MitoAge

Carollia perspicillata

Seba's short-tailed bat

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Maximum lifespan
17 yr
AnAge record
mtDNA size
16,711 bp
RefSeq NC_022422.1
GC content
41.45%
Whole genome
Non-coding
1,323 bp
D-loop 1,275 bp

Where Seba's short-tailed bat sits among 2,335 species

Whole-genome GC content against maximum lifespan. Seba's short-tailed bat has the 1,099th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Seba's short-tailed bat
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,711 bp
GC skew (G − C) / (G + C)
−0.338
AT skew (A − T) / (A + T)
+0.075

Life history

Maximum lifespan
17 years
Adult weight
15 g
Birth weight
5 g
Basal metabolic rate
0.24 W
Body temperature
36.4 °C
Female sexual maturity
258 days
Male sexual maturity
258 days
Gestation or incubation
95 days
Litter or clutch size
1
Litters per year
2
Postnatal growth rate
0.0347 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02340)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
high, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,711 bp
Protein-coding11,344 bp
12S rRNA970 bp
16S rRNA1,565 bp
All tRNA1,517 bp
D-loop1,275 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp31.5%26.0%11.7%30.8%42.53%−0.450+0.095
ND2NADH dehydrogenase subunit 21,044 bp35.2%24.8%7.7%32.4%40.04%−0.617+0.173
COX1Cytochrome c oxidase subunit I1,545 bp27.0%31.5%16.2%25.3%41.49%−0.220−0.077
COX2Cytochrome c oxidase subunit II684 bp30.7%28.1%14.0%27.2%41.23%−0.319+0.045
ATP8ATP synthase F0 subunit 8204 bp36.8%29.4%7.8%26.0%33.82%−0.536+0.111
ATP6ATP synthase F0 subunit 6681 bp29.7%31.3%11.7%27.3%39.06%−0.399−0.027
COX3Cytochrome c oxidase subunit III785 bp27.5%28.0%15.3%29.2%44.46%−0.312−0.009
ND3NADH dehydrogenase subunit 3348 bp29.3%26.7%14.4%29.6%43.97%−0.346+0.046
ND4LNADH dehydrogenase subunit 4L297 bp31.3%29.6%11.1%27.9%39.06%−0.431+0.028
ND4NADH dehydrogenase subunit 41,378 bp30.3%29.2%10.6%29.8%40.42%−0.476+0.018
ND5NADH dehydrogenase subunit 51,821 bp31.3%27.2%10.5%31.0%41.46%−0.494+0.069
ND6NADH dehydrogenase subunit 6528 bp42.0%18.9%6.6%32.4%39.02%−0.660+0.379
CYTBCytochrome b1,140 bp28.2%28.7%14.0%29.0%43.07%−0.348−0.008
12S rRNA12S ribosomal RNA970 bp33.9%22.8%18.4%24.9%43.30%−0.152+0.196
16S rRNA16S ribosomal RNA1,565 bp35.2%24.2%17.8%22.7%40.58%−0.121+0.185
D-loopControl region (D-loop)1,275 bp28.3%26.3%16.9%28.5%45.41%−0.254+0.037

Codon usage

Counts per codon, darker is more frequent

3,803 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU92
UUC136
Leu L16.3%
UUA92
UUG15
CUU84
CUC105
CUA288
CUG37
Ile I8.2%
AUU154
AUC156
Met M6.0%
AUA189
AUG40
Val V5.5%
GUU47
GUC51
GUA95
GUG18
Ser S7.5%
UCU62
UCC84
UCA77
UCG3
AGU16
AGC42
Pro P5.3%
CCU54
CCC75
CCA70
CCG3
Thr T9.0%
ACU73
ACC115
ACA140
ACG14
Ala A6.4%
GCU58
GCC89
GCA92
GCG4
Tyr Y3.5%
UAU60
UAC73
His H2.5%
CAU39
CAC57
Gln Q2.3%
CAA78
CAG9
Asn N3.8%
AAU54
AAC91
Lys K2.4%
AAA80
AAG12
Asp D1.7%
GAU24
GAC41
Glu E2.4%
GAA77
GAG15
Cys C0.6%
UGU4
UGC20
Trp W2.7%
UGA94
UGG10
Arg R1.8%
CGU15
CGC17
CGA33
CGG2
Gly G5.7%
GGU40
GGC74
GGA79
GGG24
Stop 0.3%
UAA10
UAG0
AGA1
AGG0

Genome map

38 annotated features in NC_022422.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (41.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA711,040970 bp+43.3%
tRNA-ValTransfer RNA1,0411,10868 bp+–
16S rRNARibosomal RNA1,1092,6731,565 bp+40.6%
tRNA-Leu (UUR)Transfer RNA2,6742,74976 bp+–
ND1Protein-coding gene2,7523,708957 bp+42.5%
tRNA-IleTransfer RNA3,7083,77669 bp+–
tRNA-GlnTransfer RNA3,7743,84673 bp−–
tRNA-MetTransfer RNA3,8463,91469 bp+–
ND2Protein-coding gene3,9154,9581,044 bp+40.0%
tRNA-TrpTransfer RNA4,9585,02568 bp+–
tRNA-AlaTransfer RNA5,0315,09969 bp−–
tRNA-AsnTransfer RNA5,1005,17374 bp−–
tRNA-CysTransfer RNA5,2065,27368 bp−–
tRNA-TyrTransfer RNA5,2745,33865 bp−–
COX1Protein-coding gene5,3406,8841,545 bp+41.5%
tRNA-Ser (UCN)Transfer RNA6,8806,95273 bp−–
tRNA-AspTransfer RNA6,9547,02269 bp+–
COX2Protein-coding gene7,0237,706684 bp+41.2%
tRNA-LysTransfer RNA7,7107,77869 bp+–
ATP8Protein-coding gene7,7807,983204 bp+33.8%
ATP6Protein-coding gene7,9418,621681 bp+39.1%
COX3Protein-coding gene8,6219,405785 bp+44.5%
tRNA-GlyTransfer RNA9,4059,47369 bp+–
ND3Protein-coding gene9,4749,821348 bp+44.0%
tRNA-ArgTransfer RNA9,8239,88866 bp+–
ND4LProtein-coding gene9,89010,186297 bp+39.1%
ND4Protein-coding gene10,18011,5571,378 bp+40.4%
tRNA-HisTransfer RNA11,55811,62669 bp+–
tRNA-Ser (AGY)Transfer RNA11,62711,68660 bp+–
tRNA-Leu (CUN)Transfer RNA11,68811,75770 bp+–
ND5Protein-coding gene11,75813,5781,821 bp+41.5%
ND6Protein-coding gene13,56214,089528 bp−39.0%
tRNA-GluTransfer RNA14,09014,16172 bp−–
CYTBProtein-coding gene14,16215,3011,140 bp+43.1%
tRNA-ThrTransfer RNA15,30215,37069 bp+–
tRNA-ProTransfer RNA15,37015,43667 bp−–
D-loopControl region15,43716,7111,275 bp–45.4%

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