Chrysemys picta
Painted turtle
GC content
38.78%
Whole genome
Non-coding
1,380 bp
D-loop 1,179 bp
Where Painted turtle sits among 2,335 species
Whole-genome GC content against maximum lifespan. Painted turtle has the 86th longest lifespan of them.
- This species
- Other reptiles
- Other classes
Base composition
Whole genome16,866 bp
- GC skew (G − C) / (G + C)
- −0.338
- AT skew (A − T) / (A + T)
- +0.125
Life history
- Maximum lifespan
- 61 years
- Adult weight
- 371.8 g
- Basal metabolic rate
- 0.024 W
- Body temperature
- 16.4 °C
- Female sexual maturity
- 7.5 years
- Male sexual maturity
- 4.5 years
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03692)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in the wild
- Data quality
- acceptable, medium sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Updated in build 2
- In the database since
- build 1 (2015-07-01)
- Last changed
- build 2 (2026-11-13)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,866 bp
Protein-coding11,364 bp
12S rRNA969 bp
16S rRNA1,614 bp
All tRNA1,548 bp
D-loop1,179 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 971 bp | 38.41% | −0.453 | +0.064 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,039 bp | 38.11% | −0.586 | +0.229 | |||||
| COX1Cytochrome c oxidase subunit I | 1,548 bp | 40.83% | −0.199 | 0.000 | |||||
| COX2Cytochrome c oxidase subunit II | 687 bp | 38.72% | −0.316 | +0.135 | |||||
| ATP8ATP synthase F0 subunit 8 | 189 bp | 33.86% | −0.656 | +0.200 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 40.79% | −0.477 | +0.106 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 41.84% | −0.287 | +0.031 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 38.97% | −0.338 | +0.014 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 37.71% | −0.446 | −0.005 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 39.39% | −0.467 | +0.149 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,809 bp | 38.70% | −0.409 | +0.095 | |||||
| ND6NADH dehydrogenase subunit 6 | 525 bp | 40.76% | −0.598 | +0.524 | |||||
| CYTBCytochrome b | 1,140 bp | 41.93% | −0.464 | +0.066 | |||||
| 12S rRNA12S ribosomal RNA | 969 bp | 40.97% | −0.169 | +0.280 | |||||
| 16S rRNA16S ribosomal RNA | 1,614 bp | 38.60% | −0.149 | +0.302 | |||||
| D-loopControl region (D-loop) | 1,179 bp | 28.58% | −0.181 | −0.050 |
Codon usage
Counts per codon, darker is more frequent3,799 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F5.9%
UUU94
UUC132
Leu L16.1%
UUA150
UUG22
CUU70
CUC72
CUA274
CUG24
Ile I7.9%
AUU151
AUC150
Met M6.2%
AUA211
AUG26
Val V4.4%
GUU27
GUC24
GUA100
GUG16
Ser S7.2%
UCU44
UCC62
UCA116
UCG7
AGU14
AGC29
Pro P5.5%
CCU19
CCC42
CCA139
CCG9
Thr T9.6%
ACU74
ACC125
ACA162
ACG5
Ala A6.4%
GCU54
GCC94
GCA92
GCG4
Tyr Y3.3%
UAU50
UAC77
His H2.8%
CAU40
CAC67
Gln Q2.6%
CAA91
CAG7
Asn N3.7%
AAU43
AAC97
Lys K2.4%
AAA91
AAG1
Asp D1.6%
GAU23
GAC37
Glu E2.4%
GAA81
GAG11
Cys C0.8%
UGU13
UGC17
Trp W3.0%
UGA101
UGG12
Arg R1.9%
CGU8
CGC13
CGA45
CGG5
Gly G6.0%
GGU47
GGC55
GGA97
GGG28
Stop 0.2%
UAA5
UAG1
AGA0
AGG2
Genome map
38 annotated features in NC_002073.3Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (38.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 70 | 70 bp | + | – |
| 12S rRNA | Ribosomal RNA | 71 | 1,039 | 969 bp | + | 41.0% |
| tRNA-Val | Transfer RNA | 1,040 | 1,108 | 69 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,110 | 2,723 | 1,614 bp | + | 38.6% |
| tRNA-Leu (UUR) | Transfer RNA | 2,724 | 2,799 | 76 bp | + | – |
| ND1 | Protein-coding gene | 2,800 | 3,770 | 971 bp | + | 38.4% |
| tRNA-Ile | Transfer RNA | 3,771 | 3,841 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,841 | 3,912 | 72 bp | − | – |
| tRNA-Met | Transfer RNA | 3,912 | 3,980 | 69 bp | + | – |
| ND2 | Protein-coding gene | 3,981 | 5,019 | 1,039 bp | + | 38.1% |
| tRNA-Trp | Transfer RNA | 5,020 | 5,094 | 75 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,096 | 5,164 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,166 | 5,238 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,264 | 5,329 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,329 | 5,399 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,401 | 6,948 | 1,548 bp | + | 40.8% |
| tRNA-Ser (UCN) | Transfer RNA | 6,940 | 7,010 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,013 | 7,082 | 70 bp | + | – |
| COX2 | Protein-coding gene | 7,083 | 7,769 | 687 bp | + | 38.7% |
| tRNA-Lys | Transfer RNA | 7,771 | 7,841 | 71 bp | + | – |
| ATP8 | Protein-coding gene | 7,843 | 8,031 | 189 bp | + | 33.9% |
| ATP6 | Protein-coding gene | 8,001 | 8,684 | 684 bp | + | 40.8% |
| COX3 | Protein-coding gene | 8,684 | 9,467 | 784 bp | + | 41.8% |
| tRNA-Gly | Transfer RNA | 9,468 | 9,535 | 68 bp | + | – |
| ND3 | Protein-coding gene | 9,537 | 9,886 | 350 bp | + | 39.0% |
| tRNA-Arg | Transfer RNA | 9,887 | 9,956 | 70 bp | + | – |
| ND4L | Protein-coding gene | 9,957 | 10,253 | 297 bp | + | 37.7% |
| ND4 | Protein-coding gene | 10,247 | 11,627 | 1,381 bp | + | 39.4% |
| tRNA-His | Transfer RNA | 11,628 | 11,697 | 70 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,698 | 11,763 | 66 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,763 | 11,834 | 72 bp | + | – |
| ND5 | Protein-coding gene | 11,835 | 13,643 | 1,809 bp | + | 38.7% |
| ND6 | Protein-coding gene | 13,803 | 14,327 | 525 bp | − | 40.8% |
| tRNA-Glu | Transfer RNA | 14,328 | 14,395 | 68 bp | − | – |
| CYTB | Protein-coding gene | 14,399 | 15,538 | 1,140 bp | + | 41.9% |
| tRNA-Thr | Transfer RNA | 15,543 | 15,617 | 75 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,618 | 15,687 | 70 bp | − | – |
| D-loop | Control region | 15,688 | 16,866 | 1,179 bp | – | 28.6% |