Amphioctopus fangsiao
Gold-spot octopus
GC content
22.81%
Whole genome
Non-coding
1,061 bp
Including the D-loop
Where Gold-spot octopus sits among 2,335 species
Whole-genome GC content against maximum lifespan. Gold-spot octopus has the 2,322nd longest lifespan of them.
- This species
- All other species
Base composition
Whole genome15,957 bp
- GC skew (G − C) / (G + C)
- −0.355
- AT skew (A − T) / (A + T)
- +0.095
About this record
- Lifespan source
- SeaLifeBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome15,957 bp
Protein-coding11,126 bp
12S rRNA963 bp
16S rRNA1,338 bp
All tRNA1,477 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 942 bp | 28.03% | −0.485 | +0.304 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,038 bp | 17.92% | −0.376 | −0.038 | |||||
| COX1Cytochrome c oxidase subunit I | 1,533 bp | 30.07% | −0.106 | −0.110 | |||||
| COX2Cytochrome c oxidase subunit II | 687 bp | 27.07% | −0.290 | +0.038 | |||||
| ATP8ATP synthase F0 subunit 8 | 156 bp | 19.23% | −0.400 | +0.032 | |||||
| ATP6ATP synthase F0 subunit 6 | 693 bp | 24.24% | −0.357 | −0.196 | |||||
| COX3Cytochrome c oxidase subunit III | 780 bp | 27.69% | −0.157 | −0.067 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 22.79% | −0.375 | −0.173 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 22.90% | −0.676 | +0.284 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,344 bp | 21.80% | −0.529 | +0.245 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,693 bp | 21.15% | −0.419 | +0.191 | |||||
| ND6NADH dehydrogenase subunit 6 | 513 bp | 20.27% | −0.654 | +0.296 | |||||
| CYTBCytochrome b | 1,140 bp | 24.91% | −0.275 | +0.280 | |||||
| 12S rRNA12S ribosomal RNA | 963 bp | 20.67% | −0.437 | +0.134 | |||||
| 16S rRNA16S ribosomal RNA | 1,338 bp | 20.85% | −0.391 | +0.133 |
Codon usage
Counts per codon, darker is more frequent3,722 codons in all protein-coding genes. Grouped with the Invertebrate mitochondrial code (NCBI table 5).
Phe F9.3%
UUU314
UUC33
Leu L15.3%
UUA428
UUG62
CUU34
CUC7
CUA38
CUG1
Ile I9.9%
AUU341
AUC26
Met M8.5%
AUA268
AUG47
Val V5.5%
GUU110
GUC6
GUA75
GUG13
Ser S9.8%
UCU103
UCC22
UCA102
UCG5
AGU67
AGC3
AGA43
AGG18
Pro P3.3%
CCU75
CCC9
CCA35
CCG3
Thr T3.7%
ACU48
ACC11
ACA76
ACG2
Ala A3.2%
GCU55
GCC16
GCA41
GCG6
Tyr Y4.5%
UAU157
UAC10
His H2.1%
CAU62
CAC15
Gln Q1.6%
CAA50
CAG8
Asn N4.9%
AAU162
AAC21
Lys K2.7%
AAA85
AAG17
Asp D1.9%
GAU61
GAC8
Glu E2.1%
GAA65
GAG14
Cys C1.8%
UGU64
UGC2
Trp W2.6%
UGA85
UGG10
Arg R1.3%
CGU12
CGC2
CGA29
CGG7
Gly G5.9%
GGU86
GGC4
GGA95
GGG36
Stop 0.3%
UAA8
UAG4
Genome map
37 annotated features in NC_060722.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (22.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| COX3 | Protein-coding gene | 1 | 780 | 780 bp | + | 27.7% |
| tRNA-Lys | Transfer RNA | 786 | 853 | 68 bp | + | – |
| tRNA-Ala | Transfer RNA | 852 | 918 | 67 bp | + | – |
| tRNA-Arg | Transfer RNA | 918 | 982 | 65 bp | + | – |
| tRNA-Asn | Transfer RNA | 982 | 1,047 | 66 bp | + | – |
| tRNA-Ile | Transfer RNA | 1,048 | 1,114 | 67 bp | + | – |
| ND3 | Protein-coding gene | 1,115 | 1,465 | 351 bp | + | 22.8% |
| tRNA-Ser (AGY) | Transfer RNA | 1,464 | 1,532 | 69 bp | + | – |
| ND2 | Protein-coding gene | 1,533 | 2,570 | 1,038 bp | + | 17.9% |
| COX1 | Protein-coding gene | 2,542 | 4,074 | 1,533 bp | + | 30.1% |
| COX2 | Protein-coding gene | 4,078 | 4,764 | 687 bp | + | 27.1% |
| tRNA-Asp | Transfer RNA | 4,763 | 4,830 | 68 bp | + | – |
| ATP8 | Protein-coding gene | 4,831 | 4,986 | 156 bp | + | 19.2% |
| ATP6 | Protein-coding gene | 4,989 | 5,681 | 693 bp | + | 24.2% |
| tRNA-Phe | Transfer RNA | 5,706 | 5,772 | 67 bp | − | – |
| ND5 | Protein-coding gene | 5,773 | 7,465 | 1,693 bp | − | 21.2% |
| tRNA-His | Transfer RNA | 7,466 | 7,529 | 64 bp | − | – |
| ND4 | Protein-coding gene | 7,533 | 8,876 | 1,344 bp | − | 21.8% |
| ND4L | Protein-coding gene | 8,873 | 9,169 | 297 bp | − | 22.9% |
| tRNA-Thr | Transfer RNA | 9,175 | 9,239 | 65 bp | + | – |
| tRNA-Ser (UCN) | Transfer RNA | 9,249 | 9,310 | 62 bp | − | – |
| CYTB | Protein-coding gene | 9,307 | 10,446 | 1,140 bp | − | 24.9% |
| ND6 | Protein-coding gene | 10,439 | 10,951 | 513 bp | − | 20.3% |
| tRNA-Pro | Transfer RNA | 10,952 | 11,023 | 72 bp | − | – |
| ND1 | Protein-coding gene | 11,027 | 11,968 | 942 bp | − | 28.0% |
| tRNA-Leu (UUR) | Transfer RNA | 11,969 | 12,040 | 72 bp | − | – |
| tRNA-Leu (CUN) | Transfer RNA | 12,041 | 12,105 | 65 bp | − | – |
| 16S rRNA | Ribosomal RNA | 12,106 | 13,443 | 1,338 bp | − | 20.9% |
| tRNA-Val | Transfer RNA | 13,444 | 13,513 | 70 bp | − | – |
| 12S rRNA | Ribosomal RNA | 13,514 | 14,476 | 963 bp | − | 20.7% |
| tRNA-Met | Transfer RNA | 14,477 | 14,544 | 68 bp | − | – |
| tRNA-Cys | Transfer RNA | 14,548 | 14,613 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 14,614 | 14,678 | 65 bp | − | – |
| tRNA-Trp | Transfer RNA | 14,679 | 14,744 | 66 bp | − | – |
| tRNA-Gln | Transfer RNA | 14,745 | 14,812 | 68 bp | − | – |
| tRNA-Gly | Transfer RNA | 14,815 | 14,882 | 68 bp | − | – |
| tRNA-Glu | Transfer RNA | 14,884 | 14,956 | 73 bp | − | – |