Dicerorhinus sumatrensis
Sumatran rhinoceros
GC content
41.54%
Whole genome
Non-coding
1,079 bp
Including the D-loop
Where Sumatran rhinoceros sits among 2,335 species
Whole-genome GC content against maximum lifespan. Sumatran rhinoceros has the 377th longest lifespan of them.
- This species
- Other mammals
- Other classes
Base composition
Whole genome16,466 bp
- GC skew (G − C) / (G + C)
- −0.362
- AT skew (A − T) / (A + T)
- +0.133
Life history
- Maximum lifespan
- 32.8 years
- Adult weight
- 1.3 t
- Birth weight
- 23 kg
- Female sexual maturity
- 7.5 years
- Gestation or incubation
- 236 days
- Litter or clutch size
- 1
- Litters per year
- 0.3
Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02644)
About this record
- Lifespan source
- AnAge build 15
- Based on
- an animal in captivity
- Data quality
- acceptable, tiny sample
- Licence
- Free to use, subject to the Human Ageing Genomic Resources conditions of use
- Status
- Unchanged since build 1
- In the database since
- build 1 (2015-07-01)
Every change against the 2015 build is in the changelog download.
Composition by region
Reference (L) strand as deposited in RefSeqWhole genome16,466 bp
Protein-coding11,338 bp
12S rRNA972 bp
16S rRNA1,578 bp
All tRNA1,502 bp
Genes and regions
Select a column to sort; select a gene to compare it across species| Composition | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| ND1NADH dehydrogenase subunit 1 | 956 bp | 42.26% | −0.475 | +0.141 | |||||
| ND2NADH dehydrogenase subunit 2 | 1,042 bp | 38.87% | −0.541 | +0.190 | |||||
| COX1Cytochrome c oxidase subunit I | 1,545 bp | 44.60% | −0.222 | +0.014 | |||||
| COX2Cytochrome c oxidase subunit II | 684 bp | 41.67% | −0.319 | +0.123 | |||||
| ATP8ATP synthase F0 subunit 8 | 204 bp | 34.80% | −0.634 | +0.233 | |||||
| ATP6ATP synthase F0 subunit 6 | 681 bp | 41.41% | −0.433 | +0.008 | |||||
| COX3Cytochrome c oxidase subunit III | 784 bp | 46.56% | −0.332 | +0.007 | |||||
| ND3NADH dehydrogenase subunit 3 | 346 bp | 42.49% | −0.374 | +0.075 | |||||
| ND4LNADH dehydrogenase subunit 4L | 297 bp | 41.75% | −0.387 | −0.017 | |||||
| ND4NADH dehydrogenase subunit 4 | 1,378 bp | 41.36% | −0.495 | +0.129 | |||||
| ND5NADH dehydrogenase subunit 5 | 1,821 bp | 43.27% | −0.485 | +0.119 | |||||
| ND6NADH dehydrogenase subunit 6 | 528 bp | 39.02% | −0.650 | +0.398 | |||||
| CYTBCytochrome b | 1,140 bp | 46.67% | −0.459 | +0.079 | |||||
| 12S rRNA12S ribosomal RNA | 972 bp | 41.77% | −0.177 | +0.286 | |||||
| 16S rRNA16S ribosomal RNA | 1,578 bp | 38.91% | −0.153 | +0.232 |
Codon usage
Counts per codon, darker is more frequent3,800 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).
Phe F6.2%
UUU73
UUC161
Leu L15.9%
UUA77
UUG15
CUU53
CUC123
CUA292
CUG45
Ile I8.8%
AUU133
AUC202
Met M6.3%
AUA196
AUG42
Val V4.9%
GUU30
GUC46
GUA84
GUG26
Ser S7.9%
UCU34
UCC82
UCA114
UCG9
AGU16
AGC45
Pro P5.2%
CCU41
CCC69
CCA82
CCG7
Thr T8.4%
ACU39
ACC112
ACA157
ACG12
Ala A6.3%
GCU36
GCC107
GCA90
GCG8
Tyr Y3.4%
UAU40
UAC90
His H2.6%
CAU22
CAC78
Gln Q2.3%
CAA76
CAG13
Asn N4.0%
AAU36
AAC116
Lys K2.6%
AAA85
AAG13
Asp D1.7%
GAU15
GAC50
Glu E2.5%
GAA73
GAG22
Cys C0.7%
UGU11
UGC14
Trp W2.7%
UGA90
UGG13
Arg R1.7%
CGU4
CGC17
CGA38
CGG4
Gly G5.6%
GGU25
GGC69
GGA93
GGG27
Stop 0.2%
UAA7
UAG0
AGA1
AGG0
Genome map
37 annotated features in NC_012684.1Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.
