MitoAge

Arenaria interpres

Ruddy turnstone

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Maximum lifespan
22.3 yr
AnAge record
mtDNA size
16,725 bp
RefSeq NC_003712.2
GC content
44.66%
Whole genome
Non-coding
1,239 bp
D-loop 1,172 bp

Where Ruddy turnstone sits among 2,335 species

Whole-genome GC content against maximum lifespan. Ruddy turnstone has the 772nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Ruddy turnstone
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,725 bp
GC skew (G − C) / (G + C)
−0.376
AT skew (A − T) / (A + T)
+0.107

Life history

Maximum lifespan
22.3 years
Adult weight
136 g
Birth weight
11.4 g
Basal metabolic rate
0.92 W
Female sexual maturity
2 years
Male sexual maturity
2 years
Gestation or incubation
22 days
Litter or clutch size
4
Litters per year
1
Postnatal growth rate
0.114 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 00513)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,725 bp
Protein-coding11,378 bp
12S rRNA970 bp
16S rRNA1,595 bp
All tRNA1,560 bp
D-loop1,172 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp27.4%27.9%13.3%31.4%44.68%−0.405−0.009
ND2NADH dehydrogenase subunit 21,041 bp31.8%25.6%10.4%32.3%42.65%−0.514+0.109
COX1Cytochrome c oxidase subunit I1,551 bp27.1%26.6%16.2%30.0%46.23%−0.297+0.010
COX2Cytochrome c oxidase subunit II684 bp29.8%24.9%15.2%30.1%45.32%−0.329+0.091
ATP8ATP synthase F0 subunit 8168 bp32.1%25.6%6.0%36.3%42.26%−0.718+0.113
ATP6ATP synthase F0 subunit 6684 bp27.5%27.0%9.6%35.8%45.47%−0.576+0.008
COX3Cytochrome c oxidase subunit III784 bp27.9%25.5%16.1%30.5%46.56%−0.310+0.045
ND3NADH dehydrogenase subunit 3351 bp29.3%25.1%12.0%33.6%45.58%−0.475+0.079
ND4LNADH dehydrogenase subunit 4L297 bp25.6%27.9%14.1%32.3%46.47%−0.391−0.044
ND4NADH dehydrogenase subunit 41,378 bp30.9%23.9%10.4%34.8%45.21%−0.541+0.128
ND5NADH dehydrogenase subunit 51,815 bp32.0%24.4%11.5%32.2%43.64%−0.475+0.134
ND6NADH dehydrogenase subunit 6522 bp42.3%13.4%9.0%35.2%44.25%−0.593+0.519
CYTBCytochrome b1,143 bp29.0%24.4%12.5%34.1%46.63%−0.463+0.085
12S rRNA12S ribosomal RNA970 bp31.0%21.6%20.2%27.1%47.32%−0.146+0.178
16S rRNA16S ribosomal RNA1,595 bp34.3%22.6%18.2%24.9%43.14%−0.154+0.206
D-loopControl region (D-loop)1,172 bp29.5%27.0%13.8%29.6%43.43%−0.363+0.044

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU54
UUC166
Leu L17.4%
UUA92
UUG25
CUU67
CUC144
CUA298
CUG35
Ile I7.6%
AUU102
AUC188
Met M4.7%
AUA140
AUG38
Val V4.4%
GUU34
GUC50
GUA64
GUG20
Ser S7.5%
UCU42
UCC81
UCA97
UCG7
AGU15
AGC42
Pro P5.8%
CCU41
CCC70
CCA102
CCG7
Thr T9.1%
ACU71
ACC151
ACA119
ACG6
Ala A7.9%
GCU64
GCC135
GCA91
GCG11
Tyr Y3.1%
UAU38
UAC81
His H2.7%
CAU29
CAC75
Gln Q2.4%
CAA84
CAG8
Asn N3.4%
AAU23
AAC108
Lys K2.3%
AAA78
AAG8
Asp D1.6%
GAU14
GAC48
Glu E2.4%
GAA81
GAG12
Cys C0.8%
UGU10
UGC20
Trp W2.8%
UGA100
UGG6
Arg R1.9%
CGU6
CGC25
CGA38
CGG2
Gly G5.9%
GGU37
GGC64
GGA93
GGG30
Stop 0.3%
UAA6
UAG2
AGA1
AGG2

Genome map

38 annotated features in NC_003712.2

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (44.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
D-loopControl region11,1721,172 bp–43.4%
tRNA-PheTransfer RNA1,1731,24371 bp+–
12S rRNARibosomal RNA1,2442,213970 bp+47.3%
tRNA-ValTransfer RNA2,2142,28471 bp+–
16S rRNARibosomal RNA2,2853,8791,595 bp+43.1%
tRNA-Leu (UUR)Transfer RNA3,8803,95374 bp+–
ND1Protein-coding gene3,9704,947978 bp+44.7%
tRNA-IleTransfer RNA4,9485,01770 bp+–
tRNA-GlnTransfer RNA5,0265,09671 bp−–
tRNA-MetTransfer RNA5,0965,16469 bp+–
ND2Protein-coding gene5,1656,2051,041 bp+42.7%
tRNA-TrpTransfer RNA6,2046,27673 bp+–
tRNA-AlaTransfer RNA6,2786,34669 bp−–
tRNA-AsnTransfer RNA6,3506,42273 bp−–
tRNA-CysTransfer RNA6,4256,49167 bp−–
tRNA-TyrTransfer RNA6,4916,56171 bp−–
COX1Protein-coding gene6,5638,1131,551 bp+46.2%
tRNA-Ser (UCN)Transfer RNA8,0998,17880 bp−–
tRNA-AspTransfer RNA8,1818,24969 bp+–
COX2Protein-coding gene8,2518,934684 bp+45.3%
tRNA-LysTransfer RNA8,9369,00671 bp+–
ATP8Protein-coding gene9,0089,175168 bp+42.3%
ATP6Protein-coding gene9,1669,849684 bp+45.5%
COX3Protein-coding gene9,84910,632784 bp+46.6%
tRNA-GlyTransfer RNA10,63310,70169 bp+–
ND3Protein-coding gene10,70211,053352 bp+45.6%
tRNA-ArgTransfer RNA11,05811,12770 bp+–
ND4LProtein-coding gene11,12811,424297 bp+46.5%
ND4Protein-coding gene11,41812,7951,378 bp+45.2%
tRNA-HisTransfer RNA12,79612,86469 bp+–
tRNA-Ser (AGY)Transfer RNA12,86612,93065 bp+–
tRNA-Leu (CUN)Transfer RNA12,93113,00171 bp+–
ND5Protein-coding gene13,00214,8161,815 bp+43.6%
CYTBProtein-coding gene14,83015,9721,143 bp+46.6%
tRNA-ThrTransfer RNA15,97416,05077 bp+–
tRNA-ProTransfer RNA16,05116,12070 bp−–
ND6Protein-coding gene16,12916,650522 bp−44.3%
tRNA-GluTransfer RNA16,65416,72572 bp−–

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