Blanus cinereus
Mediterranean worm lizard, or Spanish grey amphisbaena
GC content
44.32%
Whole genome
Non-coding
1,646 bp
D-loop 1,170 bp
Where Mediterranean worm lizard, or Spanish grey amphisbaena sits among 2,335 species
Whole-genome GC content against maximum lifespan. Mediterranean worm lizard, or Spanish grey amphisbaena has the 1,158th longest lifespan of them.
- This species
- Other reptiles
- Other classes
Base composition
Whole genome16,969 bp
- GC skew (G − C) / (G + C)
- −0.362
- AT skew (A − T) / (A + T)
- +0.158
Life history
- Maximum lifespan
- 16 years
- Adult weight
- 6 g
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03292)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, small sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Updated in build 2
- In the database since
- build 1 (2015-07-01)
- Last changed
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,969 bp
Protein-coding11,354 bp
12S rRNA955 bp
16S rRNA1,513 bp
All tRNA1,501 bp
D-loop1,170 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 966 bp | 43.69% | −0.427 | +0.147 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,040 bp | 43.85% | −0.504 | +0.250 | |||||
| COX1Cytochrome c oxidase subunit I | 1,536 bp | 46.16% | −0.264 | +0.047 | |||||
| COX2Cytochrome c oxidase subunit II | 685 bp | 44.53% | −0.370 | +0.189 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 41.82% | −0.449 | +0.146 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 43.17% | −0.456 | +0.075 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 45.66% | −0.313 | +0.028 | |||||
| ND3NADH dehydrogenase subunit 3 | 346 bp | 46.53% | −0.317 | −0.016 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 42.09% | −0.408 | +0.093 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,374 bp | 43.16% | −0.548 | +0.147 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,809 bp | 42.51% | −0.482 | +0.181 | |||||
| ND6NADH dehydrogenase subunit 6 | 540 bp | 44.82% | −0.537 | +0.550 | |||||
| CYTBCytochrome b | 1,154 bp | 43.67% | −0.425 | +0.077 | |||||
| 12S rRNA12S ribosomal RNA | 955 bp | 50.68% | −0.223 | +0.261 | |||||
| 16S rRNA16S ribosomal RNA | 1,513 bp | 42.83% | −0.198 | +0.260 | |||||
| D-loopControl region (D-loop) | 1,170 bp | 40.17% | −0.311 | +0.057 |
Codon usage
Counts per codon, darker is more frequent3,790 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.3%
UUU90
UUC112
Leu L16.4%
UUA92
UUG19
CUU88
CUC134
CUA252
CUG38
Ile I8.3%
AUU146
AUC170
Met M5.6%
AUA170
AUG42
Val V4.4%
GUU28
GUC41
GUA77
GUG20
Ser S5.9%
UCU13
UCC45
UCA101
UCG16
AGU8
AGC42
Pro P5.4%
CCU19
CCC32
CCA138
CCG16
Thr T11.3%
ACU47
ACC149
ACA215
ACG17
Ala A8.1%
GCU31
GCC122
GCA148
GCG7
Tyr Y3.0%
UAU35
UAC77
His H3.0%
CAU28
CAC85
Gln Q2.7%
CAA88
CAG13
Asn N3.2%
AAU28
AAC92
Lys K2.1%
AAA75
AAG5
Asp D1.7%
GAU14
GAC49
Glu E2.2%
GAA72
GAG10
Cys C0.8%
UGU10
UGC19
Trp W2.7%
UGA87
UGG16
Arg R2.0%
CGU10
CGC31
CGA26
CGG8
Gly G5.8%
GGU30
GGC116
GGA49
GGG24
Stop 0.2%
UAA5
UAG2
AGA1
AGG0
Genome map
38 annotated features in NC_012433.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 71 | 1,025 | 955 bp | + | 50.7% |
| tRNA-Val | Transfer RNA | 1,026 | 1,092 | 67 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,093 | 2,605 | 1,513 bp | + | 42.8% |
| tRNA-Leu (UUR) | Transfer RNA | 2,606 | 2,680 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,682 | 3,647 | 966 bp | + | 43.7% |
| tRNA-Ile | Transfer RNA | 3,648 | 3,717 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,718 | 3,788 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,788 | 3,855 | 68 bp | + | – |
| ND2 | Protein-coding gene | 3,856 | 4,895 | 1,040 bp | + | 43.9% |
| tRNA-Trp | Transfer RNA | 4,896 | 4,961 | 66 bp | + | – |
| tRNA-Ala | Transfer RNA | 4,962 | 5,030 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,032 | 5,104 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,133 | 5,190 | 58 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,192 | 5,262 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,264 | 6,799 | 1,536 bp | + | 46.2% |
| tRNA-Ser (UCN) | Transfer RNA | 6,803 | 6,873 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 6,880 | 6,946 | 67 bp | + | – |
| COX2 | Protein-coding gene | 6,947 | 7,631 | 685 bp | + | 44.5% |
| tRNA-Lys | Transfer RNA | 7,632 | 7,697 | 66 bp | + | – |
| ATP8 | Protein-coding gene | 7,699 | 7,863 | 165 bp | + | 41.8% |
| ATP6 | Protein-coding gene | 7,854 | 8,534 | 681 bp | + | 43.2% |
| COX3 | Protein-coding gene | 8,534 | 9,317 | 784 bp | + | 45.7% |
| tRNA-Gly | Transfer RNA | 9,318 | 9,388 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,389 | 9,734 | 346 bp | + | 46.5% |
| tRNA-Arg | Transfer RNA | 9,735 | 9,797 | 63 bp | + | – |
| ND4L | Protein-coding gene | 9,803 | 10,099 | 297 bp | + | 42.1% |
| ND4 | Protein-coding gene | 10,093 | 11,466 | 1,374 bp | + | 43.2% |
| tRNA-His | Transfer RNA | 11,467 | 11,535 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,536 | 11,601 | 66 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,601 | 11,671 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,675 | 13,483 | 1,809 bp | + | 42.5% |
| ND6 | Protein-coding gene | 13,479 | 14,018 | 540 bp | − | 44.8% |
| tRNA-Glu | Transfer RNA | 14,022 | 14,089 | 68 bp | − | – |
| CYTB | Protein-coding gene | 14,091 | 15,244 | 1,154 bp | + | 43.7% |
| tRNA-Thr | Transfer RNA | 15,246 | 15,313 | 68 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,735 | 15,799 | 65 bp | − | – |
| D-loop | Control region | 15,800 | 16,969 | 1,170 bp | – | 40.2% |