Arripis trutta

Australian salmon

Maximum lifespan

26 yr

AnAge record

mtDNA size

17,244 bp

RefSeq NC_015787.1

GC content

44.53%

Whole genome

Non-coding

1,572 bp

D-loop 1,413 bp

Where Australian salmon sits among 2,335 species

Whole-genome GC content against maximum lifespan. Australian salmon has the 586th longest lifespan of them.

This species
Other ray-finned fishes
Other classes

Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,244 bp

GC skew (G − C) / (G + C): −0.259
AT skew (A − T) / (A + T): +0.022

Life history

Maximum lifespan: 26 years
Adult weight: 5.2 kg

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 04101)

About this record

Lifespan source: AnAge build 15
Based on: an animal in the wild
Data quality: acceptable, medium sample
Licence: Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status: Unchanged since build 1
In the database since: build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq

Whole genome17,244 bp

Protein-coding11,422 bp

12S rRNA1,002 bp

16S rRNA1,696 bp

All tRNA1,552 bp

D-loop1,413 bp

Genes and regions

Select a column to sort; select a gene to compare it across species

Base composition of Arripis trutta genes

ND1NADH dehydrogenase subunit 1	975 bp	24.6%	28.4%	15.0%	32.0%	46.97%	−0.362	−0.072
ND2NADH dehydrogenase subunit 2	1,046 bp	25.0%	26.2%	14.3%	34.5%	48.85%	−0.413	−0.024
COX1Cytochrome c oxidase subunit I	1,551 bp	25.0%	30.4%	18.1%	26.6%	44.62%	−0.191	−0.099
COX2Cytochrome c oxidase subunit II	691 bp	28.2%	28.9%	16.2%	26.6%	42.84%	−0.243	−0.013
ATP8ATP synthase F0 subunit 8	168 bp	29.2%	25.0%	11.3%	34.5%	45.83%	−0.506	+0.077
ATP6ATP synthase F0 subunit 6	683 bp	24.5%	28.8%	13.6%	33.1%	46.71%	−0.417	−0.082
COX3Cytochrome c oxidase subunit III	785 bp	24.7%	27.3%	17.1%	31.0%	48.03%	−0.289	−0.049
ND3NADH dehydrogenase subunit 3	349 bp	21.8%	32.4%	15.8%	30.1%	45.85%	−0.313	−0.196
ND4LNADH dehydrogenase subunit 4L	297 bp	21.5%	29.3%	16.8%	32.3%	49.16%	−0.315	−0.152
ND4NADH dehydrogenase subunit 4	1,381 bp	26.3%	26.6%	16.1%	31.0%	47.07%	−0.317	−0.007
ND5NADH dehydrogenase subunit 5	1,854 bp	26.4%	26.2%	14.8%	32.6%	47.41%	−0.374	+0.005
ND6NADH dehydrogenase subunit 6	522 bp	36.0%	16.9%	15.5%	31.6%	47.13%	−0.341	+0.362
CYTBCytochrome b	1,141 bp	23.7%	29.4%	15.5%	31.5%	46.98%	−0.340	−0.107
12S rRNA12S ribosomal RNA	1,002 bp	31.5%	22.8%	21.2%	24.6%	45.71%	−0.074	+0.162
16S rRNA16S ribosomal RNA	1,696 bp	32.8%	21.7%	20.6%	24.9%	45.46%	−0.095	+0.204
D-loopControl region (D-loop)	1,413 bp	40.7%	35.5%	9.6%	14.2%	23.78%	−0.190	+0.068

