Acipenser stellatus

Star sturgeon

Maximum lifespan

27 yr

AnAge record

mtDNA size

16,537 bp

RefSeq NC_005795.1

GC content

46.01%

Whole genome

Non-coding

919 bp

D-loop 822 bp

Where Star sturgeon sits among 2,335 species

Whole-genome GC content against maximum lifespan. Star sturgeon has the 544th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,537 bp

GC skew (G − C) / (G + C): −0.282
AT skew (A − T) / (A + T): +0.108

Life history

Maximum lifespan: 27 years
Adult weight: 44 kg
Female sexual maturity: 9 years
Male sexual maturity: 6 years

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01871)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,537 bp

Protein-coding11,415 bp

12S rRNA961 bp

16S rRNA1,702 bp

All tRNA1,545 bp

D-loop822 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Acipenser stellatus genes

ND1NADH dehydrogenase subunit 1	975 bp	28.6%	25.2%	14.4%	31.8%	46.15%	−0.378	+0.063
ND2NADH dehydrogenase subunit 2	1,045 bp	31.8%	22.6%	13.2%	32.4%	45.65%	−0.421	+0.169
COX1Cytochrome c oxidase subunit I	1,554 bp	24.4%	27.9%	19.4%	28.3%	47.68%	−0.188	−0.068
COX2Cytochrome c oxidase subunit II	691 bp	30.4%	24.5%	17.5%	27.6%	45.15%	−0.224	+0.108
ATP8ATP synthase F0 subunit 8	168 bp	32.1%	25.0%	12.5%	30.4%	42.86%	−0.417	+0.125
ATP6ATP synthase F0 subunit 6	684 bp	26.5%	26.0%	13.7%	33.8%	47.52%	−0.422	+0.008
COX3Cytochrome c oxidase subunit III	786 bp	26.5%	24.9%	17.4%	31.2%	48.60%	−0.283	+0.030
ND3NADH dehydrogenase subunit 3	349 bp	24.9%	28.1%	16.0%	30.9%	46.99%	−0.317	−0.059
ND4LNADH dehydrogenase subunit 4L	297 bp	23.6%	24.2%	15.8%	36.4%	52.19%	−0.394	−0.014
ND4NADH dehydrogenase subunit 4	1,381 bp	28.3%	24.4%	15.6%	31.6%	47.29%	−0.338	+0.074
ND5NADH dehydrogenase subunit 5	1,837 bp	30.6%	23.7%	13.0%	32.5%	45.56%	−0.428	+0.127
ND6NADH dehydrogenase subunit 6	525 bp	40.8%	11.6%	12.4%	35.2%	47.62%	−0.480	+0.556
CYTBCytochrome b	1,141 bp	26.9%	26.0%	15.4%	31.6%	47.06%	−0.345	+0.017
12S rRNA12S ribosomal RNA	961 bp	31.8%	18.7%	21.9%	27.6%	49.43%	−0.116	+0.259
16S rRNA16S ribosomal RNA	1,702 bp	35.1%	20.0%	19.5%	25.1%	44.73%	−0.125	+0.273
D-loopControl region (D-loop)	822 bp	33.0%	31.0%	14.4%	21.5%	35.93%	−0.200	+0.030

Codon usage

Counts per codon, darker is more frequent

Gene

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%

UUU96

UUC124

Leu L16.6%

UUA82

UUG23

CUU82

CUC127

CUA240

CUG78

Ile I7.4%

AUU137

AUC146

Met M4.5%

AUA112

AUG59

Val V5.9%

GUU35

GUC60

GUA83

GUG45

Ser S6.1%

UCU29

UCC78

UCA65

UCG9

AGU11

AGC42

Pro P5.6%

CCU30

CCC90

CCA85

CCG10

Thr T8.2%

ACU30

ACC140

ACA123

ACG18

Ala A9.0%

GCU40

GCC178

GCA106

GCG17

Tyr Y3.1%

UAU43

UAC74

His H2.7%

CAU20

CAC82

Gln Q2.7%

CAA89

CAG14

Asn N3.4%

AAU30

AAC98

Lys K2.1%

AAA72

AAG7

Asp D2.0%

GAU18

GAC57

Glu E2.6%

GAA81

GAG18

Cys C0.8%

UGU10

UGC19

Trp W3.1%

UGA100

UGG19

Arg R2.0%

CGU4

CGC14

CGA49

CGG8

Gly G6.4%

GGU27

GGC83

GGA92

GGG42

Stop 0.2%

UAA5

UAG2

AGA0

AGG0

Genome map

38 annotated features in NC_005795.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (46.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Acipenser stellatus (NC_005795.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	67	67 bp	+	–
12S rRNA	Ribosomal RNA	68	1,028	961 bp	+	49.4%
tRNA-Val	Transfer RNA	1,029	1,099	71 bp	+	–
16S rRNA	Ribosomal RNA	1,100	2,801	1,702 bp	+	44.7%
tRNA-Leu (UUR)	Transfer RNA	2,802	2,876	75 bp	+	–
ND1	Protein-coding gene	2,877	3,851	975 bp	+	46.2%
tRNA-Ile	Transfer RNA	3,861	3,931	71 bp	+	–
tRNA-Gln	Transfer RNA	3,931	4,001	71 bp	−	–
tRNA-Met	Transfer RNA	4,001	4,070	70 bp	+	–
ND2	Protein-coding gene	4,071	5,115	1,045 bp	+	45.7%
tRNA-Trp	Transfer RNA	5,116	5,188	73 bp	+	–
tRNA-Ala	Transfer RNA	5,189	5,255	67 bp	−	–
tRNA-Asn	Transfer RNA	5,257	5,329	73 bp	−	–
tRNA-Cys	Transfer RNA	5,367	5,433	67 bp	−	–
tRNA-Tyr	Transfer RNA	5,434	5,504	71 bp	−	–
COX1	Protein-coding gene	5,506	7,059	1,554 bp	+	47.7%
tRNA-Ser (UCN)	Transfer RNA	7,068	7,138	71 bp	−	–
tRNA-Asp	Transfer RNA	7,146	7,217	72 bp	+	–
COX2	Protein-coding gene	7,232	7,922	691 bp	+	45.2%
tRNA-Lys	Transfer RNA	7,924	7,997	74 bp	+	–
ATP8	Protein-coding gene	7,998	8,165	168 bp	+	42.9%
ATP6	Protein-coding gene	8,156	8,839	684 bp	+	47.5%
COX3	Protein-coding gene	8,839	9,624	786 bp	+	48.6%
tRNA-Gly	Transfer RNA	9,624	9,696	73 bp	+	–
ND3	Protein-coding gene	9,697	10,045	349 bp	+	47.0%
tRNA-Arg	Transfer RNA	10,046	10,115	70 bp	+	–
ND4L	Protein-coding gene	10,116	10,412	297 bp	+	52.2%
ND4	Protein-coding gene	10,406	11,786	1,381 bp	+	47.3%
tRNA-His	Transfer RNA	11,787	11,855	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,856	11,911	56 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,924	11,996	73 bp	+	–
ND5	Protein-coding gene	11,997	13,833	1,837 bp	+	45.6%
ND6	Protein-coding gene	13,835	14,359	525 bp	−	47.6%
tRNA-Glu	Transfer RNA	14,357	14,426	70 bp	−	–
CYTB	Protein-coding gene	14,429	15,569	1,141 bp	+	47.1%
tRNA-Thr	Transfer RNA	15,569	15,641	73 bp	+	–
tRNA-Pro	Transfer RNA	15,645	15,714	70 bp	−	–
D-loop	Control region	15,715	16,536	822 bp	–	35.9%