MitoAge

Crocodylus novaeguineae

New Guinea crocodile

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Maximum lifespan
51 yr
AnAge record
mtDNA size
16,894 bp
RefSeq NC_015651.1
GC content
43.29%
Whole genome
Non-coding
1,385 bp
D-loop 1,183 bp

Where New Guinea crocodile sits among 2,335 species

Whole-genome GC content against maximum lifespan. New Guinea crocodile has the 131st longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %New Guinea crocodile
  • This species
  • Other reptiles
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,894 bp
GC skew (G − C) / (G + C)
−0.318
AT skew (A − T) / (A + T)
+0.137

Life history

Maximum lifespan
51 years
Adult weight
39.9 kg
Female sexual maturity
6 years
Male sexual maturity
10 years
Gestation or incubation
87 days

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 03256)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,894 bp
Protein-coding11,388 bp
12S rRNA983 bp
16S rRNA1,595 bp
All tRNA1,545 bp
D-loop1,183 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1963 bp26.3%26.7%16.6%30.4%47.04%−0.294−0.008
ND2NADH dehydrogenase subunit 21,056 bp31.1%24.9%11.3%32.8%44.03%−0.488+0.110
COX1Cytochrome c oxidase subunit I1,557 bp29.4%27.0%16.2%27.4%43.61%−0.255+0.043
COX2Cytochrome c oxidase subunit II684 bp33.8%25.1%13.7%27.3%41.08%−0.331+0.146
ATP8ATP synthase F0 subunit 8162 bp41.4%21.6%7.4%29.6%37.04%−0.600+0.314
ATP6ATP synthase F0 subunit 6696 bp32.3%24.9%12.2%30.6%42.82%−0.430+0.131
COX3Cytochrome c oxidase subunit III784 bp28.7%26.0%15.4%29.8%45.28%−0.318+0.049
ND3NADH dehydrogenase subunit 3348 bp30.2%24.7%16.1%29.0%45.12%−0.287+0.099
ND4LNADH dehydrogenase subunit 4L294 bp25.5%27.2%12.2%35.0%47.28%−0.482−0.032
ND4NADH dehydrogenase subunit 41,374 bp31.2%25.1%12.8%30.9%43.67%−0.413+0.109
ND5NADH dehydrogenase subunit 51,860 bp32.0%24.4%12.3%31.3%43.60%−0.438+0.134
ND6NADH dehydrogenase subunit 6525 bp40.0%15.6%9.7%34.7%44.38%−0.562+0.438
CYTBCytochrome b1,165 bp29.2%25.2%13.7%31.8%45.58%−0.397+0.073
12S rRNA12S ribosomal RNA983 bp32.5%19.5%21.6%26.4%48.02%−0.102+0.249
16S rRNA16S ribosomal RNA1,595 bp36.2%20.3%18.8%24.7%43.51%−0.135+0.281
D-loopControl region (D-loop)1,183 bp39.9%29.7%11.7%18.7%30.43%−0.228+0.147

Codon usage

Counts per codon, darker is more frequent

3,822 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.7%
UUU81
UUC137
Leu L17.1%
UUA107
UUG26
CUU71
CUC86
CUA285
CUG77
Ile I7.8%
AUU138
AUC159
Met M5.3%
AUA151
AUG51
Val V4.8%
GUU37
GUC38
GUA73
GUG35
Ser S7.7%
UCU32
UCC83
UCA105
UCG11
AGU8
AGC55
Pro P5.3%
CCU23
CCC53
CCA114
CCG14
Thr T9.5%
ACU37
ACC158
ACA155
ACG15
Ala A7.5%
GCU39
GCC138
GCA103
GCG5
Tyr Y3.1%
UAU42
UAC75
His H2.4%
CAU16
CAC77
Gln Q2.9%
CAA89
CAG20
Asn N3.4%
AAU31
AAC99
Lys K2.3%
AAA79
AAG10
Asp D1.9%
GAU17
GAC57
Glu E2.4%
GAA67
GAG23
Cys C0.7%
UGU9
UGC17
Trp W2.6%
UGA79
UGG21
Arg R1.8%
CGU6
CGC14
CGA43
CGG6
Gly G5.6%
GGU18
GGC55
GGA96
GGG45
Stop 0.3%
UAA8
UAG1
AGA0
AGG2

Genome map

38 annotated features in NC_015651.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (43.3%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
12S rRNARibosomal RNA1983983 bp+48.0%
tRNA-ValTransfer RNA9841,05269 bp+–
16S rRNARibosomal RNA1,0532,6471,595 bp+43.5%
tRNA-Leu (UUR)Transfer RNA2,6492,72375 bp+–
ND1Protein-coding gene2,7243,686963 bp+47.0%
tRNA-IleTransfer RNA3,6853,75672 bp+–
tRNA-GlnTransfer RNA3,7553,82571 bp−–
tRNA-MetTransfer RNA3,8283,89669 bp+–
ND2Protein-coding gene3,9014,9561,056 bp+44.0%
tRNA-TrpTransfer RNA4,9575,02973 bp+–
tRNA-AlaTransfer RNA5,0325,10069 bp−–
tRNA-AsnTransfer RNA5,1025,17473 bp−–
tRNA-CysTransfer RNA5,1815,24666 bp−–
tRNA-TyrTransfer RNA5,2475,31771 bp−–
COX1Protein-coding gene5,3196,8751,557 bp+43.6%
tRNA-Ser (UCN)Transfer RNA6,8966,96570 bp−–
tRNA-AspTransfer RNA6,9697,04072 bp+–
COX2Protein-coding gene7,0417,724684 bp+41.1%
tRNA-LysTransfer RNA7,7267,79974 bp+–
ATP8Protein-coding gene7,8017,962162 bp+37.0%
ATP6Protein-coding gene7,9418,636696 bp+42.8%
COX3Protein-coding gene8,6369,419784 bp+45.3%
tRNA-GlyTransfer RNA9,4209,48970 bp+–
ND3Protein-coding gene9,4909,837348 bp+45.1%
tRNA-ArgTransfer RNA9,8489,91669 bp+–
ND4LProtein-coding gene9,92010,213294 bp+47.3%
ND4Protein-coding gene10,20711,5801,374 bp+43.7%
tRNA-Ser (AGY)Transfer RNA11,61211,67261 bp+–
tRNA-HisTransfer RNA11,69011,75970 bp+–
tRNA-Leu (CUN)Transfer RNA11,77111,84171 bp+–
ND5Protein-coding gene11,84513,7041,860 bp+43.6%
ND6Protein-coding gene13,65514,179525 bp−44.4%
tRNA-GluTransfer RNA14,18014,25071 bp−–
CYTBProtein-coding gene14,26615,4301,165 bp+45.6%
tRNA-ThrTransfer RNA15,47915,55173 bp+–
tRNA-ProTransfer RNA15,56515,63268 bp−–
tRNA-PheTransfer RNA15,64315,71270 bp+–
D-loopControl region15,71216,8941,183 bp–30.4%

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