MitoAge

Crocodylus moreletii

Morelet's crocodile

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Maximum lifespan
25.4 yr
AnAge record
mtDNA size
16,827 bp
RefSeq NC_015235.1
GC content
42.99%
Whole genome
Non-coding
1,322 bp
D-loop 1,076 bp

Where Morelet's crocodile sits among 2,335 species

Whole-genome GC content against maximum lifespan. Morelet's crocodile has the 617th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Morelet's crocodile
  • This species
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  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,827 bp
GC skew (G − C) / (G + C)
−0.314
AT skew (A − T) / (A + T)
+0.122

Life history

Maximum lifespan
25.4 years
Adult weight
38.5 kg
Female sexual maturity
7 years
Male sexual maturity
7.5 years

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03254)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Unchanged since build 1
In the database since
build 1 (2015-07-01)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,827 bp
Protein-coding11,382 bp
12S rRNA987 bp
16S rRNA1,595 bp
All tRNA1,546 bp
D-loop1,076 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1963 bp28.1%27.1%15.3%29.5%44.76%−0.318+0.019
ND2NADH dehydrogenase subunit 21,056 bp30.7%25.6%11.8%31.9%43.75%−0.459+0.091
COX1Cytochrome c oxidase subunit I1,557 bp29.3%28.3%15.9%26.3%42.27%−0.247+0.018
COX2Cytochrome c oxidase subunit II684 bp33.8%24.6%13.7%27.9%41.67%−0.340+0.158
ATP8ATP synthase F0 subunit 8162 bp40.7%25.3%8.6%25.3%33.95%−0.491+0.234
ATP6ATP synthase F0 subunit 6696 bp31.3%24.9%12.5%31.3%43.82%−0.430+0.115
COX3Cytochrome c oxidase subunit III784 bp27.9%26.3%15.6%30.2%45.79%−0.320+0.031
ND3NADH dehydrogenase subunit 3348 bp29.0%25.3%16.1%29.6%45.69%−0.296+0.069
ND4LNADH dehydrogenase subunit 4L294 bp25.9%29.3%12.2%32.7%44.90%−0.455−0.062
ND4NADH dehydrogenase subunit 41,374 bp30.4%25.5%13.2%30.8%44.06%−0.398+0.089
ND5NADH dehydrogenase subunit 51,860 bp32.0%24.7%12.2%31.1%43.33%−0.437+0.129
ND6NADH dehydrogenase subunit 6528 bp38.6%15.9%11.4%34.1%45.46%−0.500+0.417
CYTBCytochrome b1,156 bp29.8%25.9%13.4%31.0%44.38%−0.396+0.070
12S rRNA12S ribosomal RNA987 bp32.4%19.9%21.5%26.1%47.67%−0.098+0.240
16S rRNA16S ribosomal RNA1,595 bp36.3%21.0%18.5%24.2%42.70%−0.134+0.267
D-loopControl region (D-loop)1,076 bp37.3%31.0%12.3%19.4%31.69%−0.226+0.091

Codon usage

Counts per codon, darker is more frequent

3,814 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.8%
UUU81
UUC139
Leu L16.9%
UUA114
UUG26
CUU75
CUC93
CUA271
CUG66
Ile I8.0%
AUU145
AUC162
Met M5.2%
AUA150
AUG50
Val V5.0%
GUU38
GUC46
GUA80
GUG25
Ser S7.7%
UCU39
UCC71
UCA104
UCG11
AGU10
AGC57
Pro P5.3%
CCU21
CCC50
CCA116
CCG14
Thr T9.2%
ACU48
ACC129
ACA152
ACG20
Ala A7.7%
GCU39
GCC144
GCA101
GCG8
Tyr Y3.0%
UAU49
UAC66
His H2.4%
CAU17
CAC74
Gln Q2.9%
CAA93
CAG17
Asn N3.4%
AAU26
AAC103
Lys K2.3%
AAA80
AAG9
Asp D1.9%
GAU15
GAC58
Glu E2.4%
GAA67
GAG24
Cys C0.7%
UGU12
UGC16
Trp W2.6%
UGA81
UGG19
Arg R1.9%
CGU4
CGC17
CGA45
CGG5
Gly G5.5%
GGU23
GGC62
GGA86
GGG40
Stop 0.3%
UAA8
UAG1
AGA0
AGG2

Genome map

38 annotated features in NC_015235.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (43.0%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
12S rRNARibosomal RNA1987987 bp+47.7%
tRNA-ValTransfer RNA9881,05669 bp+–
16S rRNARibosomal RNA1,0602,6541,595 bp+42.7%
tRNA-Leu (UUR)Transfer RNA2,6522,72574 bp+–
ND1Protein-coding gene2,7263,688963 bp+44.8%
tRNA-IleTransfer RNA3,6873,75872 bp+–
tRNA-GlnTransfer RNA3,7573,82771 bp−–
tRNA-MetTransfer RNA3,8303,89768 bp+–
ND2Protein-coding gene3,9024,9571,056 bp+43.8%
tRNA-TrpTransfer RNA4,9585,03174 bp+–
tRNA-AlaTransfer RNA5,0345,10269 bp−–
tRNA-AsnTransfer RNA5,1045,17673 bp−–
tRNA-CysTransfer RNA5,1835,24866 bp−–
tRNA-TyrTransfer RNA5,2495,31971 bp−–
COX1Protein-coding gene5,3216,8771,557 bp+42.3%
tRNA-Ser (UCN)Transfer RNA6,8976,96670 bp−–
tRNA-AspTransfer RNA6,9707,04172 bp+–
COX2Protein-coding gene7,0427,725684 bp+41.7%
tRNA-LysTransfer RNA7,7277,80074 bp+–
ATP8Protein-coding gene7,8027,963162 bp+34.0%
ATP6Protein-coding gene7,9428,637696 bp+43.8%
COX3Protein-coding gene8,6379,420784 bp+45.8%
tRNA-GlyTransfer RNA9,4219,49070 bp+–
ND3Protein-coding gene9,4919,838348 bp+45.7%
tRNA-ArgTransfer RNA9,8499,91769 bp+–
ND4LProtein-coding gene9,92110,214294 bp+44.9%
ND4Protein-coding gene10,20811,5811,374 bp+44.1%
tRNA-Ser (AGY)Transfer RNA11,61111,67363 bp+–
tRNA-HisTransfer RNA11,69011,75970 bp+–
tRNA-Leu (CUN)Transfer RNA11,78911,85971 bp+–
ND5Protein-coding gene11,86313,7221,860 bp+43.3%
ND6Protein-coding gene13,67314,200528 bp−45.5%
tRNA-GluTransfer RNA14,20114,27171 bp−–
CYTBProtein-coding gene14,28615,4411,156 bp+44.4%
tRNA-ThrTransfer RNA15,49815,56972 bp+–
tRNA-ProTransfer RNA15,58215,65069 bp−–
tRNA-PheTransfer RNA15,66115,73070 bp+–
D-loopControl region15,75216,8271,076 bp–31.7%

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