Bombus terrestris
Buff tailed bumblebee
GC content
14.10%
Whole genome
Non-coding
2,676 bp
Including the D-loop
Where Buff tailed bumblebee sits among 2,335 species
Whole-genome GC content against maximum lifespan. Buff tailed bumblebee has the 2,333rd longest lifespan of them.
- This species
- All other species
Base composition
Whole genome17,232 bp
- GC skew (G − C) / (G + C)
- −0.329
- AT skew (A − T) / (A + T)
- +0.007
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, small sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,232 bp
Protein-coding10,988 bp
12S rRNA747 bp
16S rRNA1,363 bp
All tRNA1,482 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 933 bp | 15.66% | −0.386 | +0.191 | |||||
| ND2NADH dehydrogenase subunit 2 | 987 bp | 11.96% | −0.508 | −0.121 | |||||
| COX1Cytochrome c oxidase subunit I | 1,560 bp | 23.33% | −0.093 | −0.069 | |||||
| COX2Cytochrome c oxidase subunit II | 679 bp | 18.85% | −0.188 | −0.064 | |||||
| ATP8ATP synthase F0 subunit 8 | 150 bp | 8.67% | +0.077 | −0.007 | |||||
| ATP6ATP synthase F0 subunit 6 | 678 bp | 15.49% | −0.390 | −0.086 | |||||
| COX3Cytochrome c oxidase subunit III | 783 bp | 17.24% | −0.259 | −0.136 | |||||
| ND3NADH dehydrogenase subunit 3 | 360 bp | 12.22% | −0.455 | −0.120 | |||||
| ND4LNADH dehydrogenase subunit 4L | 267 bp | 12.73% | −0.647 | +0.185 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,300 bp | 14.69% | −0.456 | +0.151 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,641 bp | 13.96% | −0.371 | +0.145 | |||||
| ND6NADH dehydrogenase subunit 6 | 540 bp | 7.41% | −0.600 | −0.004 | |||||
| CYTBCytochrome b | 1,143 bp | 18.37% | −0.229 | −0.078 | |||||
| 12S rRNA12S ribosomal RNA | 747 bp | 14.57% | −0.392 | −0.013 | |||||
| 16S rRNA16S ribosomal RNA | 1,363 bp | 15.04% | −0.366 | +0.012 |
Codon usage
Counts per codon, darker is more frequent3,659 codons in all protein-coding genes. Grouped with the Invertebrate mitochondrial code (NCBI table 5).
Phe F10.9%
UUU362
UUC37
Leu L15.0%
UUA479
UUG28
CUU26
CUC0
CUA15
CUG0
Ile I13.4%
AUU463
AUC28
Met M10.2%
AUA359
AUG14
Val V3.0%
GUU48
GUC1
GUA58
GUG2
Ser S8.8%
UCU80
UCC4
UCA138
UCG2
AGU19
AGC0
AGA73
AGG7
Pro P2.8%
CCU48
CCC1
CCA51
CCG1
Thr T3.0%
ACU47
ACC8
ACA55
ACG0
Ala A1.3%
GCU21
GCC3
GCA23
GCG1
Tyr Y6.0%
UAU207
UAC13
His H1.6%
CAU49
CAC10
Gln Q1.2%
CAA40
CAG3
Asn N7.4%
AAU250
AAC20
Lys K4.5%
AAA155
AAG8
Asp D1.6%
GAU54
GAC3
Glu E2.0%
GAA66
GAG6
Cys C0.7%
UGU26
UGC0
Trp W2.0%
UGA72
UGG1
Arg R1.0%
CGU8
CGC0
CGA28
CGG1
Gly G3.5%
GGU41
GGC2
GGA77
GGG7
Stop 0.3%
UAA9
UAG1
Genome map
37 annotated features in NC_045179.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (14.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Met | Transfer RNA | 220 | 287 | 68 bp | + | – |
| tRNA-Ala | Transfer RNA | 1,265 | 1,333 | 69 bp | + | – |
| tRNA-Ile | Transfer RNA | 1,417 | 1,480 | 64 bp | + | – |
| ND2 | Protein-coding gene | 1,685 | 2,671 | 987 bp | + | 12.0% |
| tRNA-Cys | Transfer RNA | 2,661 | 2,726 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 2,788 | 2,854 | 67 bp | − | – |
| tRNA-Trp | Transfer RNA | 2,871 | 2,942 | 72 bp | + | – |
| COX1 | Protein-coding gene | 2,943 | 4,502 | 1,560 bp | + | 23.3% |
| tRNA-Leu | Transfer RNA | 4,625 | 4,692 | 68 bp | + | – |
| COX2 | Protein-coding gene | 4,761 | 5,439 | 679 bp | + | 18.9% |
| tRNA-Asp | Transfer RNA | 5,440 | 5,509 | 70 bp | + | – |
| tRNA-Lys | Transfer RNA | 5,512 | 5,580 | 69 bp | + | – |
| ATP8 | Protein-coding gene | 5,590 | 5,739 | 150 bp | + | 8.7% |
| ATP6 | Protein-coding gene | 5,721 | 6,398 | 678 bp | + | 15.5% |
| COX3 | Protein-coding gene | 6,399 | 7,181 | 783 bp | + | 17.2% |
| tRNA-Gly | Transfer RNA | 7,217 | 7,280 | 64 bp | + | – |
| ND3 | Protein-coding gene | 7,273 | 7,632 | 360 bp | + | 12.2% |
| tRNA-Arg | Transfer RNA | 7,661 | 7,739 | 79 bp | − | – |
| tRNA-Asn | Transfer RNA | 7,763 | 7,829 | 67 bp | + | – |
| tRNA-Glu | Transfer RNA | 7,838 | 7,911 | 74 bp | + | – |
| tRNA-Ser | Transfer RNA | 7,912 | 7,968 | 57 bp | + | – |
| tRNA-Phe | Transfer RNA | 8,128 | 8,193 | 66 bp | − | – |
| ND5 | Protein-coding gene | 8,282 | 9,922 | 1,641 bp | − | 14.0% |
| tRNA-His | Transfer RNA | 9,935 | 9,996 | 62 bp | − | – |
| ND4 | Protein-coding gene | 9,996 | 11,295 | 1,300 bp | − | 14.7% |
| ND4L | Protein-coding gene | 11,295 | 11,561 | 267 bp | − | 12.7% |
| tRNA-Pro | Transfer RNA | 11,706 | 11,771 | 66 bp | − | – |
| tRNA-Thr | Transfer RNA | 11,786 | 11,853 | 68 bp | + | – |
| ND6 | Protein-coding gene | 11,872 | 12,411 | 540 bp | + | 7.4% |
| CYTB | Protein-coding gene | 12,399 | 13,541 | 1,143 bp | + | 18.4% |
| tRNA-Ser | Transfer RNA | 13,540 | 13,606 | 67 bp | + | – |
| ND1 | Protein-coding gene | 13,854 | 14,786 | 933 bp | − | 15.7% |
| tRNA-Leu | Transfer RNA | 14,785 | 14,848 | 64 bp | − | – |
| 16S rRNA | Ribosomal RNA | 14,849 | 16,211 | 1,363 bp | − | 15.0% |
| tRNA-Val | Transfer RNA | 16,212 | 16,278 | 67 bp | − | – |
| 12S rRNA | Ribosomal RNA | 16,279 | 17,025 | 747 bp | − | 14.6% |
| tRNA-Gln | Transfer RNA | 17,027 | 17,094 | 68 bp | − | – |