MitoAge

Cebus albifrons

White-fronted capuchin

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Maximum lifespan
40.4 yr
AnAge record
mtDNA size
16,554 bp
RefSeq NC_002763.1
GC content
39.08%
Whole genome
Non-coding
1,201 bp
D-loop 1,106 bp

Where White-fronted capuchin sits among 2,335 species

Whole-genome GC content against maximum lifespan. White-fronted capuchin has the 247th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %White-fronted capuchin
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,554 bp
GC skew (G − C) / (G + C)
−0.347
AT skew (A − T) / (A + T)
+0.079

Life history

Maximum lifespan
40.4 years
Adult weight
2.5 kg
Birth weight
233 g
Female sexual maturity
3.6 years
Male sexual maturity
3.6 years
Gestation or incubation
158 days
Litter or clutch size
1
Litters per year
0.7

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02703)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,554 bp
Protein-coding11,342 bp
12S rRNA958 bp
16S rRNA1,565 bp
All tRNA1,492 bp
D-loop1,106 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp32.5%28.2%10.7%28.6%39.29%−0.457+0.071
ND2NADH dehydrogenase subunit 21,041 bp35.3%27.6%7.9%29.3%37.18%−0.576+0.122
COX1Cytochrome c oxidase subunit I1,546 bp27.6%31.8%16.0%24.6%40.62%−0.210−0.070
COX2Cytochrome c oxidase subunit II688 bp32.3%29.1%13.2%25.4%38.66%−0.316+0.052
ATP8ATP synthase F0 subunit 8201 bp41.3%28.9%7.0%22.9%29.85%−0.533+0.177
ATP6ATP synthase F0 subunit 6681 bp32.3%29.7%9.0%29.1%38.03%−0.529+0.043
COX3Cytochrome c oxidase subunit III784 bp28.7%28.3%14.8%28.2%42.99%−0.312+0.007
ND3NADH dehydrogenase subunit 3346 bp33.2%29.2%10.7%26.9%37.57%−0.431+0.065
ND4LNADH dehydrogenase subunit 4L297 bp32.3%33.3%10.4%23.9%34.34%−0.392−0.015
ND4NADH dehydrogenase subunit 41,375 bp33.5%27.9%9.7%28.9%38.62%−0.495+0.092
ND5NADH dehydrogenase subunit 51,806 bp32.8%30.1%9.7%27.4%37.04%−0.477+0.043
ND6NADH dehydrogenase subunit 6534 bp39.9%20.6%9.4%30.1%39.51%−0.526+0.319
CYTBCytochrome b1,137 bp30.2%30.1%11.1%28.7%39.75%−0.442+0.001
12S rRNA12S ribosomal RNA958 bp34.0%23.6%18.3%24.1%42.38%−0.138+0.181
16S rRNA16S ribosomal RNA1,565 bp36.0%24.3%16.5%23.1%39.68%−0.166+0.195
D-loopControl region (D-loop)1,106 bp30.0%27.4%16.0%26.6%42.59%−0.248+0.046

Codon usage

Counts per codon, darker is more frequent

3,796 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.9%
UUU125
UUC100
Leu L16.3%
UUA129
UUG15
CUU106
CUC76
CUA269
CUG25
Ile I8.4%
AUU207
AUC112
Met M6.6%
AUA215
AUG36
Val V3.8%
GUU36
GUC22
GUA64
GUG21
Ser S7.2%
UCU44
UCC72
UCA98
UCG6
AGU22
AGC33
Pro P5.4%
CCU47
CCC71
CCA83
CCG5
Thr T9.7%
ACU70
ACC123
ACA167
ACG8
Ala A6.4%
GCU52
GCC90
GCA92
GCG8
Tyr Y3.8%
UAU67
UAC79
His H2.5%
CAU41
CAC53
Gln Q2.6%
CAA94
CAG4
Asn N4.4%
AAU73
AAC95
Lys K2.4%
AAA85
AAG8
Asp D1.7%
GAU33
GAC31
Glu E2.3%
GAA69
GAG19
Cys C0.6%
UGU7
UGC15
Trp W2.7%
UGA89
UGG13
Arg R1.6%
CGU7
CGC19
CGA30
CGG3
Gly G5.4%
GGU46
GGC69
GGA69
GGG21
Stop 0.2%
UAA7
UAG1
AGA0
AGG0

Genome map

38 annotated features in NC_002763.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA711,028958 bp+42.4%
tRNA-ValTransfer RNA1,0291,08658 bp+–
16S rRNARibosomal RNA1,0872,6511,565 bp+39.7%
tRNA-Leu (UUR)Transfer RNA2,6522,72675 bp+–
ND1Protein-coding gene2,7293,685957 bp+39.3%
tRNA-IleTransfer RNA3,6853,75369 bp+–
tRNA-GlnTransfer RNA3,7513,82272 bp−–
tRNA-MetTransfer RNA3,8263,89368 bp+–
ND2Protein-coding gene3,8964,9361,041 bp+37.2%
tRNA-TrpTransfer RNA4,9355,00167 bp+–
tRNA-AlaTransfer RNA5,0105,07768 bp−–
tRNA-AsnTransfer RNA5,0795,15173 bp−–
tRNA-CysTransfer RNA5,1875,25367 bp−–
tRNA-TyrTransfer RNA5,2535,32068 bp−–
COX1Protein-coding gene5,3296,8741,546 bp+40.6%
tRNA-Ser (UCN)Transfer RNA6,8746,94269 bp−–
tRNA-AspTransfer RNA6,9467,01570 bp+–
COX2Protein-coding gene7,0167,703688 bp+38.7%
tRNA-LysTransfer RNA7,7047,76663 bp+–
ATP8Protein-coding gene7,7677,967201 bp+29.9%
ATP6Protein-coding gene7,9288,608681 bp+38.0%
COX3Protein-coding gene8,6339,416784 bp+43.0%
tRNA-GlyTransfer RNA9,4179,48367 bp+–
ND3Protein-coding gene9,4849,829346 bp+37.6%
tRNA-ArgTransfer RNA9,8309,89566 bp+–
ND4LProtein-coding gene9,89710,193297 bp+34.3%
ND4Protein-coding gene10,18711,5611,375 bp+38.6%
tRNA-HisTransfer RNA11,56211,63069 bp+–
tRNA-Ser (AGY)Transfer RNA11,63111,68959 bp+–
tRNA-Leu (CUN)Transfer RNA11,69011,76071 bp+–
ND5Protein-coding gene11,76313,5681,806 bp+37.0%
ND6Protein-coding gene13,56514,098534 bp−39.5%
tRNA-GluTransfer RNA14,09914,16769 bp−–
CYTBProtein-coding gene14,17215,3081,137 bp+39.8%
tRNA-ThrTransfer RNA15,31015,37970 bp+–
tRNA-ProTransfer RNA15,38115,44868 bp−–
D-loopControl region15,44916,5541,106 bp–42.6%

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