Diagramma pictum
Painted sweetlips
GC content
47.81%
Whole genome
Non-coding
924 bp
D-loop 840 bp
Where Painted sweetlips sits among 2,335 species
Whole-genome GC content against maximum lifespan. Painted sweetlips has the 1,370th longest lifespan of them.
- This species
- Other ray-finned fishes
- Other classes
Base composition
Whole genome16,530 bp
- GC skew (G − C) / (G + C)
- −0.294
- AT skew (A − T) / (A + T)
- +0.056
About this record
- Lifespan source
- FishBase v26.06
- Based on
- an animal in the wild
- Data quality
- acceptable
- Licence
- CC BY-NC 4.0
- Status
- New in build 2
- In the database since
- build 2 (2026-11-13)
The lifespan value is for non-commercial use only; the genome data is not restricted by it.
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,530 bp
Protein-coding11,420 bp
12S rRNA951 bp
16S rRNA1,694 bp
All tRNA1,554 bp
D-loop840 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 975 bp | 49.54% | −0.354 | −0.033 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,047 bp | 48.33% | −0.514 | +0.072 | |||||
| COX1Cytochrome c oxidase subunit I | 1,563 bp | 49.07% | −0.168 | −0.088 | |||||
| COX2Cytochrome c oxidase subunit II | 691 bp | 46.45% | −0.271 | +0.032 | |||||
| ATP8ATP synthase F0 subunit 8 | 168 bp | 45.83% | −0.584 | +0.077 | |||||
| ATP6ATP synthase F0 subunit 6 | 683 bp | 48.32% | −0.430 | −0.014 | |||||
| COX3Cytochrome c oxidase subunit III | 785 bp | 46.88% | −0.299 | −0.002 | |||||
| ND3NADH dehydrogenase subunit 3 | 349 bp | 53.87% | −0.415 | −0.230 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 51.85% | −0.377 | −0.077 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,381 bp | 50.83% | −0.373 | +0.025 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,839 bp | 47.69% | −0.414 | +0.037 | |||||
| ND6NADH dehydrogenase subunit 6 | 522 bp | 50.96% | −0.376 | +0.477 | |||||
| CYTBCytochrome b | 1,141 bp | 48.03% | −0.380 | −0.035 | |||||
| 12S rRNA12S ribosomal RNA | 951 bp | 47.53% | −0.089 | +0.186 | |||||
| 16S rRNA16S ribosomal RNA | 1,694 bp | 46.34% | −0.118 | +0.237 | |||||
| D-loopControl region (D-loop) | 840 bp | 38.93% | −0.260 | +0.025 |
Codon usage
Counts per codon, darker is more frequent3,811 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.0%
UUU68
UUC162
Leu L17.5%
UUA67
UUG14
CUU128
CUC196
CUA180
CUG83
Ile I7.2%
AUU126
AUC150
Met M3.9%
AUA73
AUG77
Val V5.6%
GUU44
GUC86
GUA55
GUG28
Ser S6.4%
UCU40
UCC77
UCA63
UCG9
AGU10
AGC45
Pro P5.8%
CCU51
CCC113
CCA44
CCG12
Thr T8.1%
ACU49
ACC123
ACA122
ACG15
Ala A8.9%
GCU48
GCC161
GCA107
GCG24
Tyr Y3.1%
UAU32
UAC87
His H2.8%
CAU24
CAC83
Gln Q2.5%
CAA84
CAG13
Asn N3.1%
AAU31
AAC89
Lys K1.9%
AAA65
AAG9
Asp D2.0%
GAU21
GAC57
Glu E2.6%
GAA62
GAG36
Cys C0.5%
UGU1
UGC19
Trp W3.2%
UGA109
UGG12
Arg R2.0%
CGU11
CGC15
CGA43
CGG7
Gly G6.4%
GGU20
GGC92
GGA76
GGG56
Stop 0.2%
UAA5
UAG1
AGA0
AGG1
Genome map
38 annotated features in NC_009856.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- D-loop1
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (47.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,020 | 951 bp | + | 47.5% |
| tRNA-Val | Transfer RNA | 1,021 | 1,091 | 71 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,092 | 2,785 | 1,694 bp | + | 46.3% |
| tRNA-Leu (UUR) | Transfer RNA | 2,786 | 2,859 | 74 bp | + | – |
| ND1 | Protein-coding gene | 2,860 | 3,834 | 975 bp | + | 49.5% |
| tRNA-Ile | Transfer RNA | 3,840 | 3,909 | 70 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,909 | 3,979 | 71 bp | − | – |
| tRNA-Met | Transfer RNA | 3,979 | 4,048 | 70 bp | + | – |
| ND2 | Protein-coding gene | 4,049 | 5,095 | 1,047 bp | + | 48.3% |
| tRNA-Trp | Transfer RNA | 5,096 | 5,167 | 72 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,168 | 5,236 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,238 | 5,310 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,348 | 5,415 | 68 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,416 | 5,486 | 71 bp | − | – |
| COX1 | Protein-coding gene | 5,488 | 7,050 | 1,563 bp | + | 49.1% |
| tRNA-Ser (UCN) | Transfer RNA | 7,038 | 7,108 | 71 bp | − | – |
| tRNA-Asp | Transfer RNA | 7,112 | 7,183 | 72 bp | + | – |
| COX2 | Protein-coding gene | 7,189 | 7,879 | 691 bp | + | 46.5% |
| tRNA-Lys | Transfer RNA | 7,880 | 7,953 | 74 bp | + | – |
| ATP8 | Protein-coding gene | 7,955 | 8,122 | 168 bp | + | 45.8% |
| ATP6 | Protein-coding gene | 8,113 | 8,795 | 683 bp | + | 48.3% |
| COX3 | Protein-coding gene | 8,796 | 9,580 | 785 bp | + | 46.9% |
| tRNA-Gly | Transfer RNA | 9,581 | 9,652 | 72 bp | + | – |
| ND3 | Protein-coding gene | 9,653 | 10,001 | 349 bp | + | 53.9% |
| tRNA-Arg | Transfer RNA | 10,002 | 10,070 | 69 bp | + | – |
| ND4L | Protein-coding gene | 10,071 | 10,367 | 297 bp | + | 51.9% |
| ND4 | Protein-coding gene | 10,361 | 11,741 | 1,381 bp | + | 50.8% |
| tRNA-His | Transfer RNA | 11,742 | 11,810 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,811 | 11,877 | 67 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,882 | 11,954 | 73 bp | + | – |
| ND5 | Protein-coding gene | 11,955 | 13,793 | 1,839 bp | + | 47.7% |
| ND6 | Protein-coding gene | 13,790 | 14,311 | 522 bp | − | 51.0% |
| tRNA-Glu | Transfer RNA | 14,312 | 14,380 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,385 | 15,525 | 1,141 bp | + | 48.0% |
| tRNA-Thr | Transfer RNA | 15,526 | 15,597 | 72 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,621 | 15,690 | 70 bp | − | – |
| D-loop | Control region | 15,691 | 16,530 | 840 bp | – | 38.9% |