Anodonta anatina
Duck mussel
GC content
33.99%
Whole genome
Non-coding
1,028 bp
Including the D-loop
Where Duck mussel sits among 2,335 species
Whole-genome GC content against maximum lifespan. Duck mussel has the 1,166th longest lifespan of them.
- This species
- All other species
Base composition
Whole genome15,653 bp
- GC skew (G − C) / (G + C)
- −0.299
- AT skew (A − T) / (A + T)
- +0.155
About this record
- Lifespan source
- SeaLifeBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome15,653 bp
Protein-coding11,072 bp
12S rRNA848 bp
16S rRNA1,279 bp
All tRNA1,426 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 855 bp | 34.50% | −0.227 | −0.086 | |||||
| ND2NADH dehydrogenase subunit 2 | 964 bp | 31.64% | −0.285 | −0.038 | |||||
| COX1Cytochrome c oxidase subunit I | 1,542 bp | 36.19% | −0.233 | +0.350 | |||||
| COX2Cytochrome c oxidase subunit II | 681 bp | 37.89% | −0.411 | +0.267 | |||||
| ATP8ATP synthase F0 subunit 8 | 192 bp | 25.52% | −0.469 | +0.091 | |||||
| ATP6ATP synthase F0 subunit 6 | 702 bp | 34.33% | −0.419 | +0.358 | |||||
| COX3Cytochrome c oxidase subunit III | 780 bp | 38.46% | −0.327 | +0.342 | |||||
| ND3NADH dehydrogenase subunit 3 | 357 bp | 38.10% | −0.500 | +0.376 | |||||
| ND4LNADH dehydrogenase subunit 4L | 279 bp | 37.63% | −0.676 | +0.402 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,347 bp | 33.48% | −0.379 | +0.290 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,737 bp | 33.51% | −0.423 | +0.247 | |||||
| ND6NADH dehydrogenase subunit 6 | 489 bp | 31.49% | −0.338 | −0.093 | |||||
| CYTBCytochrome b | 1,155 bp | 34.89% | −0.266 | −0.109 | |||||
| 12S rRNA12S ribosomal RNA | 848 bp | 36.20% | −0.107 | +0.187 | |||||
| 16S rRNA16S ribosomal RNA | 1,279 bp | 34.25% | −0.128 | +0.113 |
Codon usage
Counts per codon, darker is more frequent3,693 codons in all protein-coding genes. Grouped with the Invertebrate mitochondrial code (NCBI table 5).
Phe F7.8%
UUU246
UUC41
Leu L15.4%
UUA249
UUG142
CUU78
CUC19
CUA66
CUG15
Ile I7.4%
AUU228
AUC46
Met M5.5%
AUA142
AUG61
Val V8.7%
GUU154
GUC18
GUA100
GUG48
Ser S10.5%
UCU125
UCC21
UCA54
UCG7
AGU56
AGC19
AGA56
AGG51
Pro P3.6%
CCU72
CCC8
CCA46
CCG6
Thr T4.5%
ACU73
ACC29
ACA56
ACG9
Ala A5.6%
GCU130
GCC23
GCA46
GCG8
Tyr Y3.7%
UAU97
UAC40
His H2.0%
CAU58
CAC15
Gln Q1.7%
CAA40
CAG22
Asn N2.8%
AAU74
AAC29
Lys K2.5%
AAA60
AAG31
Asp D1.7%
GAU53
GAC11
Glu E2.4%
GAA41
GAG46
Cys C1.3%
UGU41
UGC8
Trp W2.9%
UGA54
UGG54
Arg R1.7%
CGU18
CGC2
CGA34
CGG8
Gly G8.0%
GGU115
GGC19
GGA79
GGG84
Stop 0.3%
UAA8
UAG4
Genome map
37 annotated features in NC_022803.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (34.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Gln | Transfer RNA | 18 | 86 | 69 bp | + | – |
| tRNA-Cys | Transfer RNA | 110 | 174 | 65 bp | + | – |
| tRNA-Ile | Transfer RNA | 180 | 246 | 67 bp | + | – |
| tRNA-Val | Transfer RNA | 247 | 309 | 63 bp | + | – |
| tRNA-Leu | Transfer RNA | 310 | 373 | 64 bp | + | – |
| ND1 | Protein-coding gene | 419 | 1,273 | 855 bp | + | 34.5% |
| tRNA-Gly | Transfer RNA | 1,274 | 1,336 | 63 bp | + | – |
| ND6 | Protein-coding gene | 1,356 | 1,844 | 489 bp | + | 31.5% |
| ND4 | Protein-coding gene | 1,879 | 3,225 | 1,347 bp | − | 33.5% |
| ND4L | Protein-coding gene | 3,218 | 3,496 | 279 bp | − | 37.6% |
| ATP8 | Protein-coding gene | 3,515 | 3,706 | 192 bp | − | 25.5% |
| tRNA-Asp | Transfer RNA | 3,707 | 3,770 | 64 bp | − | – |
| ATP6 | Protein-coding gene | 3,790 | 4,491 | 702 bp | − | 34.3% |
| COX3 | Protein-coding gene | 4,512 | 5,291 | 780 bp | − | 38.5% |
| COX1 | Protein-coding gene | 5,316 | 6,857 | 1,542 bp | − | 36.2% |
| COX2 | Protein-coding gene | 6,884 | 7,564 | 681 bp | − | 37.9% |
| ND3 | Protein-coding gene | 7,577 | 7,933 | 357 bp | − | 38.1% |
| tRNA-His | Transfer RNA | 7,999 | 8,061 | 63 bp | − | – |
| tRNA-Ala | Transfer RNA | 8,130 | 8,193 | 64 bp | + | – |
| tRNA-Ser | Transfer RNA | 8,196 | 8,259 | 64 bp | + | – |
| tRNA-Ser | Transfer RNA | 8,262 | 8,331 | 70 bp | + | – |
| tRNA-Glu | Transfer RNA | 8,337 | 8,402 | 66 bp | + | – |
| ND2 | Protein-coding gene | 8,705 | 9,668 | 964 bp | + | 31.6% |
| tRNA-Met | Transfer RNA | 9,669 | 9,736 | 68 bp | + | – |
| tRNA-Trp | Transfer RNA | 9,743 | 9,805 | 63 bp | + | – |
| tRNA-Arg | Transfer RNA | 9,810 | 9,873 | 64 bp | + | – |
| 12S rRNA | Ribosomal RNA | 9,874 | 10,721 | 848 bp | + | 36.2% |
| tRNA-Lys | Transfer RNA | 10,722 | 10,788 | 67 bp | + | – |
| tRNA-Thr | Transfer RNA | 10,789 | 10,850 | 62 bp | + | – |
| tRNA-Tyr | Transfer RNA | 10,860 | 10,919 | 60 bp | + | – |
| 16S rRNA | Ribosomal RNA | 10,920 | 12,198 | 1,279 bp | + | 34.3% |
| tRNA-Leu | Transfer RNA | 12,199 | 12,261 | 63 bp | + | – |
| tRNA-Asn | Transfer RNA | 12,271 | 12,336 | 66 bp | + | – |
| tRNA-Pro | Transfer RNA | 12,339 | 12,403 | 65 bp | + | – |
| CYTB | Protein-coding gene | 12,404 | 13,558 | 1,155 bp | + | 34.9% |
| tRNA-Phe | Transfer RNA | 13,559 | 13,624 | 66 bp | + | – |
| ND5 | Protein-coding gene | 13,677 | 15,413 | 1,737 bp | − | 33.5% |