Aplysia dactylomela
Black spotted seahare
GC content
33.65%
Whole genome
Non-coding
199 bp
Including the D-loop
Where Black spotted seahare sits among 2,335 species
Whole-genome GC content against maximum lifespan. Black spotted seahare has the 2,311th longest lifespan of them.
- This species
- All other species
Base composition
Whole genome14,128 bp
- GC skew (G − C) / (G + C)
- +0.072
- AT skew (A − T) / (A + T)
- −0.122
About this record
- Lifespan source
- SeaLifeBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome14,128 bp
Protein-coding10,862 bp
12S rRNA723 bp
16S rRNA1,028 bp
All tRNA1,338 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 915 bp | 32.28% | +0.193 | −0.299 | |||||
| ND2NADH dehydrogenase subunit 2 | 939 bp | 34.08% | +0.081 | −0.250 | |||||
| COX1Cytochrome c oxidase subunit I | 1,548 bp | 35.53% | +0.073 | −0.242 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 32.46% | +0.135 | −0.104 | |||||
| ATP8ATP synthase F0 subunit 8 | 153 bp | 23.53% | 0.000 | −0.026 | |||||
| ATP6ATP synthase F0 subunit 6 | 666 bp | 34.23% | 0.000 | +0.160 | |||||
| COX3Cytochrome c oxidase subunit III | 778 bp | 36.38% | −0.053 | +0.188 | |||||
| ND3NADH dehydrogenase subunit 3 | 367 bp | 29.97% | +0.036 | +0.276 | |||||
| ND4LNADH dehydrogenase subunit 4L | 286 bp | 31.47% | 0.000 | −0.296 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,311 bp | 33.56% | +0.018 | −0.231 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,650 bp | 32.28% | +0.158 | −0.186 | |||||
| ND6NADH dehydrogenase subunit 6 | 465 bp | 32.69% | +0.184 | −0.297 | |||||
| CYTBCytochrome b | 1,123 bp | 33.39% | +0.013 | −0.257 | |||||
| 12S rRNA12S ribosomal RNA | 723 bp | 34.72% | −0.076 | −0.140 | |||||
| 16S rRNA16S ribosomal RNA | 1,028 bp | 32.13% | +0.152 | +0.019 |
Codon usage
Counts per codon, darker is more frequent3,624 codons in all protein-coding genes. Grouped with the Invertebrate mitochondrial code (NCBI table 5).
Phe F8.7%
UUU231
UUC84
Leu L16.2%
UUA278
UUG86
CUU116
CUC23
CUA67
CUG18
Ile I6.7%
AUU208
AUC35
Met M4.9%
AUA126
AUG52
Val V8.1%
GUU115
GUC18
GUA119
GUG41
Ser S10.7%
UCU136
UCC27
UCA50
UCG9
AGU62
AGC25
AGA66
AGG14
Pro P4.0%
CCU100
CCC6
CCA32
CCG6
Thr T4.6%
ACU95
ACC14
ACA45
ACG12
Ala A6.2%
GCU138
GCC30
GCA37
GCG18
Tyr Y3.6%
UAU94
UAC35
His H2.1%
CAU60
CAC15
Gln Q1.6%
CAA39
CAG18
Asn N3.1%
AAU84
AAC28
Lys K2.4%
AAA59
AAG27
Asp D1.8%
GAU54
GAC12
Glu E2.5%
GAA64
GAG25
Cys C1.3%
UGU42
UGC6
Trp W2.6%
UGA77
UGG17
Arg R1.5%
CGU15
CGC0
CGA31
CGG10
Gly G7.3%
GGU75
GGC3
GGA146
GGG40
Stop 0.2%
UAA6
UAG3
Genome map
36 annotated features in NC_015088.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA21
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (33.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 36 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| COX1 | Protein-coding gene | 59 | 1,606 | 1,548 bp | + | 35.5% |
| tRNA-Val | Transfer RNA | 1,587 | 1,651 | 65 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,652 | 2,679 | 1,028 bp | + | 32.1% |
| tRNA-Leu (CUN) | Transfer RNA | 2,680 | 2,745 | 66 bp | + | – |
| tRNA-Ala | Transfer RNA | 2,758 | 2,822 | 65 bp | + | – |
| tRNA-Pro | Transfer RNA | 2,827 | 2,887 | 61 bp | + | – |
| ND6 | Protein-coding gene | 2,889 | 3,353 | 465 bp | + | 32.7% |
| ND5 | Protein-coding gene | 3,376 | 5,025 | 1,650 bp | + | 32.3% |
| ND1 | Protein-coding gene | 5,003 | 5,917 | 915 bp | + | 32.3% |
| tRNA-Tyr | Transfer RNA | 5,919 | 5,985 | 67 bp | + | – |
| tRNA-Trp | Transfer RNA | 5,979 | 6,044 | 66 bp | + | – |
| ND4L | Protein-coding gene | 6,049 | 6,334 | 286 bp | + | 31.5% |
| CYTB | Protein-coding gene | 6,335 | 7,457 | 1,123 bp | + | 33.4% |
| tRNA-Asp | Transfer RNA | 7,459 | 7,526 | 68 bp | + | – |
| tRNA-Phe | Transfer RNA | 7,528 | 7,593 | 66 bp | + | – |
| COX2 | Protein-coding gene | 7,594 | 8,277 | 684 bp | + | 32.5% |
| tRNA-Gly | Transfer RNA | 8,280 | 8,343 | 64 bp | + | – |
| tRNA-His | Transfer RNA | 8,350 | 8,415 | 66 bp | + | – |
| tRNA-Gln | Transfer RNA | 8,425 | 8,485 | 61 bp | − | – |
| tRNA-Leu (UUR) | Transfer RNA | 8,485 | 8,548 | 64 bp | − | – |
| ATP8 | Protein-coding gene | 8,551 | 8,703 | 153 bp | − | 23.5% |
| tRNA-Asn | Transfer RNA | 8,707 | 8,773 | 67 bp | − | – |
| tRNA-Cys | Transfer RNA | 8,777 | 8,840 | 64 bp | + | – |
| ATP6 | Protein-coding gene | 8,839 | 9,504 | 666 bp | − | 34.2% |
| tRNA-Arg | Transfer RNA | 9,506 | 9,573 | 68 bp | − | – |
| tRNA-Glu | Transfer RNA | 9,579 | 9,642 | 64 bp | − | – |
| 12S rRNA | Ribosomal RNA | 9,646 | 10,368 | 723 bp | − | 34.7% |
| tRNA-Met | Transfer RNA | 10,369 | 10,432 | 64 bp | − | – |
| ND3 | Protein-coding gene | 10,433 | 10,799 | 367 bp | − | 30.0% |
| tRNA-Ser (UCN) | Transfer RNA | 10,800 | 10,853 | 54 bp | − | – |
| tRNA-Ser (AGY) | Transfer RNA | 10,856 | 10,914 | 59 bp | + | – |
| ND4 | Protein-coding gene | 10,915 | 12,225 | 1,311 bp | + | 33.6% |
| tRNA-Thr | Transfer RNA | 12,233 | 12,296 | 64 bp | − | – |
| COX3 | Protein-coding gene | 12,297 | 13,074 | 778 bp | − | 36.4% |
| tRNA-Ile | Transfer RNA | 13,125 | 13,187 | 63 bp | + | – |
| ND2 | Protein-coding gene | 13,189 | 14,127 | 939 bp | + | 34.1% |