Chanodichthys mongolicus
Mongolian redfin
GC content
43.97%
Whole genome
Non-coding
996 bp
D-loop 938 bp
Where Mongolian redfin sits among 2,335 species
Whole-genome GC content against maximum lifespan. Mongolian redfin has the 1,603rd longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,622 bp
- GC skew (G − C) / (G + C)
- −0.264
- AT skew (A − T) / (A + T)
- +0.113
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,622 bp
Protein-coding11,404 bp
12S rRNA963 bp
16S rRNA1,691 bp
All tRNA4,882 bp
D-loop938 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 45.44% | −0.327 | +0.083 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 44.31% | −0.417 | +0.151 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 44.87% | −0.187 | −0.041 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 43.99% | −0.250 | +0.075 | |||||
| ATP8ATP synthase F0 subunit 8 | 165 bp | 38.79% | −0.500 | +0.248 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 43.78% | −0.405 | +0.031 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 45.35% | −0.275 | +0.035 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 48.71% | −0.329 | +0.028 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 47.14% | −0.314 | −0.006 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,382 bp | 44.07% | −0.346 | +0.094 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,836 bp | 42.81% | −0.422 | +0.126 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 45.40% | −0.418 | +0.509 | |||||
| CYTBCytochrome b | 1,141 bp | 43.56% | −0.324 | +0.037 | |||||
| 12S rRNA12S ribosomal RNA | 963 bp | 49.33% | −0.082 | +0.225 | |||||
| 16S rRNA16S ribosomal RNA | 1,691 bp | 42.87% | −0.065 | +0.288 | |||||
| D-loopControl region (D-loop) | 938 bp | 34.54% | −0.216 | +0.042 |
Codon usage
Counts per codon, darker is more frequent3,804 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU64
UUC161
Leu L16.4%
UUA97
UUG17
CUU100
CUC98
CUA268
CUG43
Ile I7.5%
AUU151
AUC135
Met M4.6%
AUA123
AUG51
Val V6.2%
GUU50
GUC51
GUA104
GUG29
Ser S6.4%
UCU37
UCC65
UCA77
UCG6
AGU13
AGC44
Pro P5.7%
CCU27
CCC64
CCA116
CCG10
Thr T8.1%
ACU49
ACC103
ACA144
ACG11
Ala A8.8%
GCU43
GCC152
GCA122
GCG16
Tyr Y3.0%
UAU45
UAC68
His H2.7%
CAU26
CAC78
Gln Q2.5%
CAA89
CAG8
Asn N3.1%
AAU34
AAC85
Lys K2.1%
AAA72
AAG7
Asp D2.0%
GAU14
GAC63
Glu E2.7%
GAA83
GAG20
Cys C0.7%
UGU8
UGC17
Trp W3.2%
UGA111
UGG10
Arg R2.0%
CGU12
CGC10
CGA51
CGG3
Gly G6.4%
GGU35
GGC43
GGA129
GGG36
Stop 0.2%
UAA3
UAG3
AGA0
AGG0
Genome map
38 annotated features in NC_008683.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (44.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,032 | 963 bp | + | 49.3% |
| tRNA-Ile | Transfer RNA | 385 | 3,923 | 3,539 bp | + | – |
| tRNA-Val | Transfer RNA | 1,033 | 1,104 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,105 | 2,795 | 1,691 bp | + | 42.9% |
| tRNA-Leu (UUR) | Transfer RNA | 2,796 | 2,871 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,873 | 3,847 | 975 bp | + | 45.4% |
| tRNA-Gln | Transfer RNA | 3,922 | 3,992 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,994 | 4,062 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,063 | 5,107 | 1,045 bp | + | 44.3% |
| tRNA-Trp | Transfer RNA | 5,108 | 5,178 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,180 | 5,248 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,250 | 5,322 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,354 | 5,421 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,423 | 5,493 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,495 | 7,045 | 1,551 bp | + | 44.9% |
| tRNA-Ser (UCN) | Transfer RNA | 7,046 | 7,116 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,120 | 7,193 | 74 bp | + | – |
| COX2 | Protein-coding gene | 7,207 | 7,897 | 691 bp | + | 44.0% |
| tRNA-Lys | Transfer RNA | 7,898 | 7,973 | 76 bp | + | – |
| ATP8 | Protein-coding gene | 7,975 | 8,139 | 165 bp | + | 38.8% |
| ATP6 | Protein-coding gene | 8,133 | 8,815 | 683 bp | + | 43.8% |
| COX3 | Protein-coding gene | 8,816 | 9,600 | 785 bp | + | 45.4% |
| tRNA-Gly | Transfer RNA | 9,601 | 9,672 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,673 | 10,021 | 349 bp | + | 48.7% |
| tRNA-Arg | Transfer RNA | 10,022 | 10,091 | 70 bp | + | – |
| ND4L | Protein-coding gene | 10,092 | 10,388 | 297 bp | + | 47.1% |
| ND4 | Protein-coding gene | 10,382 | 11,763 | 1,382 bp | + | 44.1% |
| tRNA-His | Transfer RNA | 11,764 | 11,832 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,833 | 11,901 | 69 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,903 | 11,975 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,976 | 13,811 | 1,836 bp | + | 42.8% |
| ND6 | Protein-coding gene | 13,808 | 14,329 | 522 bp | − | 45.4% |
| tRNA-Glu | Transfer RNA | 14,330 | 14,398 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,403 | 15,543 | 1,141 bp | + | 43.6% |
| tRNA-Thr | Transfer RNA | 15,544 | 15,615 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,615 | 15,684 | 70 bp | − | – |
| D-loop | Control region | 15,685 | 16,622 | 938 bp | – | 34.5% |