Anyperodon leucogrammicus
Slender grouper
GC content
44.33%
Whole genome
Non-coding
997 bp
D-loop 916 bp
Where Slender grouper sits among 2,335 species
Whole-genome GC content against maximum lifespan. Slender grouper has the 563rd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,616 bp
- GC skew (G − C) / (G + C)
- −0.294
- AT skew (A − T) / (A + T)
- +0.033
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an estimate, not an observed animal
- Data quality
- low
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,616 bp
Protein-coding11,406 bp
12S rRNA953 bp
16S rRNA1,706 bp
All tRNA1,554 bp
D-loop916 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 46.15% | −0.436 | −0.002 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 45.17% | −0.508 | +0.082 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 44.36% | −0.201 | −0.126 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.43% | −0.244 | +0.026 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 46.43% | −0.410 | −0.022 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 43.42% | −0.461 | −0.023 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 43.82% | −0.267 | −0.070 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 43.27% | −0.351 | −0.222 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.16% | −0.342 | −0.126 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.27% | −0.402 | −0.005 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 43.99% | −0.389 | −0.006 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 44.83% | −0.410 | +0.417 | |||||
| CYTBCytochrome b | 1,141 bp | 47.24% | −0.358 | −0.090 | |||||
| 12S rRNA12S ribosomal RNA | 953 bp | 48.69% | −0.138 | +0.194 | |||||
| 16S rRNA16S ribosomal RNA | 1,706 bp | 45.43% | −0.117 | +0.235 | |||||
| D-loopControl region (D-loop) | 916 bp | 30.24% | −0.162 | +0.002 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.4%
UUU107
UUC138
Leu L17.2%
UUA106
UUG16
CUU146
CUC163
CUA196
CUG29
Ile I7.1%
AUU134
AUC137
Met M3.9%
AUA96
AUG54
Val V5.8%
GUU78
GUC51
GUA67
GUG23
Ser S6.4%
UCU43
UCC76
UCA63
UCG7
AGU13
AGC41
Pro P5.8%
CCU73
CCC85
CCA58
CCG4
Thr T8.1%
ACU61
ACC113
ACA129
ACG7
Ala A9.0%
GCU79
GCC132
GCA122
GCG9
Tyr Y2.9%
UAU40
UAC69
His H2.8%
CAU29
CAC78
Gln Q2.5%
CAA82
CAG14
Asn N3.1%
AAU37
AAC82
Lys K2.0%
AAA68
AAG9
Asp D2.0%
GAU30
GAC47
Glu E2.5%
GAA80
GAG17
Cys C0.7%
UGU10
UGC17
Trp W3.1%
UGA105
UGG12
Arg R2.1%
CGU12
CGC17
CGA43
CGG8
Gly G6.3%
GGU53
GGC74
GGA73
GGG38
Stop 0.2%
UAA7
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_012709.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,022 | 953 bp | + | 48.7% |
| tRNA-Val | Transfer RNA | 1,023 | 1,092 | 70 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,094 | 2,799 | 1,706 bp | + | 45.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,800 | 2,875 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,876 | 3,850 | 975 bp | + | 46.2% |
| tRNA-Ile | Transfer RNA | 3,856 | 3,924 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,924 | 3,994 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,995 | 4,063 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,064 | 5,108 | 1,045 bp | + | 45.2% |
| tRNA-Trp | Transfer RNA | 5,109 | 5,178 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,180 | 5,248 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,249 | 5,321 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,360 | 5,426 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,427 | 5,496 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,498 | 7,048 | 1,551 bp | + | 44.4% |
| tRNA-Ser (UCN) | Transfer RNA | 7,050 | 7,120 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,124 | 7,196 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,205 | 7,895 | 691 bp | + | 44.4% |
| tRNA-Lys | Transfer RNA | 7,896 | 7,969 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,971 | 8,138 | 168 bp | + | 46.4% |
| ATP6 | Protein-coding gene | 8,129 | 8,812 | 684 bp | + | 43.4% |
| COX3 | Protein-coding gene | 8,812 | 9,596 | 785 bp | + | 43.8% |
| tRNA-Gly | Transfer RNA | 9,597 | 9,668 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,669 | 10,017 | 349 bp | + | 43.3% |
| tRNA-Arg | Transfer RNA | 10,018 | 10,086 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,087 | 10,383 | 297 bp | + | 49.2% |
| ND4 | Protein-coding gene | 10,377 | 11,757 | 1,381 bp | + | 46.3% |
| tRNA-His | Transfer RNA | 11,758 | 11,827 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,838 | 11,902 | 65 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,908 | 11,980 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,981 | 13,819 | 1,839 bp | + | 44.0% |
| ND6 | Protein-coding gene | 13,816 | 14,337 | 522 bp | − | 44.8% |
| tRNA-Glu | Transfer RNA | 14,338 | 14,407 | 70 bp | − | – |
| CYTB | Protein-coding gene | 14,415 | 15,555 | 1,141 bp | + | 47.2% |
| tRNA-Thr | Transfer RNA | 15,556 | 15,629 | 74 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,630 | 15,700 | 71 bp | − | – |
| D-loop | Control region | 15,701 | 16,616 | 916 bp | – | 30.2% |