Cephalopholis spiloparaea
Strawberry hind
GC content
44.71%
Whole genome
Non-coding
954 bp
D-loop 880 bp
Where Strawberry hind sits among 2,335 species
Whole-genome GC content against maximum lifespan. Strawberry hind has the 1,868th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,587 bp
- GC skew (G − C) / (G + C)
- −0.278
- AT skew (A − T) / (A + T)
- +0.057
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,587 bp
Protein-coding11,407 bp
12S rRNA954 bp
16S rRNA1,709 bp
All tRNA1,563 bp
D-loop880 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 47.18% | −0.396 | +0.010 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,046 bp | 47.71% | −0.483 | +0.104 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 45.39% | −0.205 | −0.091 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 42.11% | −0.265 | +0.050 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 41.07% | −0.333 | +0.051 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 42.11% | −0.403 | −0.015 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 43.95% | −0.264 | −0.050 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 45.85% | −0.325 | −0.122 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 48.15% | −0.343 | −0.117 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 44.75% | −0.392 | +0.035 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 45.30% | −0.409 | +0.078 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 45.59% | −0.387 | +0.331 | |||||
| CYTBCytochrome b | 1,141 bp | 44.61% | −0.340 | −0.044 | |||||
| 12S rRNA12S ribosomal RNA | 954 bp | 47.59% | −0.084 | +0.172 | |||||
| 16S rRNA16S ribosomal RNA | 1,709 bp | 46.05% | −0.098 | +0.245 | |||||
| D-loopControl region (D-loop) | 880 bp | 35.91% | −0.184 | +0.018 |
Codon usage
Counts per codon, darker is more frequent3,807 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.3%
UUU74
UUC165
Leu L16.8%
UUA78
UUG16
CUU144
CUC122
CUA237
CUG44
Ile I7.2%
AUU140
AUC135
Met M4.2%
AUA102
AUG57
Val V5.7%
GUU61
GUC44
GUA96
GUG17
Ser S6.3%
UCU40
UCC73
UCA67
UCG8
AGU6
AGC44
Pro P5.8%
CCU47
CCC82
CCA87
CCG3
Thr T8.2%
ACU57
ACC110
ACA134
ACG11
Ala A9.1%
GCU72
GCC139
GCA123
GCG13
Tyr Y2.9%
UAU38
UAC71
His H2.8%
CAU32
CAC75
Gln Q2.6%
CAA87
CAG11
Asn N3.1%
AAU43
AAC75
Lys K2.0%
AAA70
AAG7
Asp D2.2%
GAU31
GAC51
Glu E2.5%
GAA85
GAG11
Cys C0.7%
UGU9
UGC17
Trp W3.1%
UGA101
UGG17
Arg R2.0%
CGU11
CGC9
CGA49
CGG8
Gly G6.4%
GGU50
GGC72
GGA89
GGG33
Stop 0.2%
UAA6
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_065828.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 71 | 1,024 | 954 bp | + | 47.6% |
| tRNA-Val | Transfer RNA | 1,025 | 1,095 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,096 | 2,804 | 1,709 bp | + | 46.1% |
| tRNA-Leu (UUR) | Transfer RNA | 2,805 | 2,879 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,880 | 3,854 | 975 bp | + | 47.2% |
| tRNA-Ile | Transfer RNA | 3,860 | 3,929 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,929 | 3,999 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,000 | 4,068 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,069 | 5,114 | 1,046 bp | + | 47.7% |
| tRNA-Trp | Transfer RNA | 5,115 | 5,185 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,187 | 5,255 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,257 | 5,329 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,368 | 5,435 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,436 | 5,506 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,508 | 7,058 | 1,551 bp | + | 45.4% |
| tRNA-Ser (UCN) | Transfer RNA | 7,060 | 7,131 | 72 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,135 | 7,207 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,217 | 7,907 | 691 bp | + | 42.1% |
| tRNA-Lys | Transfer RNA | 7,908 | 7,980 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,982 | 8,149 | 168 bp | + | 41.1% |
| ATP6 | Protein-coding gene | 8,140 | 8,823 | 684 bp | + | 42.1% |
| COX3 | Protein-coding gene | 8,823 | 9,607 | 785 bp | + | 44.0% |
| tRNA-Gly | Transfer RNA | 9,608 | 9,679 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,680 | 10,028 | 349 bp | + | 45.9% |
| tRNA-Arg | Transfer RNA | 10,029 | 10,097 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,098 | 10,394 | 297 bp | + | 48.2% |
| ND4 | Protein-coding gene | 10,388 | 11,768 | 1,381 bp | + | 44.8% |
| tRNA-His | Transfer RNA | 11,769 | 11,839 | 71 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,840 | 11,911 | 72 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,922 | 11,994 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,995 | 13,833 | 1,839 bp | + | 45.3% |
| ND6 | Protein-coding gene | 13,830 | 14,351 | 522 bp | − | 45.6% |
| tRNA-Glu | Transfer RNA | 14,352 | 14,420 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,425 | 15,565 | 1,141 bp | + | 44.6% |
| tRNA-Thr | Transfer RNA | 15,566 | 15,638 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,638 | 15,707 | 70 bp | − | – |
| D-loop | Control region | 15,708 | 16,587 | 880 bp | – | 35.9% |