Cephalopholis taeniops
Bluespotted seabass
GC content
45.01%
Whole genome
Non-coding
937 bp
D-loop 873 bp
Where Bluespotted seabass sits among 2,335 species
Whole-genome GC content against maximum lifespan. Bluespotted seabass has the 945th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,572 bp
- GC skew (G − C) / (G + C)
- −0.277
- AT skew (A − T) / (A + T)
- +0.052
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,572 bp
Protein-coding11,411 bp
12S rRNA953 bp
16S rRNA1,712 bp
All tRNA1,563 bp
D-loop873 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 48.41% | −0.381 | +0.006 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,047 bp | 47.18% | −0.478 | +0.110 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 44.94% | −0.199 | −0.105 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.85% | −0.294 | +0.036 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 35.71% | −0.400 | +0.056 | |||||
| ATP6ATP synthase F0 subunit 6 | 687 bp | 43.52% | −0.411 | +0.010 | |||||
| COX3Cytochrome c oxidase subunit III | 786 bp | 45.55% | −0.296 | −0.019 | |||||
| ND3NADH dehydrogenase subunit 3 | 351 bp | 45.87% | −0.354 | −0.137 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 47.48% | −0.348 | −0.128 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 45.62% | −0.362 | +0.017 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 44.92% | −0.402 | +0.048 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 44.06% | −0.296 | +0.315 | |||||
| CYTBCytochrome b | 1,141 bp | 46.01% | −0.341 | −0.068 | |||||
| 12S rRNA12S ribosomal RNA | 953 bp | 48.90% | −0.112 | +0.195 | |||||
| 16S rRNA16S ribosomal RNA | 1,712 bp | 45.91% | −0.102 | +0.233 | |||||
| D-loopControl region (D-loop) | 873 bp | 36.31% | −0.148 | +0.036 |
Codon usage
Counts per codon, darker is more frequent3,811 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU84
UUC151
Leu L16.9%
UUA93
UUG16
CUU125
CUC152
CUA218
CUG41
Ile I7.3%
AUU159
AUC121
Met M4.1%
AUA103
AUG54
Val V5.7%
GUU57
GUC60
GUA82
GUG19
Ser S6.4%
UCU45
UCC65
UCA76
UCG5
AGU6
AGC45
Pro P5.7%
CCU57
CCC94
CCA59
CCG8
Thr T8.1%
ACU50
ACC110
ACA137
ACG11
Ala A9.1%
GCU62
GCC153
GCA118
GCG15
Tyr Y2.9%
UAU37
UAC75
His H2.8%
CAU29
CAC77
Gln Q2.6%
CAA91
CAG8
Asn N3.1%
AAU36
AAC81
Lys K2.0%
AAA73
AAG4
Asp D2.2%
GAU24
GAC58
Glu E2.5%
GAA82
GAG12
Cys C0.7%
UGU12
UGC14
Trp W3.1%
UGA98
UGG20
Arg R2.0%
CGU10
CGC12
CGA47
CGG7
Gly G6.4%
GGU52
GGC67
GGA83
GGG41
Stop 0.3%
UAA9
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_086959.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (45.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 71 | 1,023 | 953 bp | + | 48.9% |
| tRNA-Val | Transfer RNA | 1,024 | 1,095 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,096 | 2,807 | 1,712 bp | + | 45.9% |
| tRNA-Leu (UUR) | Transfer RNA | 2,808 | 2,882 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,883 | 3,857 | 975 bp | + | 48.4% |
| tRNA-Ile | Transfer RNA | 3,863 | 3,932 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,932 | 4,002 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 4,003 | 4,072 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,073 | 5,119 | 1,047 bp | + | 47.2% |
| tRNA-Trp | Transfer RNA | 5,119 | 5,189 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,191 | 5,259 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,260 | 5,332 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,370 | 5,437 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,438 | 5,508 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,510 | 7,060 | 1,551 bp | + | 44.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,061 | 7,131 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,133 | 7,205 | 73 bp | + | – |
| COX2 | Protein-coding gene | 7,214 | 7,904 | 691 bp | + | 43.9% |
| tRNA-Lys | Transfer RNA | 7,905 | 7,977 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,979 | 8,146 | 168 bp | + | 35.7% |
| ATP6 | Protein-coding gene | 8,134 | 8,820 | 687 bp | + | 43.5% |
| COX3 | Protein-coding gene | 8,820 | 9,605 | 786 bp | + | 45.6% |
| tRNA-Gly | Transfer RNA | 9,605 | 9,676 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,677 | 10,027 | 351 bp | + | 45.9% |
| tRNA-Arg | Transfer RNA | 10,026 | 10,094 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,095 | 10,391 | 297 bp | + | 47.5% |
| ND4 | Protein-coding gene | 10,385 | 11,765 | 1,381 bp | + | 45.6% |
| tRNA-His | Transfer RNA | 11,766 | 11,835 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,836 | 11,907 | 72 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,914 | 11,986 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,987 | 13,825 | 1,839 bp | + | 44.9% |
| ND6 | Protein-coding gene | 13,822 | 14,343 | 522 bp | − | 44.1% |
| tRNA-Glu | Transfer RNA | 14,344 | 14,412 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,417 | 15,557 | 1,141 bp | + | 46.0% |
| tRNA-Thr | Transfer RNA | 15,558 | 15,630 | 73 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,630 | 15,699 | 70 bp | − | – |
| D-loop | Control region | 15,700 | 16,572 | 873 bp | – | 36.3% |