Anoplopoma fimbria

Sablefish

Maximum lifespan

114 yr

AnAge record

mtDNA size

16,507 bp

RefSeq NC_018119.1

GC content

47.93%

Whole genome

Non-coding

910 bp

D-loop 909 bp

Where Sablefish sits among 2,335 species

Whole-genome GC content against maximum lifespan. Sablefish has the 19th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,507 bp

GC skew (G − C) / (G + C): −0.235
AT skew (A − T) / (A + T): +0.000

Life history

Maximum lifespan: 114 years
Adult weight: 31.4 kg
Female sexual maturity: 6 years

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 04481)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Updated in build 2
In the database since: build 1 (2015-07-01)
Last changed: build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome16,507 bp

Protein-coding11,407 bp

12S rRNA945 bp

16S rRNA1,694 bp

All tRNA1,551 bp

D-loop909 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Anoplopoma fimbria genes

ND1NADH dehydrogenase subunit 1	975 bp	20.8%	29.5%	17.9%	31.7%	49.64%	−0.277	−0.173
ND2NADH dehydrogenase subunit 2	1,046 bp	24.3%	26.3%	15.1%	34.3%	49.43%	−0.389	−0.040
COX1Cytochrome c oxidase subunit I	1,551 bp	24.1%	28.9%	18.5%	28.5%	47.00%	−0.213	−0.090
COX2Cytochrome c oxidase subunit II	691 bp	27.1%	26.9%	17.2%	28.8%	46.02%	−0.252	+0.003
ATP8ATP synthase F0 subunit 8	168 bp	27.4%	25.6%	14.9%	32.1%	47.02%	−0.367	+0.034
ATP6ATP synthase F0 subunit 6	684 bp	23.8%	27.8%	14.8%	33.6%	48.39%	−0.390	−0.076
COX3Cytochrome c oxidase subunit III	785 bp	23.2%	28.3%	19.1%	29.4%	48.54%	−0.213	−0.099
ND3NADH dehydrogenase subunit 3	349 bp	17.8%	29.2%	18.9%	34.1%	53.01%	−0.286	−0.244
ND4LNADH dehydrogenase subunit 4L	297 bp	20.5%	28.6%	17.2%	33.7%	50.84%	−0.325	−0.164
ND4NADH dehydrogenase subunit 4	1,381 bp	22.6%	25.9%	17.8%	33.7%	51.56%	−0.309	−0.067
ND5NADH dehydrogenase subunit 5	1,839 bp	25.0%	27.8%	16.0%	31.3%	47.25%	−0.323	−0.054
ND6NADH dehydrogenase subunit 6	522 bp	33.7%	13.8%	19.3%	33.1%	52.49%	−0.263	+0.419
CYTBCytochrome b	1,141 bp	22.1%	28.6%	17.2%	32.2%	49.34%	−0.304	−0.128
12S rRNA12S ribosomal RNA	945 bp	30.5%	21.1%	22.5%	25.9%	48.47%	−0.070	+0.183
16S rRNA16S ribosomal RNA	1,694 bp	32.5%	21.3%	21.2%	25.0%	46.16%	−0.082	+0.208
D-loopControl region (D-loop)	909 bp	32.3%	28.7%	16.4%	22.6%	38.94%	−0.158	+0.059

