Chionoecetes bairdi
Tanner crab
GC content
28.62%
Whole genome
Non-coding
1,586 bp
D-loop 1,488 bp
Where Tanner crab sits among 2,335 species
Whole-genome GC content against maximum lifespan. Tanner crab has the 1,436th longest lifespan of them.
- This species
- All other species
Base composition
Whole genome16,326 bp
- GC skew (G − C) / (G + C)
- −0.235
- AT skew (A − T) / (A + T)
- −0.023
About this record
- Lifespan source
- SeaLifeBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,326 bp
Protein-coding11,167 bp
12S rRNA815 bp
16S rRNA1,312 bp
All tRNA1,448 bp
D-loop1,488 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 957 bp | 29.36% | −0.324 | +0.237 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,006 bp | 26.74% | −0.338 | −0.197 | |||||
| COX1Cytochrome c oxidase subunit I | 1,534 bp | 35.01% | −0.058 | −0.170 | |||||
| COX2Cytochrome c oxidase subunit II | 688 bp | 32.27% | −0.117 | −0.077 | |||||
| ATP8ATP synthase F0 subunit 8 | 159 bp | 22.64% | −0.222 | −0.073 | |||||
| ATP6ATP synthase F0 subunit 6 | 675 bp | 29.33% | −0.192 | −0.178 | |||||
| COX3Cytochrome c oxidase subunit III | 790 bp | 35.06% | −0.148 | −0.185 | |||||
| ND3NADH dehydrogenase subunit 3 | 354 bp | 27.12% | −0.104 | −0.240 | |||||
| ND4LNADH dehydrogenase subunit 4L | 282 bp | 28.72% | −0.383 | +0.274 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,368 bp | 28.29% | −0.370 | +0.189 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,728 bp | 26.39% | −0.320 | +0.112 | |||||
| ND6NADH dehydrogenase subunit 6 | 507 bp | 25.44% | −0.318 | −0.212 | |||||
| CYTBCytochrome b | 1,135 bp | 32.51% | −0.160 | −0.193 | |||||
| 12S rRNA12S ribosomal RNA | 815 bp | 25.40% | −0.246 | −0.046 | |||||
| 16S rRNA16S ribosomal RNA | 1,312 bp | 25.15% | −0.303 | −0.004 | |||||
| D-loopControl region (D-loop) | 1,488 bp | 25.94% | −0.342 | +0.044 |
Codon usage
Counts per codon, darker is more frequent3,726 codons in all protein-coding genes. Grouped with the Invertebrate mitochondrial code (NCBI table 5).
Phe F8.2%
UUU263
UUC44
Leu L15.6%
UUA363
UUG49
CUU82
CUC15
CUA61
CUG11
Ile I9.1%
AUU298
AUC42
Met M6.7%
AUA208
AUG43
Val V6.3%
GUU109
GUC10
GUA95
GUG22
Ser S10.3%
UCU135
UCC26
UCA70
UCG5
AGU44
AGC9
AGA60
AGG34
Pro P3.8%
CCU79
CCC23
CCA39
CCG2
Thr T4.6%
ACU83
ACC25
ACA60
ACG5
Ala A5.2%
GCU117
GCC30
GCA42
GCG6
Tyr Y3.9%
UAU115
UAC30
His H2.1%
CAU47
CAC32
Gln Q1.9%
CAA61
CAG8
Asn N3.7%
AAU102
AAC37
Lys K2.6%
AAA81
AAG15
Asp D1.9%
GAU55
GAC17
Glu E2.2%
GAA52
GAG29
Cys C1.1%
UGU33
UGC8
Trp W2.6%
UGA75
UGG21
Arg R1.6%
CGU19
CGC5
CGA30
CGG4
Gly G6.3%
GGU62
GGC18
GGA98
GGG55
Stop 0.2%
