Coilia mystus
Osbeck's grenadier anchovy
GC content
42.36%
Whole genome
Non-coding
1,549 bp
D-loop 1,491 bp
Where Osbeck's grenadier anchovy sits among 2,335 species
Whole-genome GC content against maximum lifespan. Osbeck's grenadier anchovy has the 2,034th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome17,143 bp
- GC skew (G − C) / (G + C)
- −0.255
- AT skew (A − T) / (A + T)
- +0.070
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome17,143 bp
Protein-coding11,403 bp
12S rRNA953 bp
16S rRNA1,692 bp
All tRNA1,546 bp
D-loop1,491 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 41.95% | −0.325 | −0.018 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,045 bp | 43.64% | −0.491 | +0.104 | |||||
| COX1Cytochrome c oxidase subunit I | 1,551 bp | 42.75% | −0.149 | −0.047 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 44.43% | −0.225 | +0.036 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 37.50% | −0.397 | +0.010 | |||||
| ATP6ATP synthase F0 subunit 6 | 684 bp | 41.37% | −0.371 | −0.037 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 44.71% | −0.254 | −0.028 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 41.26% | −0.278 | −0.054 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 46.13% | −0.299 | 0.000 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 41.20% | −0.343 | +0.039 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,836 bp | 39.82% | −0.371 | +0.068 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 43.49% | −0.419 | +0.417 | |||||
| CYTBCytochrome b | 1,141 bp | 42.59% | −0.305 | −0.041 | |||||
| 12S rRNA12S ribosomal RNA | 953 bp | 48.90% | −0.112 | +0.236 | |||||
| 16S rRNA16S ribosomal RNA | 1,692 bp | 44.86% | −0.104 | +0.267 | |||||
| D-loopControl region (D-loop) | 1,491 bp | 32.13% | −0.198 | +0.032 |
Codon usage
Counts per codon, darker is more frequent3,806 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.1%
UUU126
UUC105
Leu L16.0%
UUA149
UUG20
CUU126
CUC97
CUA192
CUG25
Ile I7.8%
AUU192
AUC103
Met M4.3%
AUA123
AUG42
Val V5.8%
GUU57
GUC44
GUA99
GUG22
Ser S6.2%
UCU41
UCC44
UCA82
UCG10
AGU11
AGC49
Pro P5.6%
CCU67
CCC62
CCA77
CCG8
Thr T8.5%
ACU67
ACC110
ACA137
ACG8
Ala A9.1%
GCU66
GCC124
GCA144
GCG13
Tyr Y2.9%
UAU45
UAC67
His H2.7%
CAU30
CAC72
Gln Q2.6%
CAA89
CAG11
Asn N3.3%
AAU46
AAC80
Lys K2.0%
AAA76
AAG2
Asp D1.9%
GAU20
GAC54
Glu E2.7%
GAA84
GAG19
Cys C0.8%
UGU15
UGC16
Trp W3.2%
UGA110
UGG10
Arg R1.9%
CGU5
CGC14
CGA45
CGG9
Gly G6.3%
GGU39
GGC55
GGA108
GGG36
Stop 0.2%
UAA7
UAG0
AGA0
AGG0
Genome map
38 annotated features in NC_019644.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (42.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,022 | 953 bp | + | 48.9% |
| tRNA-Val | Transfer RNA | 1,023 | 1,094 | 72 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,095 | 2,786 | 1,692 bp | + | 44.9% |
| tRNA-Leu (UUR) | Transfer RNA | 2,787 | 2,861 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,862 | 3,836 | 975 bp | + | 42.0% |
| tRNA-Ile | Transfer RNA | 3,838 | 3,909 | 72 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,909 | 3,979 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,979 | 4,047 | 69 bp | + | – |
| ND2 | Protein-coding gene | 4,048 | 5,092 | 1,045 bp | + | 43.6% |
| tRNA-Trp | Transfer RNA | 5,093 | 5,164 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,166 | 5,234 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,236 | 5,308 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,339 | 5,404 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,405 | 5,475 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,477 | 7,027 | 1,551 bp | + | 42.8% |
| tRNA-Ser (UCN) | Transfer RNA | 7,028 | 7,098 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,103 | 7,171 | 69 bp | + | – |
| COX2 | Protein-coding gene | 7,184 | 7,874 | 691 bp | + | 44.4% |
| tRNA-Lys | Transfer RNA | 7,875 | 7,947 | 73 bp | + | – |
| ATP8 | Protein-coding gene | 7,949 | 8,116 | 168 bp | + | 37.5% |
| ATP6 | Protein-coding gene | 8,107 | 8,790 | 684 bp | + | 41.4% |
| COX3 | Protein-coding gene | 8,790 | 9,574 | 785 bp | + | 44.7% |
| tRNA-Gly | Transfer RNA | 9,575 | 9,645 | 71 bp | + | – |
| ND3 | Protein-coding gene | 9,646 | 9,994 | 349 bp | + | 41.3% |
| tRNA-Arg | Transfer RNA | 9,995 | 10,063 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,064 | 10,360 | 297 bp | + | 46.1% |
| ND4 | Protein-coding gene | 10,354 | 11,734 | 1,381 bp | + | 41.2% |
| tRNA-His | Transfer RNA | 11,735 | 11,803 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,805 | 11,871 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,872 | 11,943 | 72 bp | + | – |
| ND5 | Protein-coding gene | 11,944 | 13,779 | 1,836 bp | + | 39.8% |
| ND6 | Protein-coding gene | 13,776 | 14,297 | 522 bp | − | 43.5% |
| tRNA-Glu | Transfer RNA | 14,299 | 14,367 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,373 | 15,513 | 1,141 bp | + | 42.6% |
| tRNA-Thr | Transfer RNA | 15,514 | 15,583 | 70 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,582 | 15,652 | 71 bp | − | – |
| D-loop | Control region | 15,653 | 17,143 | 1,491 bp | – | 32.1% |