MitoAge

Tamandua tetradactyla

Southern tamandua

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Maximum lifespan
19 yr
AnAge record
mtDNA size
16,395 bp
RefSeq NC_004032.1
GC content
39.08%
Whole genome
Non-coding
1,037 bp
D-loop 975 bp

Where Southern tamandua sits among 2,335 species

Whole-genome GC content against maximum lifespan. Southern tamandua has the 982nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Southern tamandua
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,395 bp
GC skew (G − C) / (G + C)
−0.312
AT skew (A − T) / (A + T)
+0.134

Life history

Maximum lifespan
19 years
Adult weight
4.5 kg
Basal metabolic rate
5.015 W
Body temperature
33.5 °C
Female sexual maturity
365 days
Gestation or incubation
160 days
Litter or clutch size
1
Litters per year
1.4

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02661)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,395 bp
Protein-coding11,338 bp
12S rRNA958 bp
16S rRNA1,568 bp
All tRNA1,498 bp
D-loop975 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp33.5%26.5%13.3%26.6%39.92%−0.335+0.117
ND2NADH dehydrogenase subunit 21,044 bp36.8%27.7%9.3%26.2%35.54%−0.477+0.141
COX1Cytochrome c oxidase subunit I1,542 bp30.5%29.3%16.0%24.3%40.21%−0.206+0.020
COX2Cytochrome c oxidase subunit II684 bp33.9%23.8%14.6%27.6%42.25%−0.308+0.175
ATP8ATP synthase F0 subunit 8204 bp42.2%23.0%6.4%28.4%34.80%−0.634+0.293
ATP6ATP synthase F0 subunit 6681 bp33.9%26.3%11.3%28.5%39.79%−0.432+0.127
COX3Cytochrome c oxidase subunit III784 bp29.3%27.9%15.3%27.4%42.73%−0.284+0.025
ND3NADH dehydrogenase subunit 3346 bp34.1%28.6%11.8%25.4%37.28%−0.364+0.088
ND4LNADH dehydrogenase subunit 4L297 bp33.7%31.3%12.1%22.9%35.02%−0.308+0.036
ND4NADH dehydrogenase subunit 41,378 bp35.0%27.0%10.2%27.9%38.03%−0.466+0.129
ND5NADH dehydrogenase subunit 51,821 bp35.0%26.6%11.0%27.4%38.39%−0.428+0.137
ND6NADH dehydrogenase subunit 6528 bp44.1%18.6%6.3%31.1%37.31%−0.665+0.408
CYTBCytochrome b1,140 bp32.5%26.2%12.5%28.9%41.32%−0.397+0.106
12S rRNA12S ribosomal RNA958 bp35.7%20.9%19.6%23.8%43.42%−0.096+0.262
16S rRNA16S ribosomal RNA1,568 bp36.9%24.2%18.2%20.7%38.84%−0.064+0.208
D-loopControl region (D-loop)975 bp32.6%29.9%13.8%23.6%37.44%−0.260+0.043

Codon usage

Counts per codon, darker is more frequent

3,801 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.9%
UUU89
UUC137
Leu L16.1%
UUA99
UUG23
CUU51
CUC67
CUA341
CUG32
Ile I8.4%
AUU144
AUC174
Met M6.9%
AUA223
AUG40
Val V5.0%
GUU39
GUC24
GUA111
GUG17
Ser S7.2%
UCU31
UCC45
UCA137
UCG5
AGU19
AGC36
Pro P5.2%
CCU33
CCC26
CCA133
CCG4
Thr T8.2%
ACU58
ACC73
ACA172
ACG9
Ala A6.7%
GCU47
GCC80
GCA123
GCG4
Tyr Y3.5%
UAU57
UAC75
His H2.7%
CAU34
CAC67
Gln Q2.6%
CAA90
CAG8
Asn N3.8%
AAU49
AAC97
Lys K2.4%
AAA85
AAG7
Asp D1.9%
GAU29
GAC42
Glu E2.4%
GAA77
GAG16
Cys C0.7%
UGU10
UGC16
Trp W2.7%
UGA92
UGG11
Arg R1.8%
CGU13
CGC16
CGA37
CGG1
Gly G5.7%
GGU30
GGC52
GGA105
GGG29
Stop 0.3%
UAA6
UAG3
AGA0
AGG1

Genome map

38 annotated features in NC_004032.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,027958 bp+43.4%
tRNA-ValTransfer RNA1,0281,09467 bp+–
16S rRNARibosomal RNA1,0952,6621,568 bp+38.8%
tRNA-Leu (UUR)Transfer RNA2,6632,73775 bp+–
ND1Protein-coding gene2,7393,695957 bp+39.9%
tRNA-IleTransfer RNA3,6953,76369 bp+–
tRNA-GlnTransfer RNA3,7613,83474 bp−–
tRNA-MetTransfer RNA3,8373,90569 bp+–
ND2Protein-coding gene3,9074,9501,044 bp+35.5%
tRNA-TrpTransfer RNA4,9495,01870 bp+–
tRNA-AlaTransfer RNA5,0215,08969 bp−–
tRNA-AsnTransfer RNA5,0915,16373 bp−–
tRNA-CysTransfer RNA5,1895,25567 bp−–
tRNA-TyrTransfer RNA5,2585,32669 bp−–
COX1Protein-coding gene5,3286,8691,542 bp+40.2%
tRNA-Ser (UCN)Transfer RNA6,8716,93969 bp−–
tRNA-AspTransfer RNA6,9457,01369 bp+–
COX2Protein-coding gene7,0147,697684 bp+42.3%
tRNA-LysTransfer RNA7,7007,76768 bp+–
ATP8Protein-coding gene7,7697,972204 bp+34.8%
ATP6Protein-coding gene7,9308,610681 bp+39.8%
COX3Protein-coding gene8,6109,393784 bp+42.7%
tRNA-GlyTransfer RNA9,3949,46269 bp+–
ND3Protein-coding gene9,4639,808346 bp+37.3%
tRNA-ArgTransfer RNA9,8109,86455 bp+–
ND4LProtein-coding gene9,87910,175297 bp+35.0%
ND4Protein-coding gene10,16911,5461,378 bp+38.0%
tRNA-HisTransfer RNA11,54711,61468 bp+–
tRNA-Ser (AGY)Transfer RNA11,61511,67460 bp+–
tRNA-Leu (CUN)Transfer RNA11,67511,74470 bp+–
ND5Protein-coding gene11,74513,5651,821 bp+38.4%
ND6Protein-coding gene13,54914,076528 bp−37.3%
tRNA-GluTransfer RNA14,07714,14569 bp−–
CYTBProtein-coding gene14,14815,2871,140 bp+41.3%
tRNA-ThrTransfer RNA15,28715,35266 bp+–
tRNA-ProTransfer RNA15,35415,42067 bp−–
D-loopControl region15,42116,395975 bp–37.4%

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