Blanus cinereus

Mediterranean worm lizard, or Spanish grey amphisbaena

GC content
44.32%
Whole genome
Non-coding
1,646 bp
D-loop 1,170 bp

Where Mediterranean worm lizard, or Spanish grey amphisbaena sits among 2,335 species

Whole-genome GC content against maximum lifespan. Mediterranean worm lizard, or Spanish grey amphisbaena has the 1,158th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Mediterranean worm lizard, or Spanish grey amphisbaena
  • This species
  • Other reptiles
  • Other classes

Base composition

Whole genome16,969 bp
GC skew (G − C) / (G + C)
−0.362
AT skew (A − T) / (A + T)
+0.158

Life history

Maximum lifespan
16 years
Adult weight
6 g

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03292)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,969 bp
Protein-coding11,354 bp
12S rRNA955 bp
16S rRNA1,513 bp
All tRNA1,501 bp
D-loop1,170 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Base composition of Blanus cinereus genes
Composition
ND1NADH dehydrogenase subunit 1966 bp32.3%24.0%12.5%31.2%43.69%−0.427+0.147
ND2NADH dehydrogenase subunit 21,040 bp35.1%21.1%10.9%33.0%43.85%−0.504+0.250
COX1Cytochrome c oxidase subunit I1,536 bp28.2%25.7%17.0%29.2%46.16%−0.264+0.047
COX2Cytochrome c oxidase subunit II685 bp33.0%22.5%14.0%30.5%44.53%−0.370+0.189
ATP8ATP synthase F0 subunit 8165 bp33.3%24.8%11.5%30.3%41.82%−0.449+0.146
ATP6ATP synthase F0 subunit 6681 bp30.5%26.3%11.7%31.4%43.17%−0.456+0.075
COX3Cytochrome c oxidase subunit III784 bp27.9%26.4%15.7%30.0%45.66%−0.313+0.028
ND3NADH dehydrogenase subunit 3346 bp26.3%27.2%15.9%30.6%46.53%−0.317−0.016
ND4LNADH dehydrogenase subunit 4L297 bp31.6%26.3%12.5%29.6%42.09%−0.408+0.093
ND4NADH dehydrogenase subunit 41,374 bp32.6%24.2%9.8%33.4%43.16%−0.548+0.147
ND5NADH dehydrogenase subunit 51,809 bp33.9%23.5%11.0%31.5%42.51%−0.482+0.181
ND6NADH dehydrogenase subunit 6540 bp42.8%12.4%10.4%34.4%44.82%−0.537+0.550
CYTBCytochrome b1,154 bp30.3%26.0%12.6%31.1%43.67%−0.425+0.077
12S rRNA12S ribosomal RNA955 bp31.1%18.2%19.7%31.0%50.68%−0.223+0.261
16S rRNA16S ribosomal RNA1,513 bp36.0%21.2%17.2%25.6%42.83%−0.198+0.260
D-loopControl region (D-loop)1,170 bp31.6%28.2%13.8%26.3%40.17%−0.311+0.057

Codon usage

Counts per codon, darker is more frequent

3,790 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.3%
UUU90
UUC112
Leu L16.4%
UUA92
UUG19
CUU88
CUC134
CUA252
CUG38
Ile I8.3%
AUU146
AUC170
Met M5.6%
AUA170
AUG42
Val V4.4%
GUU28
GUC41
GUA77
GUG20
Ser S5.9%
UCU13
UCC45
UCA101
UCG16
AGU8
AGC42
Pro P5.4%
CCU19
CCC32
CCA138
CCG16
Thr T11.3%
ACU47
ACC149
ACA215
ACG17
Ala A8.1%
GCU31
GCC122
GCA148
GCG7
Tyr Y3.0%
UAU35
UAC77
His H3.0%
CAU28
CAC85
Gln Q2.7%
CAA88
CAG13
Asn N3.2%
AAU28
AAC92
Lys K2.1%
AAA75
AAG5
Asp D1.7%
GAU14
GAC49
Glu E2.2%
GAA72
GAG10
Cys C0.8%
UGU10
UGC19
Trp W2.7%
UGA87
UGG16
Arg R2.0%
CGU10
CGC31
CGA26
CGG8
Gly G5.8%
GGU30
GGC116
GGA49
GGG24
Stop 0.2%
UAA5
UAG2
AGA1
AGG0

Genome map

38 annotated features in NC_012433.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (44.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
Annotated features of Blanus cinereus (NC_012433.1)
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA711,025955 bp+50.7%
tRNA-ValTransfer RNA1,0261,09267 bp+–
16S rRNARibosomal RNA1,0932,6051,513 bp+42.8%
tRNA-Leu (UUR)Transfer RNA2,6062,68075 bp+–
ND1Protein-coding gene2,6823,647966 bp+43.7%
tRNA-IleTransfer RNA3,6483,71770 bp+–
tRNA-GlnTransfer RNA3,7183,78871 bp−–
tRNA-MetTransfer RNA3,7883,85568 bp+–
ND2Protein-coding gene3,8564,8951,040 bp+43.9%
tRNA-TrpTransfer RNA4,8964,96166 bp+–
tRNA-AlaTransfer RNA4,9625,03069 bp−–
tRNA-AsnTransfer RNA5,0325,10473 bp−–
tRNA-CysTransfer RNA5,1335,19058 bp−–
tRNA-TyrTransfer RNA5,1925,26271 bp−–
COX1Protein-coding gene5,2646,7991,536 bp+46.2%
tRNA-Ser (UCN)Transfer RNA6,8036,87371 bp−–
tRNA-AspTransfer RNA6,8806,94667 bp+–
COX2Protein-coding gene6,9477,631685 bp+44.5%
tRNA-LysTransfer RNA7,6327,69766 bp+–
ATP8Protein-coding gene7,6997,863165 bp+41.8%
ATP6Protein-coding gene7,8548,534681 bp+43.2%
COX3Protein-coding gene8,5349,317784 bp+45.7%
tRNA-GlyTransfer RNA9,3189,38871 bp+–
ND3Protein-coding gene9,3899,734346 bp+46.5%
tRNA-ArgTransfer RNA9,7359,79763 bp+–
ND4LProtein-coding gene9,80310,099297 bp+42.1%
ND4Protein-coding gene10,09311,4661,374 bp+43.2%
tRNA-HisTransfer RNA11,46711,53569 bp+–
tRNA-Ser (AGY)Transfer RNA11,53611,60166 bp+–
tRNA-Leu (CUN)Transfer RNA11,60111,67171 bp+–
ND5Protein-coding gene11,67513,4831,809 bp+42.5%
ND6Protein-coding gene13,47914,018540 bp−44.8%
tRNA-GluTransfer RNA14,02214,08968 bp−–
CYTBProtein-coding gene14,09115,2441,154 bp+43.7%
tRNA-ThrTransfer RNA15,24615,31368 bp+–
tRNA-ProTransfer RNA15,73515,79965 bp−–
D-loopControl region15,80016,9691,170 bp–40.2%