Chlorurus sordidus
Daisy parrotfish
GC content
46.53%
Whole genome
Non-coding
1,090 bp
D-loop 920 bp
Where Daisy parrotfish sits among 2,335 species
Whole-genome GC content against maximum lifespan. Daisy parrotfish has the 1,006th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,681 bp
- GC skew (G − C) / (G + C)
- −0.271
- AT skew (A − T) / (A + T)
- +0.029
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an observed animal, origin not stated
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,681 bp
Protein-coding11,400 bp
12S rRNA954 bp
16S rRNA1,685 bp
All tRNA1,552 bp
D-loop920 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 972 bp | 49.59% | −0.328 | −0.069 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 48.61% | −0.437 | −0.024 | |||||
| COX1Cytochrome c oxidase subunit I | 1,549 bp | 46.74% | −0.227 | −0.081 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.31% | −0.306 | +0.019 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 42.26% | −0.296 | −0.010 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 47.29% | −0.356 | −0.089 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 48.15% | −0.291 | −0.012 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 44.13% | −0.377 | −0.159 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 49.50% | −0.374 | −0.120 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,380 bp | 47.68% | −0.368 | −0.036 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 45.90% | −0.370 | +0.013 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 48.08% | −0.355 | +0.424 | |||||
| CYTBCytochrome b | 1,141 bp | 45.31% | −0.319 | −0.074 | |||||
| 12S rRNA12S ribosomal RNA | 954 bp | 48.22% | −0.061 | +0.170 | |||||
| 16S rRNA16S ribosomal RNA | 1,685 bp | 45.99% | −0.092 | +0.240 | |||||
| D-loopControl region (D-loop) | 920 bp | 39.57% | −0.324 | +0.022 |
Codon usage
Counts per codon, darker is more frequent3,804 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU99
UUC135
Leu L17.1%
UUA70
UUG24
CUU179
CUC160
CUA168
CUG50
Ile I6.8%
AUU119
AUC141
Met M3.9%
AUA65
AUG83
Val V6.3%
GUU85
GUC64
GUA68
GUG22
Ser S6.6%
UCU51
UCC71
UCA64
UCG13
AGU8
AGC43
Pro P5.7%
CCU53
CCC87
CCA67
CCG10
Thr T7.7%
ACU60
ACC110
ACA109
ACG14
Ala A9.3%
GCU69
GCC139
GCA128
GCG19
Tyr Y3.1%
UAU30
UAC87
His H2.9%
CAU24
CAC85
Gln Q2.4%
CAA84
CAG8
Asn N3.0%
AAU25
AAC91
Lys K2.0%
AAA68
AAG9
Asp D1.9%
GAU16
GAC58
Glu E2.7%
GAA84
GAG18
Cys C0.7%
UGU11
UGC17
Trp W3.1%
UGA100
UGG18
Arg R2.0%
CGU12
CGC12
CGA38
CGG14
Gly G6.4%
GGU30
GGC89
GGA80
GGG43
Stop 0.2%
UAA5
UAG1
AGA0
AGG0
Genome map
38 annotated features in NC_006355.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (46.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,022 | 954 bp | + | 48.2% |
| tRNA-Val | Transfer RNA | 1,023 | 1,093 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,094 | 2,778 | 1,685 bp | + | 46.0% |
| tRNA-Leu (UUR) | Transfer RNA | 2,779 | 2,852 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,855 | 3,826 | 972 bp | + | 49.6% |
| tRNA-Ile | Transfer RNA | 3,829 | 3,898 | 70 bp | + | – |
| tRNA-Met | Transfer RNA | 3,906 | 3,975 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,985 | 4,055 | 71 bp | − | – |
| ND2 | Protein-coding gene | 4,122 | 5,166 | 1,045 bp | + | 48.6% |
| tRNA-Trp | Transfer RNA | 5,167 | 5,237 | 71 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,240 | 5,308 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,313 | 5,385 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,429 | 5,496 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,497 | 5,566 | 70 bp | − | – |
| COX1 | Protein-coding gene | 5,568 | 7,116 | 1,549 bp | + | 46.7% |
| tRNA-Ser (UCN) | Transfer RNA | 7,119 | 7,189 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,194 | 7,263 | 70 bp | + | – |
| COX2 | Protein-coding gene | 7,270 | 7,960 | 691 bp | + | 46.3% |
| tRNA-Lys | Transfer RNA | 7,961 | 8,034 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 8,036 | 8,203 | 168 bp | + | 42.3% |
| ATP6 | Protein-coding gene | 8,194 | 8,876 | 683 bp | + | 47.3% |
| COX3 | Protein-coding gene | 8,877 | 9,661 | 785 bp | + | 48.2% |
| tRNA-Gly | Transfer RNA | 9,662 | 9,733 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,738 | 10,086 | 349 bp | + | 44.1% |
| tRNA-Arg | Transfer RNA | 10,087 | 10,155 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,156 | 10,452 | 297 bp | + | 49.5% |
| ND4 | Protein-coding gene | 10,446 | 11,825 | 1,380 bp | + | 47.7% |
| tRNA-His | Transfer RNA | 11,828 | 11,896 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,896 | 11,966 | 71 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,976 | 12,047 | 72 bp | + | – |
| ND5 | Protein-coding gene | 12,048 | 13,886 | 1,839 bp | + | 45.9% |
| ND6 | Protein-coding gene | 13,883 | 14,404 | 522 bp | − | 48.1% |
| tRNA-Glu | Transfer RNA | 14,406 | 14,473 | 68 bp | − | – |
| CYTB | Protein-coding gene | 14,479 | 15,619 | 1,141 bp | + | 45.3% |
| tRNA-Thr | Transfer RNA | 15,620 | 15,690 | 71 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,690 | 15,761 | 72 bp | − | – |
| D-loop | Control region | 15,762 | 16,681 | 920 bp | – | 39.6% |