Ambloplites rupestris

Rock bass

Maximum lifespan

18 yr

AnAge record

mtDNA size

16,659 bp

RefSeq NC_035659.1

GC content

47.24%

Whole genome

Non-coding

1,060 bp

D-loop 999 bp

Where Rock bass sits among 2,335 species

Whole-genome GC content against maximum lifespan. Rock bass has the 1,046th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,659 bp

GC skew (G − C) / (G + C): −0.253
AT skew (A − T) / (A + T): +0.014

Life history

Maximum lifespan: 18 years
Adult weight: 824 g

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 04117)

About this record

Lifespan source: AnAge build 15
Based on: an observed animal, origin not stated
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: New in build 2
In the database since: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,659 bp

Protein-coding11,407 bp

12S rRNA948 bp

16S rRNA1,692 bp

All tRNA1,552 bp

D-loop999 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Ambloplites rupestris genes

ND1NADH dehydrogenase subunit 1	975 bp	22.9%	27.3%	16.9%	32.9%	49.85%	−0.321	−0.088
ND2NADH dehydrogenase subunit 2	1,046 bp	25.8%	25.8%	13.5%	34.9%	48.38%	−0.443	0.000
COX1Cytochrome c oxidase subunit I	1,551 bp	23.1%	29.1%	19.4%	28.4%	47.78%	−0.188	−0.114
COX2Cytochrome c oxidase subunit II	691 bp	27.6%	28.1%	16.8%	27.5%	44.28%	−0.242	−0.008
ATP8ATP synthase F0 subunit 8	168 bp	28.6%	23.2%	11.9%	36.3%	48.21%	−0.506	+0.103
ATP6ATP synthase F0 subunit 6	684 bp	23.0%	27.5%	15.2%	34.4%	49.56%	−0.386	−0.090
COX3Cytochrome c oxidase subunit III	785 bp	23.4%	26.4%	18.2%	32.0%	50.19%	−0.274	−0.059
ND3NADH dehydrogenase subunit 3	349 bp	18.9%	28.7%	18.1%	34.4%	52.44%	−0.311	−0.205
ND4LNADH dehydrogenase subunit 4L	297 bp	23.6%	29.6%	15.2%	31.6%	46.80%	−0.353	−0.114
ND4NADH dehydrogenase subunit 4	1,381 bp	24.6%	27.0%	16.3%	32.1%	48.37%	−0.326	−0.046
ND5NADH dehydrogenase subunit 5	1,839 bp	26.8%	27.2%	15.1%	30.9%	46.00%	−0.343	−0.007
ND6NADH dehydrogenase subunit 6	522 bp	37.7%	15.3%	13.0%	33.9%	46.94%	−0.445	+0.422
CYTBCytochrome b	1,141 bp	21.5%	27.5%	17.2%	33.8%	51.01%	−0.326	−0.123
12S rRNA12S ribosomal RNA	948 bp	30.7%	21.4%	21.7%	26.2%	47.89%	−0.093	+0.178
16S rRNA16S ribosomal RNA	1,692 bp	32.2%	21.5%	21.0%	25.3%	46.28%	−0.093	+0.199
D-loopControl region (D-loop)	999 bp	31.9%	31.8%	17.0%	19.2%	36.24%	−0.061	+0.002