- Protein-coding13
- rRNA2
- tRNA22
- Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
- Middle ring: GC% of each gene against the whole genome (41.5%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 37 features as a table
| Feature | Type | Start | End | Length | Strand | GC |
|---|---|---|---|---|---|---|
| tRNA-Phe | Transfer RNA | 1 | 69 | 69 bp | + | – |
| 12S rRNA | Ribosomal RNA | 70 | 1,041 | 972 bp | + | 41.8% |
| tRNA-Val | Transfer RNA | 1,042 | 1,108 | 67 bp | + | – |
| 16S rRNA | Ribosomal RNA | 1,109 | 2,686 | 1,578 bp | + | 38.9% |
| tRNA-Leu (UUR) | Transfer RNA | 2,687 | 2,761 | 75 bp | + | – |
| ND1 | Protein-coding gene | 2,764 | 3,719 | 956 bp | + | 42.3% |
| tRNA-Ile | Transfer RNA | 3,720 | 3,788 | 69 bp | + | – |
| tRNA-Gln | Transfer RNA | 3,786 | 3,858 | 73 bp | − | – |
| tRNA-Met | Transfer RNA | 3,861 | 3,929 | 69 bp | + | – |
| ND2 | Protein-coding gene | 3,930 | 4,971 | 1,042 bp | + | 38.9% |
| tRNA-Trp | Transfer RNA | 4,972 | 5,039 | 68 bp | + | – |
| tRNA-Ala | Transfer RNA | 5,045 | 5,113 | 69 bp | − | – |
| tRNA-Asn | Transfer RNA | 5,115 | 5,187 | 73 bp | − | – |
| tRNA-Cys | Transfer RNA | 5,220 | 5,285 | 66 bp | − | – |
| tRNA-Tyr | Transfer RNA | 5,286 | 5,352 | 67 bp | − | – |
| COX1 | Protein-coding gene | 5,354 | 6,898 | 1,545 bp | + | 44.6% |
| tRNA-Ser (UCN) | Transfer RNA | 6,896 | 6,960 | 65 bp | − | – |
| tRNA-Asp | Transfer RNA | 6,972 | 7,038 | 67 bp | + | – |
| COX2 | Protein-coding gene | 7,039 | 7,722 | 684 bp | + | 41.7% |
| tRNA-Lys | Transfer RNA | 7,726 | 7,792 | 67 bp | + | – |
| ATP8 | Protein-coding gene | 7,794 | 7,997 | 204 bp | + | 34.8% |
| ATP6 | Protein-coding gene | 7,955 | 8,635 | 681 bp | + | 41.4% |
| COX3 | Protein-coding gene | 8,635 | 9,418 | 784 bp | + | 46.6% |
| tRNA-Gly | Transfer RNA | 9,419 | 9,487 | 69 bp | + | – |
| ND3 | Protein-coding gene | 9,488 | 9,833 | 346 bp | + | 42.5% |
| tRNA-Arg | Transfer RNA | 9,835 | 9,904 | 70 bp | + | – |
| ND4L | Protein-coding gene | 9,905 | 10,201 | 297 bp | + | 41.8% |
| ND4 | Protein-coding gene | 10,195 | 11,572 | 1,378 bp | + | 41.4% |
| tRNA-His | Transfer RNA | 11,573 | 11,641 | 69 bp | + | – |
| tRNA-Ser (AGY) | Transfer RNA | 11,642 | 11,700 | 59 bp | + | – |
| tRNA-Leu (CUN) | Transfer RNA | 11,702 | 11,771 | 70 bp | + | – |
| ND5 | Protein-coding gene | 11,772 | 13,592 | 1,821 bp | + | 43.3% |
| ND6 | Protein-coding gene | 13,576 | 14,103 | 528 bp | − | 39.0% |
| tRNA-Glu | Transfer RNA | 14,104 | 14,172 | 69 bp | − | – |
| CYTB | Protein-coding gene | 14,177 | 15,316 | 1,140 bp | + | 46.7% |
| tRNA-Thr | Transfer RNA | 15,317 | 15,385 | 69 bp | + | – |
| tRNA-Pro | Transfer RNA | 15,387 | 15,452 | 66 bp | − | – |