Albula vulpes
Bonefish
GC content
45.16%
Whole genome
Non-coding
743 bp
Including the D-loop
Where Bonefish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Bonefish has the 928th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,357 bp
- GC skew (G − C) / (G + C)
- +0.043
- AT skew (A − T) / (A + T)
- −0.162
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,357 bp
Protein-coding11,393 bp
12S rRNA971 bp
16S rRNA1,695 bp
All tRNA1,555 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 969 bp | 47.27% | −0.022 | −0.319 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 49.28% | +0.029 | −0.226 | |||||
| COX1Cytochrome c oxidase subunit I | 1,554 bp | 44.92% | +0.034 | −0.327 | |||||
| COX2Cytochrome c oxidase subunit II | 687 bp | 44.40% | +0.082 | −0.188 | |||||
| ATP8ATP synthase F0 subunit 8 | 171 bp | 38.01% | −0.169 | −0.151 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 45.32% | −0.032 | −0.326 | |||||
| COX3Cytochrome c oxidase subunit III | 788 bp | 46.70% | +0.060 | −0.314 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 42.69% | −0.007 | −0.420 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.15% | +0.007 | −0.403 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.78% | +0.096 | −0.279 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,842 bp | 43.81% | +0.021 | −0.227 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 48.85% | −0.035 | +0.199 | |||||
| CYTBCytochrome b | 1,126 bp | 45.38% | −0.029 | −0.288 | |||||
| 12S rRNA12S ribosomal RNA | 971 bp | 47.99% | +0.056 | +0.069 | |||||
| 16S rRNA16S ribosomal RNA | 1,695 bp | 42.71% | +0.113 | +0.129 |
Codon usage
Counts per codon, darker is more frequent3,803 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU135
UUC96
Leu L16.2%
UUA121
UUG139
CUU151
CUC56
CUA68
CUG80
Ile I6.1%
AUU155
AUC76
Met M4.2%
AUA27
AUG133
Val V8.0%
GUU110
GUC51
GUA67
GUG78
Ser S6.5%
UCU94
UCC34
UCA30
UCG36
AGU40
AGC13
Pro P5.5%
CCU109
CCC38
CCA34
CCG29
Thr T7.0%
ACU122
ACC55
ACA40
ACG49
Ala A9.1%
GCU144
GCC91
GCA65
GCG47
Tyr Y3.1%
UAU73
UAC46
His H2.8%
CAU78
CAC28
Gln Q2.4%
CAA14
CAG78
Asn N3.1%
AAU78
AAC39
Lys K2.1%
AAA23
AAG55
Asp D2.1%
GAU50
GAC29
Glu E2.8%
GAA25
GAG81
Cys C0.8%
UGU24
UGC8
Trp W3.2%
UGA44
UGG76
Arg R1.9%
CGU26
CGC5
CGA17
CGG25
Gly G6.8%
GGU53
GGC33
GGA40
GGG134
Stop 0.2%
UAA6
UAG1
AGA0
AGG1
Genome map
37 annotated features in NC_082992.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,039 | 971 bp | + | 48.0% |
| tRNA-Val | Transfer RNA | 1,040 | 1,109 | 70 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,110 | 2,804 | 1,695 bp | + | 42.7% |
| tRNA-Leu (UUR) | Transfer RNA | 2,805 | 2,878 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,879 | 3,847 | 969 bp | + | 47.3% |
| tRNA-Ile | Transfer RNA | 3,857 | 3,929 | 73 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,929 | 3,999 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,999 | 4,067 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,069 | 5,113 | 1,045 bp | + | 49.3% |
| tRNA-Trp | Transfer RNA | 5,114 | 5,186 | 73 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,190 | 5,258 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,260 | 5,332 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,352 | 5,417 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,418 | 5,488 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,490 | 7,043 | 1,554 bp | + | 44.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,044 | 7,114 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,123 | 7,194 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,201 | 7,887 | 687 bp | + | 44.4% |
| tRNA-Lys | Transfer RNA | 7,893 | 7,967 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,969 | 8,139 | 171 bp | + | 38.0% |
| ATP6 | Protein-coding gene | 8,130 | 8,813 | 684 bp | + | 45.3% |
| COX3 | Protein-coding gene | 8,813 | 9,600 | 788 bp | + | 46.7% |
| tRNA-Gly | Transfer RNA | 9,601 | 9,671 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,672 | 10,020 | 349 bp | + | 42.7% |
| tRNA-Arg | Transfer RNA | 10,021 | 10,090 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,091 | 10,387 | 297 bp | + | 48.2% |
| ND4 | Protein-coding gene | 10,381 | 11,761 | 1,381 bp | + | 46.8% |
| tRNA-His | Transfer RNA | 11,762 | 11,830 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,831 | 11,899 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,901 | 11,973 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,974 | 13,815 | 1,842 bp | + | 43.8% |
| ND6 | Protein-coding gene | 13,812 | 14,333 | 522 bp | − | 48.9% |
| tRNA-Glu | Transfer RNA | 14,334 | 14,402 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,408 | 15,533 | 1,126 bp | + | 45.4% |
| tRNA-Thr | Transfer RNA | 15,534 | 15,604 | 71 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,617 | 15,686 | 70 bp | − | – |