Acipenser fulvescens
Lake sturgeon
GC content
45.82%
Whole genome
Non-coding
909 bp
D-loop 827 bp
Where Lake sturgeon sits among 2,335 species
Whole-genome GC content against maximum lifespan. Lake sturgeon has the 10th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,542 bp
- GC skew (G − C) / (G + C)
- −0.280
- AT skew (A − T) / (A + T)
- +0.109
Life history
- Maximum lifespan
- 152 years
- Adult weight
- 70 kg
- Female sexual maturity
- 26 years
- Male sexual maturity
- 8 years
- Gestation or incubation
- 6 days
- Litter or clutch size
- 350,000
Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01866)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,542 bp
Protein-coding11,412 bp
12S rRNA961 bp
16S rRNA1,700 bp
All tRNA1,560 bp
D-loop827 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 45.54% | −0.387 | +0.058 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 45.26% | −0.463 | +0.199 | |||||
| COX1Cytochrome c oxidase subunit I | 1,554 bp | 47.88% | −0.164 | −0.081 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.28% | −0.255 | +0.122 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 42.26% | −0.437 | +0.113 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 48.25% | −0.418 | +0.017 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.28% | −0.266 | +0.015 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 47.56% | −0.313 | −0.060 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.51% | −0.453 | +0.007 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.20% | −0.342 | +0.077 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,842 bp | 44.73% | −0.425 | +0.116 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 46.55% | −0.506 | +0.563 | |||||
| CYTBCytochrome b | 1,141 bp | 47.33% | −0.333 | +0.005 | |||||
| 12S rRNA12S ribosomal RNA | 961 bp | 49.01% | −0.113 | +0.253 | |||||
| 16S rRNA16S ribosomal RNA | 1,700 bp | 44.53% | −0.102 | +0.290 | |||||
| D-loopControl region (D-loop) | 827 bp | 38.21% | −0.203 | +0.022 |
Codon usage
Counts per codon, darker is more frequent3,809 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.8%
UUU102
UUC119
Leu L16.5%
UUA80
UUG24
CUU77
CUC130
CUA253
CUG66
Ile I7.5%
AUU144
AUC141
Met M4.5%
AUA115
AUG57
Val V5.9%
GUU44
GUC47
GUA88
GUG45
Ser S6.0%
UCU29
UCC82
UCA58
UCG11
AGU10
AGC40
Pro P5.6%
CCU27
CCC94
CCA79
CCG15
Thr T8.3%
ACU37
ACC142
ACA123
ACG15
Ala A8.7%
GCU40
GCC170
GCA104
GCG19
Tyr Y3.1%
UAU45
UAC73
His H2.7%
CAU23
CAC79
Gln Q2.7%
CAA95
CAG9
Asn N3.4%
AAU30
AAC101
Lys K2.1%
AAA73
AAG6
Asp D2.0%
GAU19
GAC56
Glu E2.7%
GAA83
GAG18
Cys C0.7%
UGU8
UGC20
Trp W3.1%
UGA103
UGG16
Arg R2.0%
CGU5
CGC15
CGA48
CGG7
Gly G6.4%
GGU28
GGC81
GGA84
GGG50
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_030325.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,029 | 961 bp | + | 49.0% |
| tRNA-Val | Transfer RNA | 1,030 | 1,100 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,101 | 2,800 | 1,700 bp | + | 44.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,801 | 2,875 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,876 | 3,850 | 975 bp | + | 45.5% |
| tRNA-Ile | Transfer RNA | 3,860 | 3,930 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,930 | 4,000 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,000 | 4,069 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,070 | 5,114 | 1,045 bp | + | 45.3% |
| tRNA-Trp | Transfer RNA | 5,115 | 5,187 | 73 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,190 | 5,258 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,260 | 5,332 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,367 | 5,433 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,434 | 5,504 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,506 | 7,059 | 1,554 bp | + | 47.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,068 | 7,138 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,147 | 7,218 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,233 | 7,923 | 691 bp | + | 44.3% |
| tRNA-Lys | Transfer RNA | 7,924 | 7,997 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,999 | 8,166 | 168 bp | + | 42.3% |
| ATP6 | Protein-coding gene | 8,157 | 8,840 | 684 bp | + | 48.3% |
| COX3 | Protein-coding gene | 8,840 | 9,624 | 785 bp | + | 48.3% |
| tRNA-Gly | Transfer RNA | 9,625 | 9,697 | 73 bp | + | – |
| ND3 | Protein-coding gene | 9,698 | 10,046 | 349 bp | + | 47.6% |
| tRNA-Arg | Transfer RNA | 10,047 | 10,116 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,117 | 10,413 | 297 bp | + | 50.5% |
| ND4 | Protein-coding gene | 10,407 | 11,787 | 1,381 bp | + | 46.2% |
| tRNA-His | Transfer RNA | 11,788 | 11,856 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,857 | 11,924 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,925 | 11,997 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,998 | 13,839 | 1,842 bp | + | 44.7% |
| ND6 | Protein-coding gene | 13,836 | 14,357 | 522 bp | − | 46.6% |
| tRNA-Glu | Transfer RNA | 14,358 | 14,427 | 70 bp | − | – |
| CYTB | Protein-coding gene | 14,430 | 15,570 | 1,141 bp | + | 47.3% |
| tRNA-Thr | Transfer RNA | 15,571 | 15,643 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,646 | 15,715 | 70 bp | − | – |
| D-loop | Control region | 15,716 | 16,542 | 827 bp | – | 38.2% |