Codon usage

Counts per codon, darker is more frequent

Gene

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%

UUU117

UUC120

Leu L17.4%

UUA77

UUG38

CUU132

CUC181

CUA183

CUG51

Ile I7.0%

AUU156

AUC109

Met M4.0%

AUA86

AUG67

Val V5.8%

GUU61

GUC64

GUA52

GUG44

Ser S6.3%

UCU42

UCC69

UCA57

UCG14

AGU11

AGC46

Pro P5.9%

CCU45

CCC129

CCA37

CCG14

Thr T7.8%

ACU37

ACC136

ACA104

ACG19

Ala A9.4%

GCU57

GCC180

GCA98

GCG24

Tyr Y2.9%

UAU43

UAC67

His H2.8%

CAU27

CAC79

Gln Q2.5%

CAA75

CAG20

Asn N3.1%

AAU50

AAC68

Lys K1.9%

AAA55

AAG18

Asp D1.9%

GAU24

GAC50

Glu E2.7%

GAA68

GAG34

Cys C0.6%

UGU9

UGC15

Trp W3.2%

UGA87

UGG33

Arg R2.0%

CGU8

CGC17

CGA36

CGG16

Gly G6.4%

GGU29

GGC100

GGA56

GGG59

Stop 0.2%

UAA6

UAG1

AGA0

AGG0

Genome map

38 annotated features in NC_035659.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (47.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Ambloplites rupestris (NC_035659.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	68	68 bp	+	–
12S rRNA	Ribosomal RNA	69	1,016	948 bp	+	47.9%
tRNA-Val	Transfer RNA	1,017	1,088	72 bp	+	–
16S rRNA	Ribosomal RNA	1,089	2,780	1,692 bp	+	46.3%
tRNA-Leu (UUR)	Transfer RNA	2,781	2,854	74 bp	+	–
ND1	Protein-coding gene	2,855	3,829	975 bp	+	49.9%
tRNA-Ile	Transfer RNA	3,834	3,903	70 bp	+	–
tRNA-Gln	Transfer RNA	3,903	3,973	71 bp	−	–
tRNA-Met	Transfer RNA	3,973	4,041	69 bp	+	–
ND2	Protein-coding gene	4,042	5,087	1,046 bp	+	48.4%
tRNA-Trp	Transfer RNA	5,088	5,159	72 bp	+	–
tRNA-Ala	Transfer RNA	5,161	5,229	69 bp	−	–
tRNA-Asn	Transfer RNA	5,231	5,303	73 bp	−	–
tRNA-Cys	Transfer RNA	5,338	5,405	68 bp	−	–
tRNA-Tyr	Transfer RNA	5,405	5,474	70 bp	−	–
COX1	Protein-coding gene	5,476	7,026	1,551 bp	+	47.8%
tRNA-Ser (UCN)	Transfer RNA	7,027	7,097	71 bp	−	–
tRNA-Asp	Transfer RNA	7,101	7,173	73 bp	+	–
COX2	Protein-coding gene	7,182	7,872	691 bp	+	44.3%
tRNA-Lys	Transfer RNA	7,873	7,946	74 bp	+	–
ATP8	Protein-coding gene	7,948	8,115	168 bp	+	48.2%
ATP6	Protein-coding gene	8,106	8,789	684 bp	+	49.6%
COX3	Protein-coding gene	8,789	9,573	785 bp	+	50.2%
tRNA-Gly	Transfer RNA	9,574	9,645	72 bp	+	–
ND3	Protein-coding gene	9,646	9,994	349 bp	+	52.4%
tRNA-Arg	Transfer RNA	9,995	10,063	69 bp	+	–
ND4L	Protein-coding gene	10,064	10,360	297 bp	+	46.8%
ND4	Protein-coding gene	10,354	11,734	1,381 bp	+	48.4%
tRNA-His	Transfer RNA	11,735	11,803	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,804	11,871	68 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,876	11,948	73 bp	+	–
ND5	Protein-coding gene	11,949	13,787	1,839 bp	+	46.0%
ND6	Protein-coding gene	13,784	14,305	522 bp	−	46.9%
tRNA-Glu	Transfer RNA	14,306	14,374	69 bp	−	–
CYTB	Protein-coding gene	14,379	15,519	1,141 bp	+	51.0%
tRNA-Thr	Transfer RNA	15,520	15,591	72 bp	+	–
tRNA-Pro	Transfer RNA	15,591	15,660	70 bp	−	–
D-loop	Control region	15,661	16,659	999 bp	–	36.2%