MitoAge

Ciconia ciconia

European white stork

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Maximum lifespan
39 yr
AnAge record
mtDNA size
17,347 bp
RefSeq NC_002197.1
GC content
46.34%
Whole genome
Non-coding
1,855 bp
D-loop 1,779 bp

Where European white stork sits among 2,335 species

Whole-genome GC content against maximum lifespan. European white stork has the 274th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %European white stork
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Plot other mtDNA features with this species highlighted

Base composition

Whole genome17,347 bp
GC skew (G − C) / (G + C)
−0.380
AT skew (A − T) / (A + T)
+0.138

Life history

Maximum lifespan
39 years
Adult weight
3.4 kg
Female sexual maturity
4 years
Male sexual maturity
4 years
Gestation or incubation
33 days
Litter or clutch size
4
Postnatal growth rate
0.17 per day

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 00572)

About this record

Lifespan source
AnAge build 15
Based on
an animal in the wild
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome17,347 bp
Protein-coding11,378 bp
12S rRNA968 bp
16S rRNA1,608 bp
All tRNA1,550 bp
D-loop1,779 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1978 bp27.8%26.2%13.0%33.0%46.01%−0.436+0.030
ND2NADH dehydrogenase subunit 21,041 bp31.6%23.1%9.8%35.5%45.34%−0.568+0.156
COX1Cytochrome c oxidase subunit I1,551 bp27.9%24.6%15.7%31.9%47.52%−0.341+0.064
COX2Cytochrome c oxidase subunit II684 bp30.4%23.5%14.9%31.1%46.05%−0.352+0.127
ATP8ATP synthase F0 subunit 8168 bp33.9%24.4%6.5%35.1%41.67%−0.686+0.163
ATP6ATP synthase F0 subunit 6684 bp30.1%24.0%10.4%35.5%45.91%−0.548+0.114
COX3Cytochrome c oxidase subunit III784 bp27.7%24.9%14.9%32.5%47.45%−0.371+0.053
ND3NADH dehydrogenase subunit 3351 bp27.6%24.2%11.4%36.8%48.15%−0.527+0.066
ND4LNADH dehydrogenase subunit 4L297 bp27.3%24.6%12.8%35.4%48.15%−0.469+0.052
ND4NADH dehydrogenase subunit 41,381 bp30.8%22.0%9.7%37.5%47.21%−0.589+0.166
ND5NADH dehydrogenase subunit 51,812 bp30.6%20.8%12.0%36.6%48.62%−0.505+0.192
ND6NADH dehydrogenase subunit 6522 bp37.2%12.1%12.8%37.9%50.77%−0.494+0.510
CYTBCytochrome b1,143 bp25.6%23.8%13.4%37.2%50.57%−0.471+0.037
12S rRNA12S ribosomal RNA968 bp32.1%19.6%19.7%28.5%48.24%−0.182+0.242
16S rRNA16S ribosomal RNA1,608 bp34.0%20.0%18.5%27.5%46.02%−0.197+0.258
D-loopControl region (D-loop)1,779 bp31.1%28.4%17.9%22.6%40.53%−0.115+0.045

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.6%
UUU52
UUC159
Leu L17.9%
UUA44
UUG13
CUU68
CUC175
CUA347
CUG33
Ile I7.7%
AUU69
AUC222
Met M4.1%
AUA130
AUG26
Val V4.2%
GUU33
GUC50
GUA61
GUG17
Ser S7.2%
UCU23
UCC113
UCA81
UCG3
AGU6
AGC46
Pro P5.9%
CCU26
CCC89
CCA105
CCG5
Thr T9.7%
ACU46
ACC164
ACA147
ACG13
Ala A8.0%
GCU52
GCC152
GCA91
GCG8
Tyr Y2.9%
UAU25
UAC84
His H2.9%
CAU25
CAC84
Gln Q2.6%
CAA84
CAG16
Asn N3.3%
AAU23
AAC103
Lys K2.2%
AAA76
AAG7
Asp D1.7%
GAU18
GAC45
Glu E2.5%
GAA73
GAG23
Cys C0.8%
UGU6
UGC25
Trp W2.8%
UGA94
UGG12
Arg R1.9%
CGU5
CGC20
CGA43
CGG3
Gly G5.9%
GGU22
GGC87
GGA78
GGG37
Stop 0.3%
UAA7
UAG1
AGA0
AGG3

Genome map

38 annotated features in NC_002197.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (46.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
D-loopControl region11,7791,779 bp–40.5%
tRNA-PheTransfer RNA1,7801,84970 bp+–
12S rRNARibosomal RNA1,8502,817968 bp+48.2%
tRNA-ValTransfer RNA2,8182,88871 bp+–
16S rRNARibosomal RNA2,8894,4961,608 bp+46.0%
tRNA-Leu (UUR)Transfer RNA4,4974,57074 bp+–
ND1Protein-coding gene4,5885,565978 bp+46.0%
tRNA-IleTransfer RNA5,5645,63572 bp+–
tRNA-GlnTransfer RNA5,6445,71471 bp−–
tRNA-MetTransfer RNA5,7155,78268 bp+–
ND2Protein-coding gene5,7836,8231,041 bp+45.3%
tRNA-TrpTransfer RNA6,8236,89876 bp+–
tRNA-AlaTransfer RNA6,9006,96869 bp−–
tRNA-AsnTransfer RNA6,9717,04373 bp−–
tRNA-CysTransfer RNA7,0467,11267 bp−–
tRNA-TyrTransfer RNA7,1137,18270 bp−–
COX1Protein-coding gene7,1848,7341,551 bp+47.5%
tRNA-Ser (UCN)Transfer RNA8,7268,79974 bp−–
tRNA-AspTransfer RNA8,8028,87069 bp+–
COX2Protein-coding gene8,8729,555684 bp+46.1%
tRNA-LysTransfer RNA9,5579,62872 bp+–
ATP8Protein-coding gene9,6309,797168 bp+41.7%
ATP6Protein-coding gene9,78810,471684 bp+45.9%
COX3Protein-coding gene10,47111,254784 bp+47.5%
tRNA-GlyTransfer RNA11,25511,32369 bp+–
ND3Protein-coding gene11,32411,674351 bp+48.2%
tRNA-ArgTransfer RNA11,67911,74769 bp+–
ND4LProtein-coding gene11,74912,045297 bp+48.2%
ND4Protein-coding gene12,03913,4191,381 bp+47.2%
tRNA-HisTransfer RNA13,42013,48970 bp+–
tRNA-Ser (AGY)Transfer RNA13,49113,55464 bp+–
tRNA-Leu (CUN)Transfer RNA13,55513,62571 bp+–
ND5Protein-coding gene13,62615,4371,812 bp+48.6%
CYTBProtein-coding gene15,44816,5901,143 bp+50.6%
tRNA-ThrTransfer RNA16,59216,65968 bp+–
tRNA-ProTransfer RNA16,67116,74070 bp−–
ND6Protein-coding gene16,75117,272522 bp−50.8%
tRNA-GluTransfer RNA17,27517,34773 bp−–

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