UAA7
UAG1
Genome map
38 annotated features in NC_068523.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (28.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| COX1 | Protein-coding gene | 1 | 1,534 | 1,534 bp | + | 35.0% |
| tRNA-Leu | Transfer RNA | 1,535 | 1,599 | 65 bp | + | – |
| COX2 | Protein-coding gene | 1,609 | 2,296 | 688 bp | + | 32.3% |
| tRNA-Lys | Transfer RNA | 2,297 | 2,363 | 67 bp | + | – |
| tRNA-Asp | Transfer RNA | 2,364 | 2,427 | 64 bp | + | – |
| ATP8 | Protein-coding gene | 2,428 | 2,586 | 159 bp | + | 22.6% |
| ATP6 | Protein-coding gene | 2,580 | 3,254 | 675 bp | + | 29.3% |
| COX3 | Protein-coding gene | 3,254 | 4,043 | 790 bp | + | 35.1% |
| tRNA-Gly | Transfer RNA | 4,044 | 4,107 | 64 bp | + | – |
| ND3 | Protein-coding gene | 4,108 | 4,461 | 354 bp | + | 27.1% |
| tRNA-Ala | Transfer RNA | 4,460 | 4,523 | 64 bp | + | – |
| tRNA-Arg | Transfer RNA | 4,524 | 4,584 | 61 bp | + | – |
| tRNA-Asn | Transfer RNA | 4,585 | 4,650 | 66 bp | + | – |
| tRNA-Ser | Transfer RNA | 4,654 | 4,721 | 68 bp | + | – |
| tRNA-Glu | Transfer RNA | 4,724 | 4,790 | 67 bp | + | – |
| tRNA-His | Transfer RNA | 4,811 | 4,874 | 64 bp | − | – |
| tRNA-Phe | Transfer RNA | 4,875 | 4,938 | 64 bp | − | – |
| ND5 | Protein-coding gene | 4,940 | 6,667 | 1,728 bp | − | 26.4% |
| ND4 | Protein-coding gene | 6,671 | 8,038 | 1,368 bp | − | 28.3% |
| ND4L | Protein-coding gene | 8,032 | 8,313 | 282 bp | − | 28.7% |
| tRNA-Thr | Transfer RNA | 8,334 | 8,397 | 64 bp | + | – |
| tRNA-Pro | Transfer RNA | 8,398 | 8,460 | 63 bp | − | – |
| ND6 | Protein-coding gene | 8,463 | 8,969 | 507 bp | + | 25.4% |
| CYTB | Protein-coding gene | 8,969 | 10,103 | 1,135 bp | + | 32.5% |
| tRNA-Ser | Transfer RNA | 10,104 | 10,170 | 67 bp | + | – |
| ND1 | Protein-coding gene | 10,196 | 11,152 | 957 bp | − | 29.4% |
| tRNA-Leu | Transfer RNA | 11,158 | 11,223 | 66 bp | − | – |
| 16S rRNA | Ribosomal RNA | 11,224 | 12,535 | 1,312 bp | − | 25.2% |
| tRNA-Val | Transfer RNA | 12,537 | 12,609 | 73 bp | − | – |
| 12S rRNA | Ribosomal RNA | 12,610 | 13,424 | 815 bp | − | 25.4% |
| D-loop | Control region | 13,425 | 14,912 | 1,488 bp | – | 25.9% |
| tRNA-Ile | Transfer RNA | 14,913 | 14,982 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 14,980 | 15,051 | 72 bp | − | – |
| tRNA-Met | Transfer RNA | 15,058 | 15,124 | 67 bp | + | – |
| ND2 | Protein-coding gene | 15,125 | 16,130 | 1,006 bp | + | 26.7% |
| tRNA-Trp | Transfer RNA | 16,131 | 16,198 | 68 bp | + | – |
| tRNA-Cys | Transfer RNA | 16,200 | 16,262 | 63 bp | − | – |
| tRNA-Tyr | Transfer RNA | 16,263 | 16,326 | 64 bp | − | – |