MitoAge

Cynopterus sphinx

Greater short-nosed fruit bat

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Maximum lifespan
10 yr
AnAge record
mtDNA size
16,897 bp
RefSeq NC_046902.1
GC content
42.48%
Whole genome
Non-coding
1,500 bp
D-loop 1,432 bp

Where Greater short-nosed fruit bat sits among 2,335 species

Whole-genome GC content against maximum lifespan. Greater short-nosed fruit bat has the 1,572nd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Greater short-nosed fruit bat
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,897 bp
GC skew (G − C) / (G + C)
−0.324
AT skew (A − T) / (A + T)
+0.118

Life history

Maximum lifespan
10 years
Adult weight
75 g
Birth weight
11 g
Female sexual maturity
150 days
Male sexual maturity
525 days
Gestation or incubation
120 days
Litter or clutch size
1.2
Litters per year
2

Lifespan from AnAge · AnAge record · other traits from AnAge build 15 (HAGRID 02352)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,897 bp
Protein-coding11,349 bp
12S rRNA967 bp
16S rRNA1,568 bp
All tRNA1,520 bp
D-loop1,432 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1956 bp28.9%26.5%13.9%30.8%44.67%−0.377+0.043
ND2NADH dehydrogenase subunit 21,044 bp34.1%24.5%10.9%30.5%41.38%−0.472+0.163
COX1Cytochrome c oxidase subunit I1,545 bp26.0%29.3%17.5%27.2%44.66%−0.217−0.060
COX2Cytochrome c oxidase subunit II684 bp31.7%25.7%13.9%28.7%42.54%−0.347+0.104
ATP8ATP synthase F0 subunit 8204 bp38.2%27.0%6.9%27.5%34.48%−0.600+0.173
ATP6ATP synthase F0 subunit 6681 bp30.0%26.9%11.3%31.7%43.09%−0.474+0.054
COX3Cytochrome c oxidase subunit III784 bp26.4%26.8%15.6%31.3%46.81%−0.335−0.007
ND3NADH dehydrogenase subunit 3348 bp29.9%28.4%12.9%28.7%41.67%−0.379+0.025
ND4LNADH dehydrogenase subunit 4L297 bp28.3%29.0%13.5%29.3%42.76%−0.370−0.012
ND4NADH dehydrogenase subunit 41,378 bp31.8%25.7%11.9%30.6%42.53%−0.440+0.106
ND5NADH dehydrogenase subunit 51,818 bp32.9%25.5%11.3%30.3%41.64%−0.456+0.127
ND6NADH dehydrogenase subunit 6525 bp41.0%20.2%7.4%31.4%38.86%−0.618+0.340
CYTBCytochrome b1,140 bp29.6%26.4%13.8%30.3%44.04%−0.375+0.056
12S rRNA12S ribosomal RNA967 bp36.5%21.4%19.5%22.5%42.09%−0.071+0.261
16S rRNA16S ribosomal RNA1,568 bp36.8%23.3%18.3%21.6%39.86%−0.082+0.224
D-loopControl region (D-loop)1,432 bp32.5%21.9%15.0%30.5%45.53%−0.340+0.195

Codon usage

Counts per codon, darker is more frequent

3,798 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F5.9%
UUU76
UUC147
Leu L16.3%
UUA71
UUG31
CUU68
CUC131
CUA266
CUG53
Ile I8.3%
AUU147
AUC169
Met M6.5%
AUA184
AUG61
Val V5.2%
GUU37
GUC43
GUA95
GUG22
Ser S7.6%
UCU34
UCC98
UCA90
UCG12
AGU20
AGC36
Pro P5.2%
CCU36
CCC71
CCA82
CCG8
Thr T8.2%
ACU35
ACC125
ACA134
ACG18
Ala A6.5%
GCU35
GCC110
GCA88
GCG13
Tyr Y3.5%
UAU58
UAC74
His H2.6%
CAU21
CAC77
Gln Q2.4%
CAA78
CAG12
Asn N3.9%
AAU43
AAC106
Lys K2.6%
AAA86
AAG11
Asp D1.8%
GAU19
GAC51
Glu E2.5%
GAA75
GAG20
Cys C0.6%
UGU6
UGC17
Trp W2.7%
UGA90
UGG14
Arg R1.7%
CGU5
CGC10
CGA46
CGG3
Gly G5.8%
GGU31
GGC68
GGA94
GGG27
Stop 0.3%
UAA9
UAG0
AGA0
AGG1

Genome map

38 annotated features in NC_046902.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (42.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16868 bp+–
12S rRNARibosomal RNA691,035967 bp+42.1%
tRNA-ValTransfer RNA1,0351,10268 bp+–
16S rRNARibosomal RNA1,1032,6701,568 bp+39.9%
tRNA-Leu (CUN)Transfer RNA2,6712,74575 bp+–
ND1Protein-coding gene2,7493,704956 bp+44.7%
tRNA-IleTransfer RNA3,7053,77369 bp+–
tRNA-GlnTransfer RNA3,7713,84272 bp−–
tRNA-MetTransfer RNA3,8433,91775 bp+–
ND2Protein-coding gene3,9184,9611,044 bp+41.4%
tRNA-TrpTransfer RNA4,9635,03371 bp+–
tRNA-AlaTransfer RNA5,0375,10569 bp−–
tRNA-AsnTransfer RNA5,1075,17973 bp−–
tRNA-CysTransfer RNA5,2125,28069 bp−–
tRNA-TyrTransfer RNA5,2825,34766 bp−–
COX1Protein-coding gene5,3496,8931,545 bp+44.7%
tRNA-Ser (UCN)Transfer RNA6,8916,95969 bp−–
tRNA-AspTransfer RNA6,9657,03268 bp+–
COX2Protein-coding gene7,0347,717684 bp+42.5%
tRNA-LysTransfer RNA7,7217,79171 bp+–
ATP8Protein-coding gene7,7937,996204 bp+34.5%
ATP6Protein-coding gene7,9548,634681 bp+43.1%
COX3Protein-coding gene8,6349,417784 bp+46.8%
tRNA-GlyTransfer RNA9,4179,48670 bp+–
ND3Protein-coding gene9,4869,833348 bp+41.7%
tRNA-ArgTransfer RNA9,8419,90868 bp+–
ND4LProtein-coding gene9,90910,205297 bp+42.8%
ND4Protein-coding gene10,19911,5761,378 bp+42.5%
tRNA-HisTransfer RNA11,57711,64468 bp+–
tRNA-Ser (AGY)Transfer RNA11,64511,70460 bp+–
tRNA-Leu (UUR)Transfer RNA11,70611,77570 bp+–
ND5Protein-coding gene11,77613,5931,818 bp+41.6%
ND6Protein-coding gene13,59014,114525 bp−38.9%
tRNA-GluTransfer RNA14,11514,18369 bp−–
CYTBProtein-coding gene14,18815,3271,140 bp+44.0%
tRNA-ThrTransfer RNA15,32715,39670 bp+–
tRNA-ProTransfer RNA15,39615,46166 bp−–
D-loopControl region15,46216,8931,432 bp–45.5%

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