family · mtDNA statistics

Myrmecophagidae

3 species in 2 genera. Every region of their mitochondrial genomes, side by side.

3
species
39.0%
mean GC, whole genome
SD 0.1, range 38.9–39.1%
16,395
median genome length, bp
Range 16,385–16,498 bp
2
genera

Regions

GC content of each region across Myrmecophagidae, % of A + C + G + T

GC % of every region
Region
Whole genome339.04%0.090.00238.94%Tamandua mexicana39.08%39.10%Myrmecophaga tridactyla––
Protein-coding339.14%0.170.00438.97%Tamandua mexicana39.16%39.30%Myrmecophaga tridactyla––
All rRNA340.15%0.620.01539.45%Myrmecophaga tridactyla40.44%40.58%Tamandua tetradactyla––
All tRNA337.31%0.460.01236.79%Myrmecophaga tridactyla37.50%37.65%Tamandua tetradactyla––
12S rRNA342.33%1.660.03940.42%Myrmecophaga tridactyla43.16%43.42%Tamandua tetradactyla––
16S rRNA338.82%0.040.00138.78%Tamandua mexicana38.84%38.86%Myrmecophaga tridactyla––
D-loop338.21%1.210.03237.44%Tamandua tetradactyla37.58%39.61%Myrmecophaga tridactyla––
ND1340.19%0.440.01139.92%Tamandua tetradactyla39.96%40.69%Myrmecophaga tridactyla––
ND2335.74%1.210.03434.64%Tamandua mexicana35.54%37.04%Myrmecophaga tridactyla––
COX1340.81%0.780.01940.21%Tamandua tetradactyla40.53%41.70%Myrmecophaga tridactyla––
COX2341.13%1.460.03639.47%Myrmecophaga tridactyla41.67%42.25%Tamandua tetradactyla––
ATP8333.01%1.980.06030.88%Myrmecophaga tridactyla33.33%34.80%Tamandua tetradactyla––
ATP6339.60%0.220.00639.35%Tamandua mexicana39.65%39.79%Tamandua tetradactyla––
COX3342.56%0.650.01541.84%Tamandua mexicana42.73%43.11%Myrmecophaga tridactyla––
ND3338.44%1.000.02637.28%Tamandua tetradactyla39.02%39.02%Tamandua mexicana––
ND4L335.47%0.780.02235.02%Tamandua tetradactyla35.02%36.36%Tamandua mexicana––
ND4337.98%0.040.00137.95%Tamandua mexicana37.95%38.03%Tamandua tetradactyla––
ND5338.11%0.270.00737.84%Myrmecophaga tridactyla38.11%38.39%Tamandua tetradactyla––
ND6337.06%0.220.00636.93%Tamandua mexicana36.93%37.31%Tamandua tetradactyla––
CYTB341.27%0.160.00441.09%Tamandua mexicana41.32%41.40%Myrmecophaga tridactyla––

Genera of Myrmecophagidae

GC content of the whole genome, % of A + C + G + T

Genera of Myrmecophagidae
Tamandua239.01%0.100.00338.94%Tamandua mexicana39.01%39.08%Tamandua tetradactyla––
Myrmecophaga139.10%––39.10%Myrmecophaga tridactyla39.10%39.10%Myrmecophaga tridactyla––

Codon usage

Share of each codon in all 13 protein-coding genes, across Myrmecophagidae

Loading codon usage…

Every species, region by region

Each region's page lists the value of every species, with the same statistics by class, order or family and a CSV download.

The charts

  • Each chart draws the rows of the table under it, in the table's order: sort a column to reorder the chart.Chart sets its axis.
  • Distribution: the range (line), mean ± SD (bar), median (tick) and mean (dot). Lengths of the regions are on a log scale.
  • Variation: the coefficient of variation, or the SD for the skews, which vary around zero.
  • Lifespan r: r with its 95% confidence interval (Fisher z). Lifespan map: r of every parameter in every region at once, bold where the Benjamini–Hochberg q-value over the map is below 0.05.

What the numbers are

  • Species: species with the region annotated. SD is the sample standard deviation, CV = SD / mean.
  • Base percentages are over A + C + G + T, so GC % + AT % = 100. Skews are on the L strand as deposited in RefSeq: GC skew = (G − C) / (G + C), AT skew = (A − T) / (A + T).
  • Min and Max name the species with the extreme value.

Lifespan columns

r is the Pearson correlation of the parameter with log10 maximum lifespan within the group (5 or more species), and p its two-tailed p-value, as on the original MitoAge. They are not corrected for multiple testing or for shared ancestry: the plot shows Benjamini–Hochberg q-values and phylogenetic contrasts.

The original site labelled the base columns with their complements, so its skews have the opposite sign. Seemethods.