Caranx ignobilis
Giant trevally
GC content
45.35%
Whole genome
Non-coding
950 bp
D-loop 883 bp
Where Giant trevally sits among 2,335 species
Whole-genome GC content against maximum lifespan. Giant trevally has the 1,521st longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,588 bp
- GC skew (G − C) / (G + C)
- −0.292
- AT skew (A − T) / (A + T)
- +0.055
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,588 bp
Protein-coding11,406 bp
12S rRNA952 bp
16S rRNA1,724 bp
All tRNA1,556 bp
D-loop883 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.80% | −0.386 | +0.002 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 47.27% | −0.502 | +0.074 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 44.87% | −0.181 | −0.092 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 41.82% | −0.273 | +0.055 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 48.81% | −0.488 | +0.163 | |||||
| ATP6ATP synthase F0 subunit 6 | 678 bp | 42.77% | −0.428 | −0.072 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 47.26% | −0.283 | −0.019 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 47.85% | −0.425 | −0.088 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.17% | −0.383 | −0.095 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 46.13% | −0.375 | −0.005 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 43.77% | −0.404 | +0.043 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 44.83% | −0.436 | +0.479 | |||||
| CYTBCytochrome b | 1,141 bp | 46.28% | −0.364 | −0.070 | |||||
| 12S rRNA12S ribosomal RNA | 952 bp | 48.74% | −0.086 | +0.176 | |||||
| 16S rRNA16S ribosomal RNA | 1,724 bp | 45.59% | −0.115 | +0.209 | |||||
| D-loopControl region (D-loop) | 883 bp | 37.71% | −0.279 | +0.080 |
Codon usage
Counts per codon, darker is more frequent3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU92
UUC144
Leu L17.0%
UUA82
UUG18
CUU157
CUC160
CUA201
CUG29
Ile I7.3%
AUU141
AUC138
Met M4.1%
AUA93
AUG64
Val V5.7%
GUU59
GUC61
GUA78
GUG18
Ser S6.2%
UCU38
UCC71
UCA67
UCG9
AGU17
AGC34
Pro P5.9%
CCU56
CCC87
CCA71
CCG9
Thr T7.9%
ACU55
ACC114
ACA116
ACG16
Ala A9.0%
GCU68
GCC140
GCA114
GCG20
Tyr Y3.0%
UAU50
UAC65
His H2.8%
CAU29
CAC77
Gln Q2.6%
CAA91
CAG8
Asn N3.3%
AAU42
AAC83
Lys K1.9%
AAA66
AAG8
Asp D2.0%
GAU28
GAC50
Glu E2.6%
GAA83
GAG15
Cys C0.7%
UGU6
UGC20
Trp W3.2%
UGA109
UGG12
Arg R2.0%
CGU10
CGC20
CGA41
CGG7
Gly G6.3%
GGU32
GGC78
GGA95
GGG36
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_022932.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,020 | 952 bp | + | 48.7% |
| tRNA-Val | Transfer RNA | 1,021 | 1,092 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,093 | 2,816 | 1,724 bp | + | 45.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,817 | 2,891 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,892 | 3,866 | 975 bp | + | 47.8% |
| tRNA-Ile | Transfer RNA | 3,873 | 3,942 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,943 | 4,013 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,013 | 4,083 | 71 bp | + | – |
| ND2 | Protein-coding gene | 4,084 | 5,128 | 1,045 bp | + | 47.3% |
| tRNA-Trp | Transfer RNA | 5,129 | 5,199 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,201 | 5,269 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,272 | 5,344 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,382 | 5,449 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,450 | 5,519 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,521 | 7,071 | 1,551 bp | + | 44.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,072 | 7,142 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,146 | 7,216 | 71 bp | + | – |
| COX2 | Protein-coding gene | 7,223 | 7,913 | 691 bp | + | 41.8% |
| tRNA-Lys | Transfer RNA | 7,914 | 7,988 | 75 bp | + | – |
| ATP8 | Protein-coding gene | 7,990 | 8,157 | 168 bp | + | 48.8% |
| ATP6 | Protein-coding gene | 8,154 | 8,831 | 678 bp | + | 42.8% |
| COX3 | Protein-coding gene | 8,831 | 9,615 | 785 bp | + | 47.3% |
| tRNA-Gly | Transfer RNA | 9,616 | 9,685 | 70 bp | + | – |
| ND3 | Protein-coding gene | 9,686 | 10,034 | 349 bp | + | 47.9% |
| tRNA-Arg | Transfer RNA | 10,035 | 10,103 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,105 | 10,401 | 297 bp | + | 50.2% |
| ND4 | Protein-coding gene | 10,395 | 11,775 | 1,381 bp | + | 46.1% |
| tRNA-His | Transfer RNA | 11,776 | 11,846 | 71 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,847 | 11,914 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,920 | 11,992 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,993 | 13,831 | 1,839 bp | + | 43.8% |
| ND6 | Protein-coding gene | 13,828 | 14,349 | 522 bp | − | 44.8% |
| tRNA-Glu | Transfer RNA | 14,350 | 14,418 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,423 | 15,563 | 1,141 bp | + | 46.3% |
| tRNA-Thr | Transfer RNA | 15,564 | 15,635 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,635 | 15,705 | 71 bp | − | – |
| D-loop | Control region | 15,706 | 16,588 | 883 bp | – | 37.7% |