Coelorinchus caelorhincus
Hollowsnout grenadier
GC content
42.79%
Whole genome
Non-coding
1,133 bp
Including the D-loop
Where Hollowsnout grenadier sits among 2,335 species
Whole-genome GC content against maximum lifespan. Hollowsnout grenadier has the 1,611th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,671 bp
- GC skew (G − C) / (G + C)
- −0.294
- AT skew (A − T) / (A + T)
- +0.023
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,671 bp
Protein-coding11,400 bp
12S rRNA944 bp
16S rRNA1,658 bp
All tRNA1,536 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 972 bp | 44.03% | −0.397 | −0.033 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,044 bp | 40.90% | −0.382 | −0.021 | |||||
| COX1Cytochrome c oxidase subunit I | 1,546 bp | 43.79% | −0.182 | −0.114 | |||||
| COX2Cytochrome c oxidase subunit II | 685 bp | 43.21% | −0.230 | −0.023 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 33.33% | −0.571 | +0.036 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 42.11% | −0.479 | −0.066 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 43.44% | −0.249 | −0.095 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 44.99% | −0.376 | −0.229 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 47.14% | −0.386 | −0.083 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 42.65% | −0.362 | −0.048 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,845 bp | 42.60% | −0.420 | +0.007 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 44.83% | −0.462 | +0.451 | |||||
| CYTBCytochrome b | 1,140 bp | 43.68% | −0.378 | −0.072 | |||||
| 12S rRNA12S ribosomal RNA | 944 bp | 46.72% | −0.111 | +0.197 | |||||
| 16S rRNA16S ribosomal RNA | 1,658 bp | 41.50% | −0.116 | +0.206 |
Codon usage
Counts per codon, darker is more frequent3,804 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.7%
UUU145
UUC108
Leu L17.2%
UUA119
UUG21
CUU153
CUC137
CUA181
CUG42
Ile I8.2%
AUU201
AUC110
Met M4.5%
AUA130
AUG42
Val V5.2%
GUU56
GUC35
GUA77
GUG28
Ser S7.1%
UCU45
UCC87
UCA65
UCG9
AGU18
AGC46
Pro P5.6%
CCU39
CCC117
CCA52
CCG6
Thr T7.5%
ACU58
ACC104
ACA114
ACG9
Ala A8.1%
GCU62
GCC139
GCA95
GCG12
Tyr Y2.9%
UAU64
UAC45
His H2.8%
CAU38
CAC67
Gln Q2.4%
CAA80
CAG11
Asn N3.2%
AAU54
AAC67
Lys K2.3%
AAA76
AAG11
Asp D2.0%
GAU40
GAC37
Glu E2.4%
GAA70
GAG23
Cys C0.8%
UGU9
UGC23
Trp W3.0%
UGA103
UGG12
Arg R1.9%
CGU15
CGC12
CGA38
CGG6
Gly G6.1%
GGU36
GGC75
GGA77
GGG45
Stop 0.2%
UAA6
UAG0
AGA2
AGG0
Genome map
37 annotated features in NC_082995.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (42.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 68 | 68 bp | + | – |
| 12S rRNA | Ribosomal RNA | 69 | 1,012 | 944 bp | + | 46.7% |
| tRNA-Val | Transfer RNA | 1,013 | 1,083 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,084 | 2,741 | 1,658 bp | + | 41.5% |
| tRNA-Leu (UUR) | Transfer RNA | 2,742 | 2,815 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,816 | 3,787 | 972 bp | + | 44.0% |
| tRNA-Ile | Transfer RNA | 3,792 | 3,862 | 71 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,862 | 3,932 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,932 | 4,001 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,002 | 5,045 | 1,044 bp | + | 40.9% |
| tRNA-Trp | Transfer RNA | 5,058 | 5,127 | 70 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,129 | 5,197 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,199 | 5,271 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,304 | 5,367 | 64 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,372 | 5,438 | 67 bp | − | – |
| COX1 | Protein-coding gene | 5,440 | 6,985 | 1,546 bp | + | 43.8% |
| tRNA-Ser (UCN) | Transfer RNA | 6,986 | 7,056 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,060 | 7,128 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,138 | 7,822 | 685 bp | + | 43.2% |
| tRNA-Lys | Transfer RNA | 7,823 | 7,893 | 71 bp | + | – |
| ATP8 | Protein-coding gene | 7,895 | 8,062 | 168 bp | + | 33.3% |
| ATP6 | Protein-coding gene | 8,053 | 8,736 | 684 bp | + | 42.1% |
| COX3 | Protein-coding gene | 8,736 | 9,520 | 785 bp | + | 43.4% |
| tRNA-Gly | Transfer RNA | 9,521 | 9,589 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,590 | 9,938 | 349 bp | + | 45.0% |
| tRNA-Arg | Transfer RNA | 9,939 | 10,007 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,008 | 10,304 | 297 bp | + | 47.1% |
| ND4 | Protein-coding gene | 10,298 | 11,678 | 1,381 bp | + | 42.7% |
| tRNA-His | Transfer RNA | 11,679 | 11,747 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,748 | 11,815 | 68 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,817 | 11,889 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,890 | 13,734 | 1,845 bp | + | 42.6% |
| ND6 | Protein-coding gene | 13,735 | 14,256 | 522 bp | − | 44.8% |
| CYTB | Protein-coding gene | 14,315 | 15,454 | 1,140 bp | + | 43.7% |
| tRNA-Thr | Transfer RNA | 15,462 | 15,535 | 74 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,546 | 15,615 | 70 bp | − | – |
| tRNA-Glu | Transfer RNA | 15,633 | 15,699 | 67 bp | − | – |