Acipenser sturio
European sturgeon
GC content
45.46%
Whole genome
Non-coding
925 bp
D-loop 848 bp
Where European sturgeon sits among 2,335 species
Whole-genome GC content against maximum lifespan. European sturgeon has the 29th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,555 bp
- GC skew (G − C) / (G + C)
- −0.281
- AT skew (A − T) / (A + T)
- +0.104
Life history
- Maximum lifespan
- 100 years
- Adult weight
- 220 kg
- Female sexual maturity
- 12.6 years
- Male sexual maturity
- 9.5 years
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 01872)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Updated in build 2
- In the database since
- build 1 (2015-07-01)
- Last changed
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,555 bp
Protein-coding11,412 bp
12S rRNA959 bp
16S rRNA1,699 bp
All tRNA1,560 bp
D-loop848 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 45.85% | −0.378 | +0.045 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 43.92% | −0.460 | +0.177 | |||||
| COX1Cytochrome c oxidase subunit I | 1,554 bp | 47.04% | −0.190 | −0.064 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.43% | −0.205 | +0.094 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 41.07% | −0.391 | +0.111 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 46.20% | −0.418 | −0.005 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.03% | −0.289 | +0.020 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 48.42% | −0.290 | −0.089 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.17% | −0.423 | 0.000 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.49% | −0.336 | +0.069 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,842 bp | 45.28% | −0.415 | +0.097 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 46.94% | −0.478 | +0.538 | |||||
| CYTBCytochrome b | 1,141 bp | 46.54% | −0.333 | +0.010 | |||||
| 12S rRNA12S ribosomal RNA | 959 bp | 49.43% | −0.122 | +0.270 | |||||
| 16S rRNA16S ribosomal RNA | 1,699 bp | 44.03% | −0.104 | +0.295 | |||||
| D-loopControl region (D-loop) | 848 bp | 35.38% | −0.247 | +0.022 |
Codon usage
Counts per codon, darker is more frequent3,809 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU98
UUC126
Leu L16.5%
UUA94
UUG27
CUU77
CUC133
CUA233
CUG66
Ile I7.5%
AUU141
AUC143
Met M4.6%
AUA111
AUG64
Val V5.8%
GUU38
GUC53
GUA85
GUG46
Ser S6.1%
UCU34
UCC76
UCA67
UCG4
AGU10
AGC40
Pro P5.6%
CCU31
CCC93
CCA77
CCG14
Thr T8.3%
ACU36
ACC141
ACA124
ACG17
Ala A8.6%
GCU45
GCC164
GCA107
GCG13
Tyr Y3.1%
UAU49
UAC68
His H2.7%
CAU22
CAC81
Gln Q2.7%
CAA90
CAG14
Asn N3.4%
AAU32
AAC98
Lys K2.1%
AAA72
AAG7
Asp D1.9%
GAU25
GAC49
Glu E2.7%
GAA82
GAG19
Cys C0.8%
UGU10
UGC20
Trp W3.2%
UGA105
UGG15
Arg R1.9%
CGU7
CGC11
CGA50
CGG6
Gly G6.4%
GGU24
GGC86
GGA84
GGG48
Stop 0.2%
UAA5
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_027417.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,027 | 959 bp | + | 49.4% |
| tRNA-Val | Transfer RNA | 1,028 | 1,098 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,099 | 2,797 | 1,699 bp | + | 44.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,798 | 2,872 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,873 | 3,847 | 975 bp | + | 45.9% |
| tRNA-Ile | Transfer RNA | 3,857 | 3,927 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,927 | 3,997 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,997 | 4,066 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,067 | 5,111 | 1,045 bp | + | 43.9% |
| tRNA-Trp | Transfer RNA | 5,112 | 5,184 | 73 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,186 | 5,254 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,256 | 5,328 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,362 | 5,428 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,429 | 5,499 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,501 | 7,054 | 1,554 bp | + | 47.0% |
| tRNA-Ser (UCN) | Transfer RNA | 7,058 | 7,128 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,137 | 7,208 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,223 | 7,913 | 691 bp | + | 44.4% |
| tRNA-Lys | Transfer RNA | 7,914 | 7,987 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,989 | 8,156 | 168 bp | + | 41.1% |
| ATP6 | Protein-coding gene | 8,147 | 8,830 | 684 bp | + | 46.2% |
| COX3 | Protein-coding gene | 8,830 | 9,614 | 785 bp | + | 48.0% |
| tRNA-Gly | Transfer RNA | 9,615 | 9,687 | 73 bp | + | – |
| ND3 | Protein-coding gene | 9,688 | 10,036 | 349 bp | + | 48.4% |
| tRNA-Arg | Transfer RNA | 10,037 | 10,106 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,107 | 10,403 | 297 bp | + | 50.2% |
| ND4 | Protein-coding gene | 10,397 | 11,777 | 1,381 bp | + | 46.5% |
| tRNA-His | Transfer RNA | 11,778 | 11,846 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,847 | 11,914 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,915 | 11,987 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,988 | 13,829 | 1,842 bp | + | 45.3% |
| ND6 | Protein-coding gene | 13,826 | 14,347 | 522 bp | − | 46.9% |
| tRNA-Glu | Transfer RNA | 14,348 | 14,417 | 70 bp | − | – |
| CYTB | Protein-coding gene | 14,420 | 15,560 | 1,141 bp | + | 46.5% |
| tRNA-Thr | Transfer RNA | 15,561 | 15,633 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,638 | 15,707 | 70 bp | − | – |
| D-loop | Control region | 15,708 | 16,555 | 848 bp | – | 35.4% |