MitoAge

Cricetulus barabensis

Striped dwarf hamster

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Maximum lifespan
5.3 yr
AnAge record
mtDNA size
16,282 bp
RefSeq NC_053822.1
GC content
35.73%
Whole genome
Non-coding
941 bp
D-loop 885 bp

Where Striped dwarf hamster sits among 2,335 species

Whole-genome GC content against maximum lifespan. Striped dwarf hamster has the 1,974th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Striped dwarf hamster
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,282 bp
GC skew (G − C) / (G + C)
−0.274
AT skew (A − T) / (A + T)
+0.050

Life history

Maximum lifespan
5.3 years
Birth weight
2 g
Body temperature
36.9 °C
Litter or clutch size
5.3

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02874)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,282 bp
Protein-coding11,330 bp
12S rRNA954 bp
16S rRNA1,561 bp
All tRNA1,496 bp
D-loop885 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1955 bp33.2%31.6%10.8%24.4%35.18%−0.387+0.024
ND2NADH dehydrogenase subunit 21,033 bp34.8%32.1%7.4%25.8%33.11%−0.556+0.039
COX1Cytochrome c oxidase subunit I1,545 bp29.7%32.6%16.2%21.5%37.67%−0.141−0.047
COX2Cytochrome c oxidase subunit II684 bp33.0%31.4%14.2%21.3%35.53%−0.202+0.025
ATP8ATP synthase F0 subunit 8204 bp38.2%29.9%4.9%27.0%31.86%−0.692+0.122
ATP6ATP synthase F0 subunit 6681 bp33.5%31.9%10.4%24.2%34.66%−0.398+0.025
COX3Cytochrome c oxidase subunit III784 bp31.0%30.2%14.7%24.1%38.78%−0.243+0.013
ND3NADH dehydrogenase subunit 3348 bp31.6%34.5%11.8%22.1%33.91%−0.305−0.043
ND4LNADH dehydrogenase subunit 4L297 bp29.6%33.0%14.5%22.9%37.37%−0.225−0.054
ND4NADH dehydrogenase subunit 41,378 bp34.5%32.7%10.3%22.5%32.80%−0.372+0.026
ND5NADH dehydrogenase subunit 51,821 bp34.2%31.5%10.5%23.8%34.32%−0.389+0.042
ND6NADH dehydrogenase subunit 6525 bp40.4%22.7%8.8%28.2%36.95%−0.526+0.281
CYTBCytochrome b1,143 bp31.3%31.8%12.5%24.3%36.83%−0.321−0.008
12S rRNA12S ribosomal RNA954 bp35.2%26.3%18.1%20.3%38.47%−0.057+0.145
16S rRNA16S ribosomal RNA1,561 bp38.2%25.8%17.3%18.8%36.07%−0.041+0.194
D-loopControl region (D-loop)885 bp29.4%31.6%12.9%26.1%38.98%−0.339−0.037

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.3%
UUU126
UUC115
Leu L15.2%
UUA166
UUG17
CUU103
CUC52
CUA226
CUG12
Ile I9.5%
AUU227
AUC135
Met M6.4%
AUA203
AUG39
Val V4.7%
GUU41
GUC17
GUA104
GUG18
Ser S7.7%
UCU73
UCC31
UCA139
UCG4
AGU18
AGC28
Pro P5.1%
CCU45
CCC21
CCA124
CCG2
Thr T8.1%
ACU100
ACC49
ACA152
ACG5
Ala A6.3%
GCU92
GCC54
GCA87
GCG5
Tyr Y3.3%
UAU73
UAC54
His H2.6%
CAU42
CAC57
Gln Q2.2%
CAA80
CAG3
Asn N4.3%
AAU87
AAC76
Lys K2.8%
AAA98
AAG8
Asp D1.9%
GAU43
GAC30
Glu E2.4%
GAA73
GAG20
Cys C0.8%
UGU14
UGC18
Trp W2.7%
UGA96
UGG6
Arg R1.7%
CGU13
CGC7
CGA40
CGG4
Gly G5.7%
GGU43
GGC41
GGA108
GGG25
Stop 0.2%
UAA9
UAG0
AGA0
AGG0

Genome map

38 annotated features in NC_053822.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (35.7%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,022954 bp+38.5%
tRNA-ValTransfer RNA1,0231,09472 bp+–
16S rRNARibosomal RNA1,0952,6551,561 bp+36.1%
tRNA-Leu (UUR)Transfer RNA2,6572,73175 bp+–
ND1Protein-coding gene2,7323,686955 bp+35.2%
tRNA-IleTransfer RNA3,6873,75569 bp+–
tRNA-GlnTransfer RNA3,7543,82774 bp−–
tRNA-MetTransfer RNA3,8283,89669 bp+–
ND2Protein-coding gene3,8974,9291,033 bp+33.1%
tRNA-TrpTransfer RNA4,9304,99667 bp+–
tRNA-AlaTransfer RNA4,9995,06870 bp−–
tRNA-AsnTransfer RNA5,0715,14171 bp−–
tRNA-CysTransfer RNA5,1745,24067 bp−–
tRNA-TyrTransfer RNA5,2415,30868 bp+–
COX1Protein-coding gene5,3096,8531,545 bp+37.7%
tRNA-Ser (UCN)Transfer RNA6,8546,91966 bp+–
tRNA-AspTransfer RNA6,9236,99169 bp+–
COX2Protein-coding gene6,9937,676684 bp+35.5%
tRNA-LysTransfer RNA7,6857,74359 bp+–
ATP8Protein-coding gene7,7457,948204 bp+31.9%
ATP6Protein-coding gene7,9068,586681 bp+34.7%
COX3Protein-coding gene8,5869,369784 bp+38.8%
tRNA-GlyTransfer RNA9,3709,43768 bp+–
ND3Protein-coding gene9,4389,785348 bp+33.9%
tRNA-ArgTransfer RNA9,7879,85468 bp+–
ND4LProtein-coding gene9,85610,152297 bp+37.4%
ND4Protein-coding gene10,14611,5231,378 bp+32.8%
tRNA-HisTransfer RNA11,52411,59168 bp+–
tRNA-Ser (AGY)Transfer RNA11,59211,64958 bp+–
tRNA-Leu (CUN)Transfer RNA11,64911,71971 bp+–
ND5Protein-coding gene11,72013,5401,821 bp+34.3%
ND6Protein-coding gene13,52414,048525 bp−37.0%
tRNA-GluTransfer RNA14,04914,11769 bp−–
CYTBProtein-coding gene14,12215,2641,143 bp+36.8%
tRNA-ThrTransfer RNA15,26515,33268 bp+–
tRNA-ProTransfer RNA15,33315,39765 bp−–
D-loopControl region15,39816,282885 bp–39.0%

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