Chamaeleo chamaeleon
Common chameleon
GC content
38.39%
Whole genome
Non-coding
2,267 bp
Including the D-loop
Where Common chameleon sits among 2,335 species
Whole-genome GC content against maximum lifespan. Common chameleon has the 2,159th longest lifespan of them.
- This species
- Other reptiles
- Other classes
Base composition
Whole genome17,470 bp
- GC skew (G − C) / (G + C)
- −0.363
- AT skew (A − T) / (A + T)
- +0.167
Life history
- Maximum lifespan
- 3.6 years
- Adult weight
- 36.5 g
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03314)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, small sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Unchanged since build 1
- In the database since
- build 1 (2015-07-01)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,470 bp
Protein-coding11,281 bp
12S rRNA923 bp
16S rRNA1,524 bp
All tRNA1,488 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 963 bp | 37.70% | −0.394 | +0.130 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,039 bp | 36.77% | −0.503 | +0.187 | |||||
| COX1Cytochrome c oxidase subunit I | 1,548 bp | 40.31% | −0.240 | +0.058 | |||||
| COX2Cytochrome c oxidase subunit II | 686 bp | 37.46% | −0.339 | +0.170 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 29.70% | −0.673 | +0.345 | |||||
| ATP6ATP synthase F0 subunit 6 | 670 bp | 37.91% | −0.512 | +0.168 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 37.37% | −0.263 | +0.067 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 37.54% | −0.466 | +0.092 | |||||
| ND4LNADH dehydrogenase subunit 4L | 288 bp | 35.07% | −0.426 | +0.230 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,353 bp | 37.55% | −0.500 | +0.186 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,821 bp | 36.02% | −0.512 | +0.205 | |||||
| ND6NADH dehydrogenase subunit 6 | 510 bp | 38.04% | −0.670 | +0.544 | |||||
| CYTBCytochrome b | 1,134 bp | 39.95% | −0.453 | +0.116 | |||||
| 12S rRNA12S ribosomal RNA | 923 bp | 42.90% | −0.182 | +0.268 | |||||
| 16S rRNA16S ribosomal RNA | 1,524 bp | 41.93% | −0.218 | +0.308 |
Codon usage
Counts per codon, darker is more frequent3,768 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.1%
UUU111
UUC82
Leu L15.2%
UUA122
UUG35
CUU70
CUC51
CUA267
CUG29
Ile I8.3%
AUU165
AUC149
Met M8.3%
AUA268
AUG44
Val V3.7%
GUU44
GUC20
GUA64
GUG10
Ser S6.9%
UCU40
UCC49
UCA118
UCG8
AGU14
AGC32
Pro P5.1%
CCU15
CCC38
CCA138
CCG3
Thr T11.1%
ACU67
ACC140
ACA208
ACG3
Ala A6.2%
GCU41
GCC90
GCA100
GCG4
Tyr Y3.1%
UAU46
UAC71
His H2.3%
CAU24
CAC64
Gln Q2.7%
CAA91
CAG9
Asn N4.3%
AAU48
AAC114
Lys K3.4%
AAA124
AAG3
Asp D1.7%
GAU28
GAC36
Glu E2.0%
GAA65
GAG10
Cys C0.8%
UGU13
UGC17
Trp W2.7%
UGA88
UGG13
Arg R1.7%
CGU5
CGC3
CGA53
CGG2
Gly G5.1%
GGU18
GGC43
GGA109
GGG24
Stop 0.2%
UAA4
UAG3
AGA0
AGG1
Genome map
37 annotated features in NC_012427.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (38.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 72 | 72 bp | + | – |
| 12S rRNA | Ribosomal RNA | 73 | 995 | 923 bp | + | 42.9% |
| tRNA-Val | Transfer RNA | 996 | 1,062 | 67 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,063 | 2,586 | 1,524 bp | + | 41.9% |
| tRNA-Leu (UUR) | Transfer RNA | 2,587 | 2,660 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,662 | 3,624 | 963 bp | + | 37.7% |
| tRNA-Gln | Transfer RNA | 3,621 | 3,691 | 71 bp | − | – |
| tRNA-Ile | Transfer RNA | 3,700 | 3,766 | 67 bp | + | – |
| tRNA-Met | Transfer RNA | 3,767 | 3,834 | 68 bp | + | – |
| ND2 | Protein-coding gene | 3,835 | 4,873 | 1,039 bp | + | 36.8% |
| tRNA-Trp | Transfer RNA | 4,874 | 4,944 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 4,950 | 5,015 | 66 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,031 | 5,102 | 72 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,128 | 5,183 | 56 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,188 | 5,252 | 65 bp | + | – |
| COX1 | Protein-coding gene | 5,253 | 6,800 | 1,548 bp | + | 40.3% |
| tRNA-Ser (UCN) | Transfer RNA | 6,792 | 6,861 | 70 bp | − | – |
| tRNA-Asp | Transfer RNA | 6,865 | 6,939 | 75 bp | + | – |
| COX2 | Protein-coding gene | 6,941 | 7,626 | 686 bp | + | 37.5% |
| tRNA-Lys | Transfer RNA | 7,627 | 7,690 | 64 bp | + | – |
| ATP8 | Protein-coding gene | 7,691 | 7,855 | 165 bp | + | 29.7% |
| ATP6 | Protein-coding gene | 7,849 | 8,518 | 670 bp | + | 37.9% |
| COX3 | Protein-coding gene | 8,519 | 9,302 | 784 bp | + | 37.4% |
| tRNA-Gly | Transfer RNA | 9,303 | 9,367 | 65 bp | + | – |
| ND3 | Protein-coding gene | 9,368 | 9,716 | 349 bp | + | 37.5% |
| tRNA-Arg | Transfer RNA | 9,717 | 9,784 | 68 bp | + | – |
| ND4L | Protein-coding gene | 9,785 | 10,072 | 288 bp | + | 35.1% |
| ND4 | Protein-coding gene | 10,066 | 11,418 | 1,353 bp | + | 37.6% |
| tRNA-His | Transfer RNA | 11,422 | 11,487 | 66 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,488 | 11,545 | 58 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,546 | 11,616 | 71 bp | + | – |
| ND5 | Protein-coding gene | 11,617 | 13,437 | 1,821 bp | + | 36.0% |
| ND6 | Protein-coding gene | 13,423 | 13,932 | 510 bp | − | 38.0% |
| tRNA-Glu | Transfer RNA | 13,933 | 14,001 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,003 | 15,136 | 1,134 bp | + | 40.0% |
| tRNA-Thr | Transfer RNA | 15,140 | 15,205 | 66 bp | + | – |
| tRNA-Pro | Transfer RNA | 17,154 | 17,220 | 67 bp | − | – |