Cephalopholis sexmaculata
Sixblotch hind
GC content
44.64%
Whole genome
Non-coding
951 bp
D-loop 877 bp
Where Sixblotch hind sits among 2,335 species
Whole-genome GC content against maximum lifespan. Sixblotch hind has the 1,766th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,589 bp
- GC skew (G − C) / (G + C)
- −0.280
- AT skew (A − T) / (A + T)
- +0.060
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,589 bp
Protein-coding11,407 bp
12S rRNA957 bp
16S rRNA1,710 bp
All tRNA1,564 bp
D-loop877 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 46.67% | −0.385 | −0.004 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 48.18% | −0.464 | +0.111 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 44.36% | −0.174 | −0.119 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.27% | −0.291 | +0.041 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 41.67% | −0.371 | +0.122 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 42.84% | −0.399 | −0.003 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.86% | −0.261 | −0.035 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 47.28% | −0.406 | −0.098 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 50.51% | −0.413 | −0.034 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 43.81% | −0.382 | +0.021 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 44.81% | −0.400 | +0.082 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 44.25% | −0.351 | +0.368 | |||||
| CYTBCytochrome b | 1,141 bp | 45.40% | −0.359 | −0.047 | |||||
| 12S rRNA12S ribosomal RNA | 957 bp | 47.65% | −0.105 | +0.178 | |||||
| 16S rRNA16S ribosomal RNA | 1,710 bp | 45.85% | −0.094 | +0.246 | |||||
| D-loopControl region (D-loop) | 877 bp | 34.44% | −0.199 | +0.037 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU81
UUC153
Leu L17.0%
UUA99
UUG12
CUU142
CUC135
CUA217
CUG42
Ile I7.1%
AUU151
AUC121
Met M4.3%
AUA110
AUG52
Val V5.8%
GUU57
GUC49
GUA95
GUG20
Ser S6.3%
UCU38
UCC75
UCA72
UCG5
AGU4
AGC45
Pro P5.7%
CCU46
CCC91
CCA71
CCG8
Thr T8.0%
ACU48
ACC107
ACA140
ACG11
Ala A9.2%
GCU74
GCC143
GCA123
GCG11
Tyr Y2.8%
UAU43
UAC65
His H2.9%
CAU33
CAC77
Gln Q2.7%
CAA89
CAG13
Asn N3.1%
AAU39
AAC79
Lys K2.0%
AAA72
AAG5
Asp D2.1%
GAU23
GAC57
Glu E2.4%
GAA81
GAG12
Cys C0.7%
UGU10
UGC18
Trp W3.1%
UGA100
UGG17
Arg R2.0%
CGU11
CGC12
CGA49
CGG6
Gly G6.3%
GGU43
GGC73
GGA81
GGG44
Stop 0.2%
UAA7
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_024100.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 71 | 1,027 | 957 bp | + | 47.7% |
| tRNA-Val | Transfer RNA | 1,028 | 1,098 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,100 | 2,809 | 1,710 bp | + | 45.9% |
| tRNA-Leu (UUR) | Transfer RNA | 2,810 | 2,884 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,885 | 3,859 | 975 bp | + | 46.7% |
| tRNA-Ile | Transfer RNA | 3,867 | 3,936 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,935 | 4,006 | 72 bp | − | – |
| tRNA-Met | Transfer RNA | 4,007 | 4,075 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,076 | 5,121 | 1,046 bp | + | 48.2% |
| tRNA-Trp | Transfer RNA | 5,122 | 5,193 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,195 | 5,263 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,264 | 5,336 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,376 | 5,443 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,444 | 5,514 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,516 | 7,066 | 1,551 bp | + | 44.4% |
| tRNA-Ser (UCN) | Transfer RNA | 7,067 | 7,137 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,141 | 7,213 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,222 | 7,912 | 691 bp | + | 43.3% |
| tRNA-Lys | Transfer RNA | 7,913 | 7,985 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,987 | 8,154 | 168 bp | + | 41.7% |
| ATP6 | Protein-coding gene | 8,145 | 8,828 | 684 bp | + | 42.8% |
| COX3 | Protein-coding gene | 8,828 | 9,612 | 785 bp | + | 45.9% |
| tRNA-Gly | Transfer RNA | 9,613 | 9,684 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,685 | 10,033 | 349 bp | + | 47.3% |
| tRNA-Arg | Transfer RNA | 10,034 | 10,102 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,103 | 10,399 | 297 bp | + | 50.5% |
| ND4 | Protein-coding gene | 10,393 | 11,773 | 1,381 bp | + | 43.8% |
| tRNA-His | Transfer RNA | 11,774 | 11,843 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,844 | 11,916 | 73 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,926 | 11,998 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,999 | 13,837 | 1,839 bp | + | 44.8% |
| ND6 | Protein-coding gene | 13,834 | 14,355 | 522 bp | − | 44.3% |
| tRNA-Glu | Transfer RNA | 14,356 | 14,424 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,429 | 15,569 | 1,141 bp | + | 45.4% |
| tRNA-Thr | Transfer RNA | 15,570 | 15,643 | 74 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,643 | 15,712 | 70 bp | − | – |
| D-loop | Control region | 15,713 | 16,589 | 877 bp | – | 34.4% |