MitoAge

Sapajus apella

Brown capuchin

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Maximum lifespan
46 yr
AnAge record
mtDNA size
16,542 bp
RefSeq NC_064184.1
GC content
39.07%
Whole genome
Non-coding
1,190 bp
D-loop 1,096 bp

Where Brown capuchin sits among 2,335 species

Whole-genome GC content against maximum lifespan. Brown capuchin has the 188th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Brown capuchin
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,542 bp
GC skew (G − C) / (G + C)
−0.353
AT skew (A − T) / (A + T)
+0.083

Life history

Maximum lifespan
46 years
Adult weight
2.6 kg
Birth weight
239.7 g
Female sexual maturity
4.7 years
Gestation or incubation
158 days
Litter or clutch size
1.5
Litters per year
0.6

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02709)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
high, large sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Renamed in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)
Earlier name
Cebus apella

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,542 bp
Protein-coding11,349 bp
12S rRNA960 bp
16S rRNA1,554 bp
All tRNA1,501 bp
D-loop1,096 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp32.3%27.9%10.7%29.2%39.90%−0.465+0.073
ND2NADH dehydrogenase subunit 21,039 bp36.4%27.4%6.8%29.4%36.19%−0.622+0.140
COX1Cytochrome c oxidase subunit I1,557 bp28.2%32.3%16.1%23.4%39.50%−0.184−0.068
COX2Cytochrome c oxidase subunit II688 bp32.8%28.5%13.1%25.6%38.66%−0.323+0.071
ATP8ATP synthase F0 subunit 8201 bp41.3%27.9%7.0%23.9%30.85%−0.548+0.194
ATP6ATP synthase F0 subunit 6681 bp32.3%29.2%9.1%29.4%38.47%−0.527+0.050
COX3Cytochrome c oxidase subunit III784 bp27.9%28.4%15.6%28.1%43.62%−0.287−0.009
ND3NADH dehydrogenase subunit 3346 bp33.8%29.2%10.1%26.9%36.99%−0.453+0.073
ND4LNADH dehydrogenase subunit 4L297 bp32.3%36.4%10.4%20.9%31.31%−0.333−0.059
ND4NADH dehydrogenase subunit 41,375 bp33.6%28.3%9.7%28.4%38.11%−0.489+0.086
ND5NADH dehydrogenase subunit 51,806 bp32.8%29.1%9.7%28.3%38.04%−0.491+0.060
ND6NADH dehydrogenase subunit 6534 bp41.4%21.5%8.1%29.0%37.08%−0.566+0.315
CYTBCytochrome b1,137 bp29.9%28.6%11.3%30.2%41.51%−0.453+0.023
12S rRNA12S ribosomal RNA960 bp34.0%22.5%18.8%24.8%43.54%−0.139+0.203
16S rRNA16S ribosomal RNA1,554 bp36.8%24.5%15.9%22.8%38.74%−0.179+0.202
D-loopControl region (D-loop)1,096 bp29.6%27.8%16.1%26.6%42.61%−0.246+0.030

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.9%
UUU124
UUC100
Leu L16.5%
UUA124
UUG16
CUU111
CUC68
CUA287
CUG19
Ile I8.2%
AUU193
AUC119
Met M6.7%
AUA216
AUG38
Val V3.9%
GUU42
GUC23
GUA69
GUG16
Ser S7.1%
UCU40
UCC74
UCA98
UCG6
AGU15
AGC35
Pro P5.2%
CCU41
CCC72
CCA81
CCG5
Thr T10.0%
ACU83
ACC114
ACA172
ACG9
Ala A6.2%
GCU55
GCC89
GCA89
GCG3
Tyr Y3.8%
UAU70
UAC76
His H2.5%
CAU38
CAC56
Gln Q2.6%
CAA90
CAG7
Asn N4.5%
AAU70
AAC101
Lys K2.4%
AAA86
AAG7
Asp D1.8%
GAU30
GAC37
Glu E2.3%
GAA69
GAG20
Cys C0.6%
UGU7
UGC16
Trp W2.7%
UGA91
UGG11
Arg R1.6%
CGU4
CGC23
CGA28
CGG5
Gly G5.3%
GGU45
GGC66
GGA69
GGG23
Stop 0.2%
UAA5
UAG1
AGA0
AGG1

Genome map

38 annotated features in NC_064184.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (39.1%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA17070 bp+–
12S rRNARibosomal RNA711,030960 bp+43.5%
tRNA-ValTransfer RNA1,0311,09868 bp+–
16S rRNARibosomal RNA1,0992,6521,554 bp+38.7%
tRNA-Leu (UUR)Transfer RNA2,6532,72775 bp+–
ND1Protein-coding gene2,7303,684955 bp+39.9%
tRNA-IleTransfer RNA3,6853,75470 bp+–
tRNA-GlnTransfer RNA3,7523,82372 bp−–
tRNA-MetTransfer RNA3,8273,89468 bp+–
ND2Protein-coding gene3,8974,9351,039 bp+36.2%
tRNA-TrpTransfer RNA4,9365,00267 bp+–
tRNA-AlaTransfer RNA5,0115,07868 bp−–
tRNA-AsnTransfer RNA5,0805,15273 bp−–
tRNA-CysTransfer RNA5,1865,25267 bp−–
tRNA-TyrTransfer RNA5,2535,31765 bp−–
COX1Protein-coding gene5,3266,8821,557 bp+39.5%
tRNA-Ser (UCN)Transfer RNA6,8716,93868 bp−–
tRNA-AspTransfer RNA6,9427,00968 bp+–
COX2Protein-coding gene7,0107,697688 bp+38.7%
tRNA-LysTransfer RNA7,6987,76265 bp+–
ATP8Protein-coding gene7,7637,963201 bp+30.9%
ATP6Protein-coding gene7,9248,604681 bp+38.5%
COX3Protein-coding gene8,6299,412784 bp+43.6%
tRNA-GlyTransfer RNA9,4139,47967 bp+–
ND3Protein-coding gene9,4809,825346 bp+37.0%
tRNA-ArgTransfer RNA9,8269,89166 bp+–
ND4LProtein-coding gene9,89310,189297 bp+31.3%
ND4Protein-coding gene10,18311,5571,375 bp+38.1%
tRNA-HisTransfer RNA11,55811,62669 bp+–
tRNA-Ser (AGY)Transfer RNA11,62711,68660 bp+–
tRNA-Leu (CUN)Transfer RNA11,68711,75771 bp+–
ND5Protein-coding gene11,76013,5651,806 bp+38.0%
ND6Protein-coding gene13,56214,095534 bp−37.1%
tRNA-GluTransfer RNA14,09614,16469 bp−–
CYTBProtein-coding gene14,16915,3051,137 bp+41.5%
tRNA-ThrTransfer RNA15,30815,37770 bp+–
tRNA-ProTransfer RNA15,37915,44668 bp−–
D-loopControl region15,44716,5421,096 bp–42.6%

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