MitoAge

Apodemus sylvaticus

Long-tailed field mouse

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Maximum lifespan
6.3 yr
AnAge record
mtDNA size
16,308 bp
RefSeq NC_049122.1
GC content
36.45%
Whole genome
Non-coding
953 bp
D-loop 874 bp

Where Long-tailed field mouse sits among 2,335 species

Whole-genome GC content against maximum lifespan. Long-tailed field mouse has the 1,890th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Long-tailed field mouse
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,308 bp
GC skew (G − C) / (G + C)
−0.314
AT skew (A − T) / (A + T)
+0.074

Life history

Maximum lifespan
6.3 years
Adult weight
23.4 g
Birth weight
1.5 g
Basal metabolic rate
0.264 W
Body temperature
36.7 °C
Female sexual maturity
71 days
Male sexual maturity
65 days
Gestation or incubation
23 days
Litter or clutch size
5.2
Litters per year
3.8

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 03024)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,308 bp
Protein-coding11,331 bp
12S rRNA958 bp
16S rRNA1,569 bp
All tRNA1,500 bp
D-loop874 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp31.2%30.9%11.5%26.4%37.91%−0.392+0.005
ND2NADH dehydrogenase subunit 21,036 bp37.0%28.6%8.0%26.4%34.46%−0.535+0.128
COX1Cytochrome c oxidase subunit I1,545 bp29.5%31.1%15.9%23.5%39.42%−0.192−0.026
COX2Cytochrome c oxidase subunit II684 bp34.2%26.9%12.9%26.0%38.89%−0.338+0.120
ATP8ATP synthase F0 subunit 8204 bp36.8%31.4%5.4%26.5%31.86%−0.662+0.079
ATP6ATP synthase F0 subunit 6681 bp32.6%31.6%10.1%25.7%35.83%−0.434+0.016
COX3Cytochrome c oxidase subunit III784 bp30.4%29.1%14.2%26.4%40.56%−0.302+0.021
ND3NADH dehydrogenase subunit 3348 bp33.0%33.3%10.6%23.0%33.62%−0.368−0.004
ND4LNADH dehydrogenase subunit 4L297 bp30.6%29.0%10.8%29.6%40.40%−0.467+0.028
ND4NADH dehydrogenase subunit 41,378 bp34.5%29.6%9.9%26.1%35.92%−0.451+0.076
ND5NADH dehydrogenase subunit 51,830 bp33.6%31.0%10.3%25.1%35.41%−0.420+0.041
ND6NADH dehydrogenase subunit 6519 bp42.6%22.5%6.4%28.5%34.88%−0.635+0.308
CYTBCytochrome b1,144 bp31.2%30.6%12.2%26.0%38.20%−0.359+0.010
12S rRNA12S ribosomal RNA958 bp37.0%25.2%17.4%20.5%37.89%−0.080+0.190
16S rRNA16S ribosomal RNA1,569 bp38.7%27.1%16.8%17.5%34.23%−0.020+0.176
D-loopControl region (D-loop)874 bp31.6%33.5%11.8%23.1%34.90%−0.325−0.030

Codon usage

Counts per codon, darker is more frequent

3,800 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU123
UUC114
Leu L15.7%
UUA124
UUG15
CUU108
CUC67
CUA266
CUG16
Ile I9.8%
AUU239
AUC135
Met M6.1%
AUA186
AUG45
Val V4.5%
GUU36
GUC29
GUA95
GUG12
Ser S8.3%
UCU54
UCC50
UCA146
UCG4
AGU24
AGC36
Pro P5.2%
CCU45
CCC29
CCA120
CCG3
Thr T7.7%
ACU75
ACC57
ACA155
ACG6
Ala A6.1%
GCU58
GCC80
GCA93
GCG2
Tyr Y3.5%
UAU66
UAC68
His H2.5%
CAU32
CAC64
Gln Q2.2%
CAA76
CAG8
Asn N4.3%
AAU52
AAC111
Lys K2.6%
AAA97
AAG2
Asp D1.9%
GAU27
GAC44
Glu E2.5%
GAA80
GAG15
Cys C0.7%
UGU14
UGC14
Trp W2.7%
UGA99
UGG5
Arg R1.7%
CGU10
CGC11
CGA42
CGG1
Gly G5.4%
GGU28
GGC36
GGA121
GGG22
Stop 0.2%
UAA6
UAG2
AGA0
AGG0

Genome map

38 annotated features in NC_049122.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (36.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA26867 bp+–
12S rRNARibosomal RNA701,027958 bp+37.9%
tRNA-ValTransfer RNA1,0281,09568 bp+–
16S rRNARibosomal RNA1,0962,6641,569 bp+34.2%
tRNA-Leu (UUR)Transfer RNA2,6652,73975 bp+–
ND1Protein-coding gene2,7403,694955 bp+37.9%
tRNA-IleTransfer RNA3,6953,76369 bp+–
tRNA-GlnTransfer RNA3,7613,83171 bp−–
tRNA-MetTransfer RNA3,8393,90769 bp+–
ND2Protein-coding gene3,9084,9431,036 bp+34.5%
tRNA-TrpTransfer RNA4,9445,01269 bp+–
tRNA-AlaTransfer RNA5,0145,08269 bp−–
tRNA-AsnTransfer RNA5,0845,15471 bp−–
tRNA-CysTransfer RNA5,1875,25468 bp−–
tRNA-TyrTransfer RNA5,2565,32368 bp−–
COX1Protein-coding gene5,3256,8691,545 bp+39.4%
tRNA-Ser (UCN)Transfer RNA6,8676,93569 bp−–
tRNA-AspTransfer RNA6,9397,00668 bp+–
COX2Protein-coding gene7,0087,691684 bp+38.9%
tRNA-LysTransfer RNA7,6957,75864 bp+–
ATP8Protein-coding gene7,7607,963204 bp+31.9%
ATP6Protein-coding gene7,9218,601681 bp+35.8%
COX3Protein-coding gene8,6019,384784 bp+40.6%
tRNA-GlyTransfer RNA9,3859,45369 bp+–
ND3Protein-coding gene9,4549,801348 bp+33.6%
tRNA-ArgTransfer RNA9,8039,87169 bp+–
ND4LProtein-coding gene9,87310,169297 bp+40.4%
ND4Protein-coding gene10,16311,5401,378 bp+35.9%
tRNA-HisTransfer RNA11,54111,60767 bp+–
tRNA-Ser (AGY)Transfer RNA11,60811,66659 bp+–
tRNA-Leu (CUN)Transfer RNA11,66611,73671 bp+–
ND5Protein-coding gene11,73713,5661,830 bp+35.4%
ND6Protein-coding gene13,54414,062519 bp−34.9%
tRNA-GluTransfer RNA14,06314,13169 bp−–
CYTBProtein-coding gene14,13515,2781,144 bp+38.2%
tRNA-ThrTransfer RNA15,27915,34668 bp+–
tRNA-ProTransfer RNA15,34715,41367 bp−–
D-loopControl region15,41416,287874 bp–34.9%

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