MitoAge

Acipenser oxyrinchus

Atlantic sturgeon

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Maximum lifespan
60 yr
AnAge record
mtDNA size
16,565 bp
RefSeq NC_028290.1
GC content
45.63%
Whole genome
Non-coding
933 bp
D-loop 858 bp

Where Atlantic sturgeon sits among 2,335 species

Whole-genome GC content against maximum lifespan. Atlantic sturgeon has the 93rd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Atlantic sturgeon
  • This species
  • Other ray-finned fishes
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,565 bp
GC skew (G − C) / (G + C)
−0.281
AT skew (A − T) / (A + T)
+0.106

Life history

Maximum lifespan
60 years
Adult weight
202.4 kg

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 01868)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,565 bp
Protein-coding11,417 bp
12S rRNA961 bp
16S rRNA1,699 bp
All tRNA1,560 bp
D-loop858 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1975 bp27.6%25.6%15.1%31.7%46.77%−0.355+0.037
ND2NADH dehydrogenase subunit 21,047 bp33.0%22.2%11.8%33.0%44.80%−0.471+0.197
COX1Cytochrome c oxidase subunit I1,554 bp24.3%27.3%19.5%28.9%48.39%−0.194−0.057
COX2Cytochrome c oxidase subunit II691 bp31.1%25.0%16.9%26.9%43.85%−0.228+0.108
ATP8ATP synthase F0 subunit 8168 bp33.9%25.0%11.3%29.8%41.07%−0.449+0.152
ATP6ATP synthase F0 subunit 6684 bp26.6%27.5%13.6%32.3%45.91%−0.408−0.016
COX3Cytochrome c oxidase subunit III786 bp26.6%24.9%17.0%31.4%48.47%−0.297+0.032
ND3NADH dehydrogenase subunit 3351 bp23.6%27.4%17.1%31.9%49.00%−0.302−0.073
ND4LNADH dehydrogenase subunit 4L297 bp23.9%25.3%15.5%35.4%50.84%−0.391−0.027
ND4NADH dehydrogenase subunit 41,381 bp28.8%25.1%15.3%30.8%46.05%−0.336+0.068
ND5NADH dehydrogenase subunit 51,842 bp30.1%24.8%13.4%31.8%45.17%−0.409+0.097
ND6NADH dehydrogenase subunit 6522 bp41.6%11.9%11.5%35.1%46.55%−0.506+0.556
CYTBCytochrome b1,141 bp26.1%26.6%16.1%31.2%47.33%−0.319−0.008
12S rRNA12S ribosomal RNA961 bp32.3%18.8%21.5%27.4%48.91%−0.119+0.263
16S rRNA16S ribosomal RNA1,699 bp36.2%19.9%19.8%24.1%43.91%−0.099+0.291
D-loopControl region (D-loop)858 bp33.9%31.5%12.4%22.3%34.62%−0.286+0.037

Codon usage

Counts per codon, darker is more frequent

3,812 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.9%
UUU108
UUC116
Leu L16.4%
UUA90
UUG28
CUU76
CUC131
CUA234
CUG67
Ile I7.4%
AUU140
AUC143
Met M4.6%
AUA108
AUG67
Val V5.8%
GUU34
GUC64
GUA78
GUG47
Ser S6.2%
UCU36
UCC77
UCA68
UCG4
AGU7
AGC43
Pro P5.6%
CCU32
CCC89
CCA79
CCG13
Thr T8.4%
ACU36
ACC143
ACA125
ACG16
Ala A8.6%
GCU39
GCC168
GCA107
GCG15
Tyr Y3.1%
UAU46
UAC72
His H2.7%
CAU17
CAC85
Gln Q2.7%
CAA91
CAG13
Asn N3.4%
AAU30
AAC99
Lys K2.1%
AAA72
AAG7
Asp D1.9%
GAU22
GAC52
Glu E2.6%
GAA75
GAG26
Cys C0.8%
UGU10
UGC20
Trp W3.1%
UGA105
UGG15
Arg R1.9%
CGU6
CGC11
CGA50
CGG7
Gly G6.4%
GGU21
GGC90
GGA81
GGG51
Stop 0.3%
UAA6
UAG4
AGA0
AGG0

Genome map

38 annotated features in NC_028290.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (45.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,029961 bp+48.9%
tRNA-ValTransfer RNA1,0301,10071 bp+–
16S rRNARibosomal RNA1,1012,7991,699 bp+43.9%
tRNA-Leu (UUR)Transfer RNA2,8002,87475 bp+–
ND1Protein-coding gene2,8753,849975 bp+46.8%
tRNA-IleTransfer RNA3,8593,92971 bp+–
tRNA-GlnTransfer RNA3,9293,99971 bp−–
tRNA-MetTransfer RNA3,9994,06870 bp+–
ND2Protein-coding gene4,0695,1151,047 bp+44.8%
tRNA-TrpTransfer RNA5,1145,18673 bp+–
tRNA-AlaTransfer RNA5,1885,25669 bp−–
tRNA-AsnTransfer RNA5,2585,33073 bp−–
tRNA-CysTransfer RNA5,3635,42967 bp−–
tRNA-TyrTransfer RNA5,4305,50071 bp−–
COX1Protein-coding gene5,5027,0551,554 bp+48.4%
tRNA-Ser (UCN)Transfer RNA7,0597,12971 bp−–
tRNA-AspTransfer RNA7,1387,20972 bp+–
COX2Protein-coding gene7,2247,914691 bp+43.9%
tRNA-LysTransfer RNA7,9157,98874 bp+–
ATP8Protein-coding gene7,9908,157168 bp+41.1%
ATP6Protein-coding gene8,1488,831684 bp+45.9%
COX3Protein-coding gene8,8319,616786 bp+48.5%
tRNA-GlyTransfer RNA9,6169,68873 bp+–
ND3Protein-coding gene9,68910,039351 bp+49.0%
tRNA-ArgTransfer RNA10,03810,10770 bp+–
ND4LProtein-coding gene10,10810,404297 bp+50.8%
ND4Protein-coding gene10,39811,7781,381 bp+46.1%
tRNA-HisTransfer RNA11,77911,84769 bp+–
tRNA-Ser (AGY)Transfer RNA11,84811,91568 bp+–
tRNA-Leu (CUN)Transfer RNA11,91611,98873 bp+–
ND5Protein-coding gene11,98913,8301,842 bp+45.2%
ND6Protein-coding gene13,82714,348522 bp−46.6%
tRNA-GluTransfer RNA14,34914,41870 bp−–
CYTBProtein-coding gene14,42115,5611,141 bp+47.3%
tRNA-ThrTransfer RNA15,56215,63473 bp+–
tRNA-ProTransfer RNA15,63815,70770 bp−–
D-loopControl region15,70816,565858 bp–34.6%

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