Bolbometopon muricatum
Green humphead parrotfish
GC content
43.61%
Whole genome
Non-coding
1,201 bp
D-loop 1,026 bp
Where Green humphead parrotfish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Green humphead parrotfish has the 370th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,788 bp
- GC skew (G − C) / (G + C)
- −0.282
- AT skew (A − T) / (A + T)
- +0.035
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,788 bp
Protein-coding11,408 bp
12S rRNA945 bp
16S rRNA1,681 bp
All tRNA1,553 bp
D-loop1,026 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 972 bp | 47.22% | −0.333 | −0.064 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,047 bp | 46.04% | −0.485 | +0.019 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 43.78% | −0.216 | −0.110 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 40.67% | −0.260 | +0.015 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 40.48% | −0.559 | +0.060 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 43.57% | −0.430 | −0.088 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.48% | −0.244 | −0.037 | |||||
| ND3NADH dehydrogenase subunit 3 | 352 bp | 43.18% | −0.355 | −0.210 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 44.78% | −0.399 | −0.085 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 44.90% | −0.403 | −0.007 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 42.52% | −0.394 | −0.001 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 43.49% | −0.383 | +0.403 | |||||
| CYTBCytochrome b | 1,141 bp | 43.03% | −0.251 | −0.117 | |||||
| 12S rRNA12S ribosomal RNA | 945 bp | 47.30% | −0.092 | +0.217 | |||||
| 16S rRNA16S ribosomal RNA | 1,681 bp | 44.44% | −0.092 | +0.242 | |||||
| D-loopControl region (D-loop) | 1,026 bp | 33.43% | −0.329 | +0.095 |
Codon usage
Counts per codon, darker is more frequent3,808 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU124
UUC115
Leu L16.8%
UUA98
UUG24
CUU173
CUC137
CUA177
CUG32
Ile I7.2%
AUU151
AUC125
Met M4.1%
AUA98
AUG57
Val V6.0%
GUU79
GUC54
GUA82
GUG15
Ser S6.7%
UCU56
UCC69
UCA65
UCG10
AGU15
AGC39
Pro P5.9%
CCU70
CCC80
CCA69
CCG4
Thr T7.5%
ACU66
ACC108
ACA110
ACG3
Ala A9.2%
GCU91
GCC108
GCA137
GCG13
Tyr Y3.0%
UAU47
UAC68
His H2.9%
CAU43
CAC67
Gln Q2.5%
CAA88
CAG8
Asn N3.1%
AAU37
AAC82
Lys K2.0%
AAA71
AAG7
Asp D2.0%
GAU25
GAC51
Glu E2.5%
GAA84
GAG12
Cys C0.8%
UGU13
UGC18
Trp W3.1%
UGA102
UGG15
Arg R1.9%
CGU16
CGC7
CGA46
CGG5
Gly G6.1%
GGU23
GGC86
GGA93
GGG32
Stop 0.2%
UAA6
UAG2
AGA0
AGG0
Genome map
38 annotated features in NC_033901.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (43.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,013 | 945 bp | + | 47.3% |
| tRNA-Val | Transfer RNA | 1,014 | 1,085 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,087 | 2,767 | 1,681 bp | + | 44.4% |
| tRNA-Leu (UUR) | Transfer RNA | 2,768 | 2,841 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,845 | 3,816 | 972 bp | + | 47.2% |
| tRNA-Ile | Transfer RNA | 3,819 | 3,888 | 70 bp | + | – |
| tRNA-Met | Transfer RNA | 3,899 | 3,968 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,975 | 4,045 | 71 bp | − | – |
| ND2 | Protein-coding gene | 4,112 | 5,158 | 1,047 bp | + | 46.0% |
| tRNA-Trp | Transfer RNA | 5,168 | 5,237 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,240 | 5,308 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,312 | 5,384 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,425 | 5,491 | 67 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,492 | 5,562 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,564 | 7,114 | 1,551 bp | + | 43.8% |
| tRNA-Ser (UCN) | Transfer RNA | 7,115 | 7,185 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,189 | 7,261 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,269 | 7,959 | 691 bp | + | 40.7% |
| tRNA-Lys | Transfer RNA | 7,960 | 8,033 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 8,035 | 8,202 | 168 bp | + | 40.5% |
| ATP6 | Protein-coding gene | 8,193 | 8,876 | 684 bp | + | 43.6% |
| COX3 | Protein-coding gene | 8,876 | 9,660 | 785 bp | + | 45.5% |
| tRNA-Gly | Transfer RNA | 9,661 | 9,731 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,733 | 10,084 | 352 bp | + | 43.2% |
| tRNA-Arg | Transfer RNA | 10,085 | 10,153 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,154 | 10,450 | 297 bp | + | 44.8% |
| ND4 | Protein-coding gene | 10,444 | 11,824 | 1,381 bp | + | 44.9% |
| tRNA-His | Transfer RNA | 11,825 | 11,893 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,895 | 11,963 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,977 | 12,048 | 72 bp | + | – |
| ND5 | Protein-coding gene | 12,049 | 13,887 | 1,839 bp | + | 42.5% |
| ND6 | Protein-coding gene | 13,884 | 14,405 | 522 bp | − | 43.5% |
| tRNA-Glu | Transfer RNA | 14,407 | 14,474 | 68 bp | − | – |
| CYTB | Protein-coding gene | 14,480 | 15,620 | 1,141 bp | + | 43.0% |
| tRNA-Thr | Transfer RNA | 15,621 | 15,692 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,693 | 15,762 | 70 bp | − | – |
| D-loop | Control region | 15,763 | 16,788 | 1,026 bp | – | 33.4% |