Anguilla mossambica

African longfin eel

Maximum lifespan

20 yr

AnAge record

mtDNA size

16,694 bp

RefSeq NC_006542.1

GC content

40.97%

Whole genome

Non-coding

1,032 bp

D-loop 971 bp

Where African longfin eel sits among 2,335 species

Whole-genome GC content against maximum lifespan. African longfin eel has the 891st longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,694 bp

GC skew (G − C) / (G + C): −0.250
AT skew (A − T) / (A + T): +0.153

Life history

Maximum lifespan: 20 years
Adult weight: 412.5 g

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03797)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,694 bp

Protein-coding11,447 bp

12S rRNA950 bp

16S rRNA1,710 bp

All tRNA1,564 bp

D-loop971 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Anguilla mossambica genes

ND1NADH dehydrogenase subunit 1	972 bp	32.6%	24.4%	13.7%	29.3%	43.00%	−0.364	+0.144
ND2NADH dehydrogenase subunit 2	1,045 bp	37.9%	22.6%	12.5%	27.0%	39.52%	−0.366	+0.253
COX1Cytochrome c oxidase subunit I	1,593 bp	28.8%	28.6%	17.5%	25.2%	42.69%	−0.179	+0.003
COX2Cytochrome c oxidase subunit II	691 bp	33.3%	25.3%	16.6%	24.7%	41.39%	−0.196	+0.136
ATP8ATP synthase F0 subunit 8	168 bp	36.3%	23.8%	12.5%	27.4%	39.88%	−0.373	+0.208
ATP6ATP synthase F0 subunit 6	683 bp	31.5%	28.6%	12.9%	27.1%	39.97%	−0.355	+0.049
COX3Cytochrome c oxidase subunit III	785 bp	29.9%	27.6%	16.3%	26.1%	42.42%	−0.231	+0.040
ND3NADH dehydrogenase subunit 3	349 bp	26.6%	31.5%	14.0%	27.8%	41.83%	−0.329	−0.084
ND4LNADH dehydrogenase subunit 4L	297 bp	27.9%	28.6%	14.1%	29.3%	43.43%	−0.349	−0.012
ND4NADH dehydrogenase subunit 4	1,381 bp	33.2%	26.1%	13.8%	27.0%	40.77%	−0.325	+0.120
ND5NADH dehydrogenase subunit 5	1,842 bp	35.3%	25.5%	12.6%	26.7%	39.25%	−0.358	+0.162
ND6NADH dehydrogenase subunit 6	522 bp	46.2%	14.4%	10.2%	29.3%	39.46%	−0.485	+0.525
CYTBCytochrome b	1,140 bp	30.6%	27.8%	14.0%	27.5%	41.58%	−0.325	+0.048
12S rRNA12S ribosomal RNA	950 bp	33.7%	20.3%	21.3%	24.7%	46.00%	−0.076	+0.248
16S rRNA16S ribosomal RNA	1,710 bp	39.4%	18.7%	19.1%	22.8%	41.93%	−0.088	+0.355
D-loopControl region (D-loop)	971 bp	40.1%	30.6%	11.3%	18.0%	29.35%	−0.228	+0.134

Codon usage

Counts per codon, darker is more frequent

Gene

3,820 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%

UUU100

UUC128

Leu L15.7%

UUA111

UUG23

CUU78

CUC67

CUA280

CUG40

Ile I7.3%

AUU147

AUC133

Met M5.5%

AUA163

AUG46

Val V6.2%

GUU51

GUC34

GUA132

GUG18

Ser S5.8%

UCU31

UCC38

UCA108

UCG4

AGU10

AGC32

Pro P5.6%

CCU22

CCC30

CCA159

CCG3

Thr T7.8%

ACU49

ACC75

ACA164

ACG11

Ala A8.2%

GCU51

GCC129

GCA128

GCG6

Tyr Y3.3%

UAU58

UAC67

His H2.6%

CAU35

CAC66

Gln Q2.6%

CAA93

CAG7

Asn N3.5%

AAU36

AAC98

Lys K2.5%

AAA92

AAG2

Asp D2.1%

GAU22

GAC59

Glu E2.7%

GAA92

GAG12

Cys C0.8%

UGU15

UGC15

Trp W3.2%

UGA106

UGG15

Arg R2.0%

CGU15

CGC3

CGA51

CGG7

Gly G6.4%

GGU35

GGC52

GGA130

GGG29

Stop 0.2%

UAA5

UAG1

AGA0

AGG1

Genome map

38 annotated features in NC_006542.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (41.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Anguilla mossambica (NC_006542.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	70	70 bp	+	–
12S rRNA	Ribosomal RNA	71	1,020	950 bp	+	46.0%
tRNA-Val	Transfer RNA	1,021	1,092	72 bp	+	–
16S rRNA	Ribosomal RNA	1,093	2,802	1,710 bp	+	41.9%
tRNA-Leu (UUR)	Transfer RNA	2,803	2,878	76 bp	+	–
ND1	Protein-coding gene	2,879	3,850	972 bp	+	43.0%
tRNA-Ile	Transfer RNA	3,853	3,924	72 bp	+	–
tRNA-Gln	Transfer RNA	3,924	3,994	71 bp	+	–
tRNA-Met	Transfer RNA	3,994	4,062	69 bp	+	–
ND2	Protein-coding gene	4,063	5,107	1,045 bp	+	39.5%
tRNA-Trp	Transfer RNA	5,108	5,179	72 bp	+	–
tRNA-Ala	Transfer RNA	5,181	5,249	69 bp	−	–
tRNA-Asn	Transfer RNA	5,251	5,323	73 bp	−	–
tRNA-Cys	Transfer RNA	5,360	5,425	66 bp	−	–
tRNA-Tyr	Transfer RNA	5,426	5,496	71 bp	−	–
COX1	Protein-coding gene	5,498	7,090	1,593 bp	+	42.7%
tRNA-Ser (UCN)	Transfer RNA	7,082	7,152	71 bp	−	–
tRNA-Asp	Transfer RNA	7,158	7,227	70 bp	+	–
COX2	Protein-coding gene	7,234	7,924	691 bp	+	41.4%
tRNA-Lys	Transfer RNA	7,925	8,000	76 bp	+	–
ATP8	Protein-coding gene	8,002	8,169	168 bp	+	39.9%
ATP6	Protein-coding gene	8,160	8,842	683 bp	+	40.0%
COX3	Protein-coding gene	8,843	9,627	785 bp	+	42.4%
tRNA-Gly	Transfer RNA	9,628	9,699	72 bp	+	–
ND3	Protein-coding gene	9,700	10,048	349 bp	+	41.8%
tRNA-Arg	Transfer RNA	10,049	10,119	71 bp	+	–
ND4L	Protein-coding gene	10,120	10,416	297 bp	+	43.4%
ND4	Protein-coding gene	10,410	11,790	1,381 bp	+	40.8%
tRNA-His	Transfer RNA	11,791	11,859	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,860	11,930	71 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,931	12,003	73 bp	+	–
ND5	Protein-coding gene	12,004	13,845	1,842 bp	+	39.3%
ND6	Protein-coding gene	13,842	14,363	522 bp	−	39.5%
tRNA-Glu	Transfer RNA	14,364	14,432	69 bp	−	–
CYTB	Protein-coding gene	14,437	15,576	1,140 bp	+	41.6%
tRNA-Thr	Transfer RNA	15,577	15,649	73 bp	+	–
tRNA-Pro	Transfer RNA	15,654	15,723	70 bp	−	–
D-loop	Control region	15,724	16,694	971 bp	–	29.4%