1,"AAU":4,"AAC":16,"AAA":10,"AAG":0,"AGU":0,"AGC":3,"AGA":0,"AGG":0,"GUU":4,"GUC":5,"GUA":9,"GUG":0,"GCU":2,"GCC":12,"GCA":14,"GCG":0,"GAU":3,"GAC":7,"GAA":6,"GAG":0,"GGU":1,"GGC":9,"GGA":12,"GGG":1},"aminoAcids":{"A":28,"C":3,"D":10,"E":6,"F":28,"G":23,"H":11,"I":45,"K":10,"L":53,"M":14,"N":20,"P":23,"Q":5,"R":9,"S":27,"T":20,"V":18,"W":12,"Y":15,"*":0},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"speciesId":679,"region":"total_pc","counts":{"UUU":124,"UUC":92,"UUA":169,"UUG":15,"UCU":60,"UCC":69,"UCA":86,"UCG":1,"UAU":70,"UAC":47,"UAA":3,"UAG":0,"UGU":9,"UGC":19,"UGA":103,"UGG":13,"CUU":129,"CUC":97,"CUA":176,"CUG":30,"CCU":60,"CCC":45,"CCA":97,"CCG":6,"CAU":36,"CAC":65,"CAA":83,"CAG":11,"CGU":11,"CGC":21,"CGA":39,"CGG":5,"AUU":244,"AUC":106,"AUA":162,"AUG":36,"ACU":69,"ACC":91,"ACA":130,"ACG":10,"AAU":71,"AAC":69,"AAA":77,"AAG":4,"AGU":5,"AGC":34,"AGA":1,"AGG":1,"GUU":67,"GUC":32,"GUA":75,"GUG":15,"GCU":59,"GCC":123,"GCA":118,"GCG":8,"GAU":31,"GAC":40,"GAA":85,"GAG":10,"GGU":35,"GGC":68,"GGA":88,"GGG":36},"aminoAcids":{"A":308,"C":28,"D":71,"E":95,"F":216,"G":227,"H":101,"I":350,"K":81,"L":616,"M":198,"N":140,"P":208,"Q":94,"R":76,"S":255,"T":300,"V":189,"W":116,"Y":117,"*":5},"translTable":2,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}}],"genomeFeatures":[{"name":"tRNA-Phe","type":"tRNA","start":1,"end":72,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"rRNA-12S","type":"rRNA","start":72,"end":1018,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Val","type":"tRNA","start":1019,"end":1089,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"rRNA-16S","type":"rRNA","start":1090,"end":2744,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Leu(UUR)","type":"tRNA","start":2745,"end":2819,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"ND1","type":"CDS","start":2820,"end":3778,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Ile","type":"tRNA","start":3779,"end":3849,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Gln","type":"tRNA","start":3848,"end":3918,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Met","type":"tRNA","start":3918,"end":3987,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"ND2","type":"CDS","start":3988,"end":5023,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Trp","type":"tRNA","start":5024,"end":5094,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Ala","type":"tRNA","start":5100,"end":5168,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Asn","type":"tRNA","start":5170,"end":5242,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Cys","type":"tRNA","start":5279,"end":5346,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Tyr","type":"tRNA","start":5347,"end":5417,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"COX1","type":"CDS","start":5419,"end":6975,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Ser(UCN)","type":"tRNA","start":6967,"end":7037,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Asp","type":"tRNA","start":7040,"end":7108,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"COX2","type":"CDS","start":7112,"end":7802,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Lys","type":"tRNA","start":7803,"end":7875,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"ATP8","type":"CDS","start":7876,"end":8043,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"ATP6","type":"CDS","start":8034,"end":8716,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"COX3","type":"CDS","start":8717,"end":9501,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Gly","type":"tRNA","start":9502,"end":9571,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"ND3","type":"CDS","start":9572,"end":9917,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Arg","type":"tRNA","start":9918,"end":9987,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"ND4L","type":"CDS","start":9988,"end":10284,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"ND4","type":"CDS","start":10278,"end":11652,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-His","type":"tRNA","start":11653,"end":11721,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Ser(AGY)","type":"tRNA","start":11722,"end":11787,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Leu(CUN)","type":"tRNA","start":11790,"end":11861,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"ND5","type":"CDS","start":11862,"end":13703,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"ND6","type":"CDS","start":13699,"end":14202,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Glu","type":"tRNA","start":14203,"end":14271,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"CYTB","type":"CDS","start":14275,"end":15415,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Thr","type":"tRNA","start":15416,"end":15486,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"tRNA-Pro","type":"tRNA","start":15486,"end":15554,"strand":-1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}},{"name":"D_Loop","type":"D-loop","start":15555,"end":16627,"strand":1,"provenance":{"addedInBuild":1,"addedAt":"2015-07-01T00:00:00.000Z","lastModifiedBuild":null,"lastModifiedAt":null,"recordStatus":"original","sourceVersion":"NC_004418.1"}}]}