MitoAge

Cricetiscus sungorus

Dzhungarian hamster

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Maximum lifespan
3.9 yr
AnAge record
mtDNA size
16,346 bp
RefSeq NC_042823.1
GC content
36.57%
Whole genome
Non-coding
1,002 bp
D-loop 948 bp

Where Dzhungarian hamster sits among 2,335 species

Whole-genome GC content against maximum lifespan. Dzhungarian hamster has the 2,152nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Dzhungarian hamster
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,346 bp
GC skew (G − C) / (G + C)
−0.319
AT skew (A − T) / (A + T)
+0.092

Life history

Maximum lifespan
3.9 years
Adult weight
23.4 g
Birth weight
2 g
Basal metabolic rate
0.313 W
Body temperature
36.1 °C
Female sexual maturity
120 days
Gestation or incubation
20 days
Litter or clutch size
5.5
Litters per year
3.5

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02923)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,346 bp
Protein-coding11,330 bp
12S rRNA949 bp
16S rRNA1,571 bp
All tRNA1,498 bp
D-loop948 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp33.2%29.0%10.9%26.9%37.80%−0.424+0.067
ND2NADH dehydrogenase subunit 21,033 bp36.8%27.6%7.0%28.7%35.62%−0.609+0.143
COX1Cytochrome c oxidase subunit I1,545 bp30.2%30.0%16.2%23.6%39.81%−0.184+0.002
COX2Cytochrome c oxidase subunit II684 bp35.2%28.1%12.9%23.8%36.70%−0.299+0.113
ATP8ATP synthase F0 subunit 8204 bp40.2%27.9%6.4%25.5%31.86%−0.600+0.180
ATP6ATP synthase F0 subunit 6681 bp33.5%29.2%10.3%27.0%37.30%−0.449+0.068
COX3Cytochrome c oxidase subunit III784 bp30.4%28.4%14.4%26.8%41.20%−0.300+0.033
ND3NADH dehydrogenase subunit 3348 bp35.3%31.6%10.3%22.7%33.05%−0.374+0.056
ND4LNADH dehydrogenase subunit 4L297 bp33.0%33.3%10.4%23.2%33.67%−0.380−0.005
ND4NADH dehydrogenase subunit 41,378 bp34.7%30.0%9.9%25.5%35.34%−0.441+0.073
ND5NADH dehydrogenase subunit 51,821 bp34.5%30.3%9.9%25.3%35.20%−0.435+0.066
ND6NADH dehydrogenase subunit 6525 bp44.0%21.1%7.2%27.6%34.86%−0.585+0.351
CYTBCytochrome b1,143 bp32.1%29.0%12.8%26.1%38.85%−0.342+0.050
12S rRNA12S ribosomal RNA949 bp37.8%25.6%15.9%20.7%36.57%−0.130+0.193
16S rRNA16S ribosomal RNA1,571 bp38.8%24.6%16.9%19.7%36.54%−0.077+0.224
D-loopControl region (D-loop)948 bp29.7%35.4%11.9%22.9%34.81%−0.315−0.087

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.1%
UUU106
UUC127
Leu L15.3%
UUA149
UUG9
CUU94
CUC57
CUA259
CUG13
Ile I9.4%
AUU214
AUC142
Met M6.3%
AUA211
AUG27
Val V4.7%
GUU30
GUC21
GUA118
GUG10
Ser S7.6%
UCU55
UCC45
UCA133
UCG6
AGU20
AGC31
Pro P5.1%
CCU35
CCC40
CCA114
CCG4
Thr T8.6%
ACU63
ACC73
ACA183
ACG8
Ala A6.3%
GCU60
GCC87
GCA91
GCG3
Tyr Y3.3%
UAU69
UAC58
His H2.7%
CAU35
CAC66
Gln Q2.2%
CAA79
CAG3
Asn N4.4%
AAU73
AAC96
Lys K2.7%
AAA96
AAG6
Asp D1.9%
GAU23
GAC50
Glu E2.4%
GAA77
GAG14
Cys C0.8%
UGU11
UGC20
Trp W2.7%
UGA94
UGG7
Arg R1.7%
CGU6
CGC6
CGA52
CGG0
Gly G5.5%
GGU50
GGC39
GGA96
GGG25
Stop 0.2%
UAA9
UAG0
AGA0
AGG0

Genome map

38 annotated features in NC_042823.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (36.6%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16767 bp+–
12S rRNARibosomal RNA691,017949 bp+36.6%
tRNA-ValTransfer RNA1,0191,09072 bp+–
16S rRNARibosomal RNA1,0912,6611,571 bp+36.5%
tRNA-Leu (UUR)Transfer RNA2,6632,73775 bp+–
ND1Protein-coding gene2,7383,692955 bp+37.8%
tRNA-IleTransfer RNA3,6933,76068 bp+–
tRNA-GlnTransfer RNA3,7583,82871 bp−–
tRNA-MetTransfer RNA3,8243,89976 bp+–
ND2Protein-coding gene3,9004,9321,033 bp+35.6%
tRNA-TrpTransfer RNA4,9334,99967 bp+–
tRNA-AlaTransfer RNA5,0025,07170 bp−–
tRNA-AsnTransfer RNA5,0735,14371 bp−–
tRNA-CysTransfer RNA5,1765,24267 bp+–
tRNA-TyrTransfer RNA5,2435,30967 bp−–
COX1Protein-coding gene5,3116,8551,545 bp+39.8%
tRNA-Ser (UCN)Transfer RNA6,8536,92169 bp−–
tRNA-AspTransfer RNA6,9256,99268 bp+–
COX2Protein-coding gene6,9947,677684 bp+36.7%
tRNA-LysTransfer RNA7,6817,74464 bp+–
ATP8Protein-coding gene7,7467,949204 bp+31.9%
ATP6Protein-coding gene7,9078,587681 bp+37.3%
COX3Protein-coding gene8,5879,370784 bp+41.2%
tRNA-GlyTransfer RNA9,3709,43768 bp+–
ND3Protein-coding gene9,4389,785348 bp+33.1%
tRNA-ArgTransfer RNA9,7899,85668 bp+–
ND4LProtein-coding gene9,85710,153297 bp+33.7%
ND4Protein-coding gene10,14711,5241,378 bp+35.3%
tRNA-HisTransfer RNA11,52511,59167 bp+–
tRNA-Ser (AGY)Transfer RNA11,59211,64958 bp+–
tRNA-Leu (CUN)Transfer RNA11,65011,71970 bp+–
ND5Protein-coding gene11,72013,5401,821 bp+35.2%
ND6Protein-coding gene13,52414,048525 bp−34.9%
tRNA-GluTransfer RNA14,04914,11769 bp−–
CYTBProtein-coding gene14,12215,2641,143 bp+38.9%
tRNA-ThrTransfer RNA15,26715,33367 bp+–
tRNA-ProTransfer RNA15,33415,40067 bp−–
D-loopControl region15,39916,346948 bp–34.8%

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