Codon usage

Counts per codon, darker is more frequent

Gene

3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%

UUU109

UUC121

Leu L17.5%

UUA67

UUG27

CUU170

CUC179

CUA145

CUG78

Ile I6.5%

AUU137

AUC110

Met M3.7%

AUA54

AUG85

Val V6.3%

GUU71

GUC61

GUA82

GUG27

Ser S6.7%

UCU51

UCC76

UCA52

UCG16

AGU14

AGC46

Pro P5.8%

CCU57

CCC116

CCA39

CCG10

Thr T7.7%

ACU45

ACC128

ACA92

ACG27

Ala A9.4%

GCU54

GCC166

GCA112

GCG24

Tyr Y2.9%

UAU42

UAC69

His H2.9%

CAU33

CAC76

Gln Q2.5%

CAA67

CAG28

Asn N3.0%

AAU30

AAC83

Lys K1.9%

AAA57

AAG14

Asp D2.0%

GAU26

GAC51

Glu E2.6%

GAA67

GAG31

Cys C0.7%

UGU8

UGC17

Trp W3.2%

UGA92

UGG28

Arg R2.1%

CGU12

CGC20

CGA35

CGG12

Gly G6.7%

GGU39

GGC91

GGA54

GGG70

Stop 0.2%

UAA7

UAG0

AGA0

AGG0

Genome map

38 annotated features in NC_018119.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (47.9%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Anoplopoma fimbria (NC_018119.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	68	68 bp	+	–
12S rRNA	Ribosomal RNA	69	1,013	945 bp	+	48.5%
tRNA-Val	Transfer RNA	1,014	1,085	72 bp	+	–
16S rRNA	Ribosomal RNA	1,086	2,779	1,694 bp	+	46.2%
tRNA-Leu (UUR)	Transfer RNA	2,780	2,853	74 bp	+	–
ND1	Protein-coding gene	2,854	3,828	975 bp	+	49.6%
tRNA-Ile	Transfer RNA	3,833	3,902	70 bp	+	–
tRNA-Gln	Transfer RNA	3,902	3,972	71 bp	−	–
tRNA-Met	Transfer RNA	3,972	4,040	69 bp	+	–
ND2	Protein-coding gene	4,041	5,086	1,046 bp	+	49.4%
tRNA-Trp	Transfer RNA	5,087	5,157	71 bp	+	–
tRNA-Ala	Transfer RNA	5,159	5,227	69 bp	−	–
tRNA-Asn	Transfer RNA	5,229	5,301	73 bp	−	–
tRNA-Cys	Transfer RNA	5,341	5,406	66 bp	−	–
tRNA-Tyr	Transfer RNA	5,412	5,481	70 bp	−	–
COX1	Protein-coding gene	5,483	7,033	1,551 bp	+	47.0%
tRNA-Ser (UCN)	Transfer RNA	7,034	7,104	71 bp	−	–
tRNA-Asp	Transfer RNA	7,108	7,180	73 bp	+	–
COX2	Protein-coding gene	7,188	7,878	691 bp	+	46.0%
tRNA-Lys	Transfer RNA	7,879	7,952	74 bp	+	–
ATP8	Protein-coding gene	7,954	8,121	168 bp	+	47.0%
ATP6	Protein-coding gene	8,112	8,795	684 bp	+	48.4%
COX3	Protein-coding gene	8,795	9,579	785 bp	+	48.5%
tRNA-Gly	Transfer RNA	9,580	9,651	72 bp	+	–
ND3	Protein-coding gene	9,652	10,000	349 bp	+	53.0%
tRNA-Arg	Transfer RNA	10,001	10,069	69 bp	+	–
ND4L	Protein-coding gene	10,070	10,366	297 bp	+	50.8%
ND4	Protein-coding gene	10,360	11,740	1,381 bp	+	51.6%
tRNA-His	Transfer RNA	11,741	11,809	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,810	11,876	67 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	11,881	11,953	73 bp	+	–
ND5	Protein-coding gene	11,954	13,792	1,839 bp	+	47.3%
ND6	Protein-coding gene	13,789	14,310	522 bp	−	52.5%
tRNA-Glu	Transfer RNA	14,311	14,379	69 bp	−	–
CYTB	Protein-coding gene	14,385	15,525	1,141 bp	+	49.3%
tRNA-Thr	Transfer RNA	15,526	15,598	73 bp	+	–
tRNA-Pro	Transfer RNA	15,598	15,668	71 bp	−	–
D-loop	Control region	15,599	16,507	909 bp	–	38.9%