MitoAge

Anguilla dieffenbachii

New Zealand longfin eel

Add to compare Download FASTA
Maximum lifespan
60 yr
AnAge record
mtDNA size
16,687 bp
RefSeq NC_006538.1
GC content
40.99%
Whole genome
Non-coding
1,029 bp
D-loop 961 bp

Where New Zealand longfin eel sits among 2,335 species

Whole-genome GC content against maximum lifespan. New Zealand longfin eel has the 89th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %New Zealand longfin eel
  • This species
  • Other ray-finned fishes
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,687 bp
GC skew (G − C) / (G + C)
−0.242
AT skew (A − T) / (A + T)
+0.147

Life history

Maximum lifespan
60 years
Adult weight
13 kg

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03795)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,687 bp
Protein-coding11,447 bp
12S rRNA947 bp
16S rRNA1,711 bp
All tRNA1,562 bp
D-loop961 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1972 bp32.8%26.1%13.2%27.9%41.05%−0.358+0.113
ND2NADH dehydrogenase subunit 21,045 bp37.6%23.4%12.9%26.0%38.95%−0.337+0.232
COX1Cytochrome c oxidase subunit I1,593 bp28.6%28.4%17.9%25.1%43.00%−0.168+0.004
COX2Cytochrome c oxidase subunit II691 bp32.9%25.5%16.5%25.2%41.68%−0.208+0.127
ATP8ATP synthase F0 subunit 8168 bp35.7%22.6%12.5%29.2%41.67%−0.400+0.224
ATP6ATP synthase F0 subunit 6683 bp31.9%28.4%12.7%26.9%39.68%−0.358+0.058
COX3Cytochrome c oxidase subunit III785 bp29.6%26.5%16.6%27.4%43.95%−0.246+0.055
ND3NADH dehydrogenase subunit 3349 bp27.8%30.4%14.0%27.8%41.83%−0.329−0.044
ND4LNADH dehydrogenase subunit 4L297 bp26.3%28.3%14.5%31.0%45.46%−0.363−0.037
ND4NADH dehydrogenase subunit 41,381 bp32.9%26.4%14.2%26.6%40.77%−0.304+0.110
ND5NADH dehydrogenase subunit 51,842 bp35.1%26.4%12.8%25.7%38.49%−0.334+0.140
ND6NADH dehydrogenase subunit 6522 bp45.2%14.0%11.1%29.7%40.81%−0.455+0.528
CYTBCytochrome b1,140 bp30.8%27.8%13.9%27.5%41.40%−0.331+0.051
12S rRNA12S ribosomal RNA947 bp33.9%19.5%21.2%25.3%46.57%−0.088+0.269
16S rRNA16S ribosomal RNA1,711 bp38.7%19.7%19.5%22.0%41.56%−0.060+0.326
D-loopControl region (D-loop)961 bp39.8%29.8%11.7%18.8%30.49%−0.235+0.144

Codon usage

Counts per codon, darker is more frequent

3,820 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU100
UUC129
Leu L15.6%
UUA110
UUG23
CUU83
CUC61
CUA283
CUG35
Ile I7.4%
AUU163
AUC121
Met M5.4%
AUA158
AUG49
Val V6.1%
GUU45
GUC33
GUA135
GUG19
Ser S5.8%
UCU31
UCC38
UCA99
UCG9
AGU8
AGC35
Pro P5.6%
CCU27
CCC31
CCA149
CCG7
Thr T7.9%
ACU42
ACC87
ACA164
ACG8
Ala A8.3%
GCU57
GCC128
GCA126
GCG7
Tyr Y3.3%
UAU65
UAC61
His H2.6%
CAU41
CAC59
Gln Q2.7%
CAA96
CAG6
Asn N3.5%
AAU39
AAC94
Lys K2.4%
AAA88
AAG5
Asp D2.1%
GAU27
GAC54
Glu E2.7%
GAA92
GAG12
Cys C0.8%
UGU17
UGC13
Trp W3.2%
UGA110
UGG11
Arg R2.0%
CGU12
CGC6
CGA51
CGG8
Gly G6.4%
GGU29
GGC51
GGA129
GGG37
Stop 0.2%
UAA5
UAG1
AGA0
AGG1

Genome map

38 annotated features in NC_006538.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (41.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA711,017947 bp+46.6%
tRNA-ValTransfer RNA1,0181,08871 bp+–
16S rRNARibosomal RNA1,0892,7991,711 bp+41.6%
tRNA-Leu (UUR)Transfer RNA2,8002,87576 bp+–
ND1Protein-coding gene2,8763,847972 bp+41.1%
tRNA-IleTransfer RNA3,8503,92172 bp+–
tRNA-GlnTransfer RNA3,9213,99171 bp+–
tRNA-MetTransfer RNA3,9914,05969 bp+–
ND2Protein-coding gene4,0605,1041,045 bp+39.0%
tRNA-TrpTransfer RNA5,1055,17672 bp+–
tRNA-AlaTransfer RNA5,1785,24669 bp−–
tRNA-AsnTransfer RNA5,2485,32073 bp−–
tRNA-CysTransfer RNA5,3615,42666 bp−–
tRNA-TyrTransfer RNA5,4275,49771 bp−–
COX1Protein-coding gene5,4997,0911,593 bp+43.0%
tRNA-Ser (UCN)Transfer RNA7,0837,15371 bp−–
tRNA-AspTransfer RNA7,1597,22870 bp+–
COX2Protein-coding gene7,2357,925691 bp+41.7%
tRNA-LysTransfer RNA7,9268,00176 bp+–
ATP8Protein-coding gene8,0038,170168 bp+41.7%
ATP6Protein-coding gene8,1618,843683 bp+39.7%
COX3Protein-coding gene8,8449,628785 bp+44.0%
tRNA-GlyTransfer RNA9,6299,69971 bp+–
ND3Protein-coding gene9,70010,048349 bp+41.8%
tRNA-ArgTransfer RNA10,04910,11971 bp+–
ND4LProtein-coding gene10,12010,416297 bp+45.5%
ND4Protein-coding gene10,41011,7901,381 bp+40.8%
tRNA-HisTransfer RNA11,79111,85969 bp+–
tRNA-Ser (AGY)Transfer RNA11,86011,93071 bp+–
tRNA-Leu (CUN)Transfer RNA11,93112,00373 bp+–
ND5Protein-coding gene12,00413,8451,842 bp+38.5%
ND6Protein-coding gene13,84214,363522 bp−40.8%
tRNA-GluTransfer RNA14,36414,43269 bp−–
CYTBProtein-coding gene14,43815,5771,140 bp+41.4%
tRNA-ThrTransfer RNA15,57815,65073 bp+–
tRNA-ProTransfer RNA15,65715,72670 bp−–
D-loopControl region15,72716,687961 bp–30.5%

Downloads