MitoAge

Clethrionomys rutilus

Northern red-backed vole

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Maximum lifespan
2.1 yr
AnAge record
mtDNA size
16,350 bp
RefSeq NC_081589.1
GC content
40.17%
Whole genome
Non-coding
1,002 bp
Including the D-loop

Where Northern red-backed vole sits among 2,335 species

Whole-genome GC content against maximum lifespan. Northern red-backed vole has the 2,251st longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Northern red-backed vole
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,350 bp
GC skew (G − C) / (G + C)
−0.345
AT skew (A − T) / (A + T)
+0.102

Life history

Maximum lifespan
2.1 years
Adult weight
20 g
Birth weight
1.8 g
Gestation or incubation
18 days
Litter or clutch size
5.6
Litters per year
4.2

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02900)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,350 bp
Protein-coding11,342 bp
12S rRNA948 bp
16S rRNA1,571 bp
All tRNA1,498 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp31.6%27.6%11.1%29.6%40.73%−0.455+0.067
ND2NADH dehydrogenase subunit 21,035 bp35.0%26.8%8.4%29.9%38.26%−0.561+0.133
COX1Cytochrome c oxidase subunit I1,545 bp28.9%27.9%16.0%27.2%43.24%−0.260+0.017
COX2Cytochrome c oxidase subunit II684 bp32.9%26.0%13.5%27.6%41.08%−0.345+0.117
ATP8ATP synthase F0 subunit 8204 bp34.8%32.4%7.8%25.0%32.84%−0.522+0.037
ATP6ATP synthase F0 subunit 6681 bp29.7%27.8%11.0%31.6%42.58%−0.483+0.033
COX3Cytochrome c oxidase subunit III785 bp28.4%28.2%14.1%29.3%43.44%−0.349+0.005
ND3NADH dehydrogenase subunit 3348 bp33.3%28.7%11.2%26.7%37.93%−0.409+0.074
ND4LNADH dehydrogenase subunit 4L297 bp29.3%28.3%11.8%30.6%42.42%−0.444+0.018
ND4NADH dehydrogenase subunit 41,383 bp33.7%25.8%10.5%30.0%40.49%−0.482+0.132
ND5NADH dehydrogenase subunit 51,812 bp32.7%26.8%10.7%29.9%40.51%−0.474+0.100
ND6NADH dehydrogenase subunit 6525 bp40.6%19.6%8.8%31.0%39.81%−0.560+0.348
CYTBCytochrome b1,143 bp30.1%27.3%13.2%29.4%42.61%−0.380+0.049
12S rRNA12S ribosomal RNA948 bp36.7%23.7%17.5%22.0%39.56%−0.115+0.215
16S rRNA16S ribosomal RNA1,571 bp37.4%23.9%17.6%21.1%38.77%−0.090+0.220

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.4%
UUU81
UUC162
Leu L15.4%
UUA116
UUG12
CUU77
CUC96
CUA253
CUG29
Ile I9.7%
AUU155
AUC214
Met M6.0%
AUA193
AUG33
Val V4.6%
GUU31
GUC48
GUA76
GUG19
Ser S7.7%
UCU41
UCC81
UCA109
UCG9
AGU12
AGC39
Pro P5.3%
CCU41
CCC47
CCA113
CCG0
Thr T8.0%
ACU47
ACC93
ACA159
ACG5
Ala A6.6%
GCU37
GCC128
GCA79
GCG5
Tyr Y3.2%
UAU53
UAC68
His H2.6%
CAU23
CAC74
Gln Q2.1%
CAA74
CAG5
Asn N4.3%
AAU35
AAC129
Lys K2.6%
AAA96
AAG2
Asp D2.0%
GAU23
GAC52
Glu E2.6%
GAA83
GAG14
Cys C0.9%
UGU10
UGC23
Trp W2.7%
UGA96
UGG7
Arg R1.7%
CGU5
CGC11
CGA43
CGG5
Gly G5.7%
GGU30
GGC65
GGA84
GGG37
Stop 0.3%
UAA11
UAG0
AGA0
AGG0

Genome map

37 annotated features in NC_081589.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (40.2%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA18825366 bp+–
12S rRNARibosomal RNA2561,203948 bp+39.6%
tRNA-ValTransfer RNA1,2041,27471 bp+–
16S rRNARibosomal RNA1,2732,8431,571 bp+38.8%
tRNA-Leu (UUR)Transfer RNA2,8442,91875 bp+–
ND1Protein-coding gene2,9193,873955 bp+40.7%
tRNA-IleTransfer RNA3,8743,94269 bp+–
tRNA-GlnTransfer RNA3,9404,01172 bp−–
tRNA-MetTransfer RNA4,0124,08069 bp+–
ND2Protein-coding gene4,0815,1151,035 bp+38.3%
tRNA-TrpTransfer RNA5,1185,18467 bp+–
tRNA-AlaTransfer RNA5,1865,25469 bp−–
tRNA-AsnTransfer RNA5,2575,32670 bp−–
tRNA-CysTransfer RNA5,3585,42568 bp−–
tRNA-TyrTransfer RNA5,4265,49267 bp−–
COX1Protein-coding gene5,4947,0381,545 bp+43.2%
tRNA-Ser (UCN)Transfer RNA7,0367,10469 bp−–
tRNA-AspTransfer RNA7,1087,17568 bp+–
COX2Protein-coding gene7,1777,860684 bp+41.1%
tRNA-LysTransfer RNA7,8647,92764 bp+–
ATP8Protein-coding gene7,9288,131204 bp+32.8%
ATP6Protein-coding gene8,0898,769681 bp+42.6%
COX3Protein-coding gene8,7699,553785 bp+43.4%
tRNA-GlyTransfer RNA9,5539,62169 bp+–
ND3Protein-coding gene9,6229,969348 bp+37.9%
tRNA-ArgTransfer RNA9,97110,03868 bp+–
ND4LProtein-coding gene10,04110,337297 bp+42.4%
ND4Protein-coding gene10,33111,7131,383 bp+40.5%
tRNA-HisTransfer RNA11,70911,77668 bp+–
tRNA-Ser (AGY)Transfer RNA11,77711,83559 bp+–
tRNA-Leu (CUN)Transfer RNA11,83511,90470 bp+–
ND5Protein-coding gene11,90513,7161,812 bp+40.5%
ND6Protein-coding gene13,71314,237525 bp−39.8%
tRNA-GluTransfer RNA14,23814,30669 bp−–
CYTBProtein-coding gene14,31215,4541,143 bp+42.6%
tRNA-ThrTransfer RNA15,45715,52367 bp+–
tRNA-ProTransfer RNA15,52415,59168 bp−–

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