Codon usage

Counts per codon, darker is more frequent

Gene

3,811 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%

UUU93

UUC142

Leu L17.0%

UUA99

UUG24

CUU150

CUC155

CUA174

CUG44

Ile I7.0%

AUU141

AUC125

Met M4.1%

AUA88

AUG67

Val V5.9%

GUU58

GUC69

GUA72

GUG27

Ser S6.5%

UCU42

UCC75

UCA66

UCG10

AGU14

AGC41

Pro P6.0%

CCU73

CCC86

CCA56

CCG15

Thr T8.1%

ACU69

ACC111

ACA107

ACG20

Ala A9.4%

GCU82

GCC157

GCA102

GCG17

Tyr Y3.0%

UAU40

UAC74

His H2.5%

CAU32

CAC64

Gln Q2.4%

CAA70

CAG22

Asn N3.1%

AAU33

AAC84

Lys K1.9%

AAA65

AAG8

Asp D2.0%

GAU19

GAC58

Glu E2.6%

GAA76

GAG23

Cys C0.7%

UGU8

UGC20

Trp W3.0%

UGA98

UGG18

Arg R2.1%

CGU8

CGC17

CGA42

CGG13

Gly G6.4%

GGU40

GGC82

GGA73

GGG47

Stop 0.2%

UAA6

UAG0

AGA0

AGG0

Genome map

38 annotated features in NC_015787.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

Protein-coding13
rRNA2
tRNA22
D-loop1

Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
Middle ring: GC% of each gene against the whole genome (44.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).

All 38 features as a table

Annotated features of Arripis trutta (NC_015787.1)
Feature	Type	Start	End	Length	Strand	GC
tRNA-Phe	Transfer RNA	1	68	68 bp	+	–
12S rRNA	Ribosomal RNA	69	1,070	1,002 bp	+	45.7%
tRNA-Val	Transfer RNA	1,071	1,142	72 bp	+	–
16S rRNA	Ribosomal RNA	1,143	2,838	1,696 bp	+	45.5%
tRNA-Leu (UUR)	Transfer RNA	2,839	2,912	74 bp	+	–
ND1	Protein-coding gene	2,913	3,887	975 bp	+	47.0%
tRNA-Ile	Transfer RNA	3,892	3,963	72 bp	+	–
tRNA-Gln	Transfer RNA	4,053	4,123	71 bp	−	–
tRNA-Met	Transfer RNA	4,123	4,191	69 bp	+	–
ND2	Protein-coding gene	4,192	5,237	1,046 bp	+	48.9%
tRNA-Trp	Transfer RNA	5,238	5,308	71 bp	+	–
tRNA-Ala	Transfer RNA	5,311	5,379	69 bp	−	–
tRNA-Asn	Transfer RNA	5,381	5,453	73 bp	−	–
tRNA-Cys	Transfer RNA	5,492	5,557	66 bp	−	–
tRNA-Tyr	Transfer RNA	5,558	5,624	67 bp	−	–
COX1	Protein-coding gene	5,626	7,176	1,551 bp	+	44.6%
tRNA-Ser (UCN)	Transfer RNA	7,177	7,247	71 bp	−	–
tRNA-Asp	Transfer RNA	7,251	7,322	72 bp	+	–
COX2	Protein-coding gene	7,331	8,021	691 bp	+	42.8%
tRNA-Lys	Transfer RNA	8,022	8,095	74 bp	+	–
ATP8	Protein-coding gene	8,097	8,264	168 bp	+	45.8%
ATP6	Protein-coding gene	8,255	8,937	683 bp	+	46.7%
COX3	Protein-coding gene	8,938	9,722	785 bp	+	48.0%
tRNA-Gly	Transfer RNA	9,723	9,794	72 bp	+	–
ND3	Protein-coding gene	9,795	10,143	349 bp	+	45.9%
tRNA-Arg	Transfer RNA	10,144	10,212	69 bp	+	–
ND4L	Protein-coding gene	10,213	10,509	297 bp	+	49.2%
ND4	Protein-coding gene	10,503	11,883	1,381 bp	+	47.1%
tRNA-His	Transfer RNA	11,884	11,952	69 bp	+	–
tRNA-Ser (AGY)	Transfer RNA	11,954	12,021	68 bp	+	–
tRNA-Leu (CUN)	Transfer RNA	12,028	12,098	71 bp	+	–
ND5	Protein-coding gene	12,099	13,952	1,854 bp	+	47.4%
ND6	Protein-coding gene	13,949	14,470	522 bp	−	47.1%
tRNA-Glu	Transfer RNA	14,471	14,540	70 bp	−	–
CYTB	Protein-coding gene	14,546	15,686	1,141 bp	+	47.0%
tRNA-Thr	Transfer RNA	15,687	15,759	73 bp	+	–
tRNA-Pro	Transfer RNA	15,759	15,831	73 bp	−	–
D-loop	Control region	15,832	17,244	1,413 bp	–	23.8%