Centrolabrus exoletus
Rock cook
GC content
50.49%
Whole genome
Non-coding
894 bp
D-loop 831 bp
Where Rock cook sits among 2,335 species
Whole-genome GC content against maximum lifespan. Rock cook has the 1,924th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,494 bp
- GC skew (G − C) / (G + C)
- −0.257
- AT skew (A − T) / (A + T)
- −0.003
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,494 bp
Protein-coding11,414 bp
12S rRNA946 bp
16S rRNA1,688 bp
All tRNA1,552 bp
D-loop831 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 980 bp | 53.57% | −0.307 | −0.165 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 55.31% | −0.436 | −0.049 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 50.81% | −0.208 | −0.119 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.74% | −0.263 | +0.016 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 49.41% | −0.542 | +0.106 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 50.88% | −0.385 | −0.054 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 51.85% | −0.278 | −0.101 | |||||
| ND3NADH dehydrogenase subunit 3 | 352 bp | 55.68% | −0.347 | −0.295 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 52.19% | −0.355 | −0.141 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 52.28% | −0.310 | −0.096 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 52.50% | −0.308 | −0.045 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 51.72% | −0.356 | +0.405 | |||||
| CYTBCytochrome b | 1,141 bp | 50.92% | −0.367 | −0.129 | |||||
| 12S rRNA12S ribosomal RNA | 946 bp | 49.58% | −0.058 | +0.170 | |||||
| 16S rRNA16S ribosomal RNA | 1,688 bp | 47.51% | −0.085 | +0.194 | |||||
| D-loopControl region (D-loop) | 831 bp | 39.16% | −0.175 | +0.046 |
Codon usage
Counts per codon, darker is more frequent3,808 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU95
UUC139
Leu L17.6%
UUA51
UUG30
CUU161
CUC253
CUA96
CUG78
Ile I6.1%
AUU110
AUC123
Met M3.8%
AUA55
AUG89
Val V6.3%
GUU53
GUC100
GUA45
GUG43
Ser S6.3%
UCU29
UCC85
UCA49
UCG18
AGU13
AGC46
Pro P5.7%
CCU37
CCC124
CCA40
CCG16
Thr T7.6%
ACU42
ACC128
ACA99
ACG21
Ala A10.1%
GCU57
GCC201
GCA105
GCG23
Tyr Y3.0%
UAU33
UAC82
His H2.8%
CAU16
CAC92
Gln Q2.5%
CAA68
CAG26
Asn N2.8%
AAU36
AAC71
Lys K2.0%
AAA55
AAG22
Asp D2.0%
GAU13
GAC64
Glu E2.4%
GAA47
GAG45
Cys C0.7%
UGU3
UGC23
Trp W3.2%
UGA84
UGG39
Arg R2.0%
CGU14
CGC18
CGA29
CGG14
Gly G6.7%
GGU27
GGC121
GGA44
GGG62
Stop 0.2%
UAA6
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_052764.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (50.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
Not drawn: D-loop 1,088–16,494, annotated over most of the record.
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,014 | 946 bp | + | 49.6% |
| tRNA-Val | Transfer RNA | 1,015 | 1,087 | 73 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,089 | 2,776 | 1,688 bp | + | 47.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,777 | 2,850 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,851 | 3,830 | 980 bp | + | 53.6% |
| tRNA-Ile | Transfer RNA | 3,831 | 3,900 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,902 | 3,972 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,972 | 4,040 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,041 | 5,085 | 1,045 bp | + | 55.3% |
| tRNA-Trp | Transfer RNA | 5,086 | 5,156 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,158 | 5,226 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,228 | 5,300 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,337 | 5,402 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,403 | 5,472 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,474 | 7,024 | 1,551 bp | + | 50.8% |
| tRNA-Ser (UCN) | Transfer RNA | 7,025 | 7,095 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,099 | 7,171 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,180 | 7,870 | 691 bp | + | 46.7% |
| tRNA-Lys | Transfer RNA | 7,871 | 7,944 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,946 | 8,113 | 168 bp | + | 49.4% |
| ATP6 | Protein-coding gene | 8,104 | 8,787 | 684 bp | + | 50.9% |
| COX3 | Protein-coding gene | 8,787 | 9,571 | 785 bp | + | 51.9% |
| tRNA-Gly | Transfer RNA | 9,572 | 9,642 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,644 | 9,995 | 352 bp | + | 55.7% |
| tRNA-Arg | Transfer RNA | 9,996 | 10,064 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,065 | 10,361 | 297 bp | + | 52.2% |
| ND4 | Protein-coding gene | 10,355 | 11,735 | 1,381 bp | + | 52.3% |
| tRNA-His | Transfer RNA | 11,736 | 11,804 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,805 | 11,873 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,878 | 11,950 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,954 | 13,792 | 1,839 bp | + | 52.5% |
| ND6 | Protein-coding gene | 13,789 | 14,310 | 522 bp | − | 51.7% |
| tRNA-Glu | Transfer RNA | 14,311 | 14,379 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,383 | 15,523 | 1,141 bp | + | 50.9% |
| tRNA-Thr | Transfer RNA | 15,524 | 15,595 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,595 | 15,664 | 70 bp | − | – |