GC content
48.43%
Whole genome
Non-coding
3,027 bp
D-loop 2,009 bp

Where Patagonian toothfish sits among 2,335 species

Whole-genome GC content against maximum lifespan. Patagonian toothfish has the 148th longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Patagonian toothfish
  • This species
  • Other ray-finned fishes
  • Other classes

Base composition

Whole genome18,704 bp
GC skew (G − C) / (G + C)
−0.237
AT skew (A − T) / (A + T)
−0.003

Life history

Maximum lifespan
50 years

Lifespan from AnAge · AnAge record

About this record

Lifespan source
AnAge build 15
Based on
an observed animal, origin not stated
Data quality
acceptable, medium sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
New in build 2
In the database since
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome18,704 bp
Protein-coding11,417 bp
12S rRNA951 bp
16S rRNA1,694 bp
All tRNA1,615 bp
D-loop2,009 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Base composition of Dissostichus eleginoides genes
Composition
ND1NADH dehydrogenase subunit 1975 bp21.2%28.2%17.8%32.7%50.56%−0.294−0.141
ND2NADH dehydrogenase subunit 21,046 bp21.4%24.5%17.9%36.2%54.11%−0.339−0.067
COX1Cytochrome c oxidase subunit I1,549 bp23.1%28.8%18.5%29.6%48.10%−0.230−0.109
COX2Cytochrome c oxidase subunit II691 bp25.9%26.5%17.2%30.4%47.61%−0.277−0.011
ATP8ATP synthase F0 subunit 8168 bp28.6%26.8%13.1%31.5%44.64%−0.413+0.032
ATP6ATP synthase F0 subunit 6696 bp22.6%29.2%16.5%31.8%48.28%−0.315−0.128
COX3Cytochrome c oxidase subunit III785 bp23.8%27.1%18.5%30.6%49.05%−0.247−0.065
ND3NADH dehydrogenase subunit 3349 bp18.9%31.8%16.3%33.0%49.28%−0.337−0.254
ND4LNADH dehydrogenase subunit 4L297 bp20.5%29.6%17.5%32.3%49.83%−0.297−0.181
ND4NADH dehydrogenase subunit 41,381 bp22.3%27.6%17.5%32.7%50.11%−0.303−0.106
ND5NADH dehydrogenase subunit 51,839 bp24.9%26.2%16.9%32.1%48.99%−0.312−0.026
ND6NADH dehydrogenase subunit 6507 bp29.4%15.6%17.0%38.1%55.03%−0.384+0.307
CYTBCytochrome b1,141 bp21.1%27.1%18.5%33.3%51.80%−0.286−0.124
12S rRNA12S ribosomal RNA951 bp30.4%22.2%22.8%24.6%47.42%−0.038+0.156
16S rRNA16S ribosomal RNA1,694 bp31.9%20.8%21.4%26.0%47.34%−0.097+0.211
D-loopControl region (D-loop)2,009 bp28.2%29.5%17.0%25.4%42.36%−0.199−0.022

Codon usage

Counts per codon, darker is more frequent

3,805 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.0%
UUU108
UUC121
Leu L17.2%
UUA68
UUG43
CUU142
CUC186
CUA134
CUG83
Ile I6.6%
AUU138
AUC115
Met M3.8%
AUA74
AUG71
Val V6.4%
GUU56
GUC76
GUA63
GUG47
Ser S6.3%
UCU46
UCC77
UCA42
UCG16
AGU16
AGC43
Pro P5.8%
CCU46
CCC125
CCA38
CCG11
Thr T7.5%
ACU49
ACC134
ACA83
ACG21
Ala A9.9%
GCU65
GCC174
GCA108
GCG31
Tyr Y3.0%
UAU32
UAC82
His H2.7%
CAU26
CAC77
Gln Q2.7%
CAA77
CAG27
Asn N2.7%
AAU33
AAC71
Lys K2.0%
AAA49
AAG29
Asp D2.0%
GAU15
GAC63
Glu E2.5%
GAA50
GAG44
Cys C0.8%
UGU13
UGC18
Trp W3.0%
UGA80
UGG36
Arg R2.1%
CGU9
CGC21
CGA34
CGG15
Gly G6.5%
GGU26
GGC99
GGA59
GGG64
Stop 0.2%
UAA4
UAG2
AGA0
AGG0

Genome map

40 annotated features in NC_018135.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA23
  • D-loop2
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (48.4%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 40 features as a table
Annotated features of Dissostichus eleginoides (NC_018135.1)
FeatureTypeStartEndLengthStrandGC
ND1Protein-coding gene1975975 bp+50.6%
tRNA-IleTransfer RNA9801,04970 bp+–
tRNA-GlnTransfer RNA1,0491,12072 bp−–
tRNA-MetTransfer RNA1,1201,18869 bp+–
ND2Protein-coding gene1,1892,2341,046 bp+54.1%
tRNA-TrpTransfer RNA2,2352,30571 bp+–
tRNA-AlaTransfer RNA2,3072,37569 bp−–
tRNA-AsnTransfer RNA2,3772,44973 bp−–
tRNA-CysTransfer RNA2,4852,55268 bp−–
tRNA-TyrTransfer RNA2,5532,62371 bp−–
COX1Protein-coding gene2,6244,1721,549 bp+48.1%
tRNA-Ser (UCN)Transfer RNA4,1754,24571 bp−–
tRNA-AspTransfer RNA4,2474,31771 bp+–
COX2Protein-coding gene4,3205,010691 bp+47.6%
tRNA-LysTransfer RNA5,0135,08674 bp+–
ATP8Protein-coding gene5,0885,255168 bp+44.6%
ATP6Protein-coding gene5,2565,951696 bp+48.3%
COX3Protein-coding gene5,9996,783785 bp+49.1%
tRNA-GlyTransfer RNA6,7846,85370 bp+–
ND3Protein-coding gene6,8547,202349 bp+49.3%
tRNA-ArgTransfer RNA7,2037,27169 bp+–
ND4LProtein-coding gene7,2727,568297 bp+49.8%
ND4Protein-coding gene7,5628,9421,381 bp+50.1%
tRNA-HisTransfer RNA8,9439,01169 bp+–
tRNA-Ser (AGY)Transfer RNA9,0129,07867 bp+–
tRNA-Leu (CUN)Transfer RNA9,0839,15573 bp+–
ND5Protein-coding gene9,15610,9941,839 bp+49.0%
CYTBProtein-coding gene11,07812,2181,141 bp+51.8%
tRNA-ThrTransfer RNA12,21912,29072 bp+–
tRNA-ProTransfer RNA12,29012,35970 bp−–
D-loopControl region12,36013,257898 bp–42.4%
ND6Protein-coding gene13,25813,764507 bp−55.0%
tRNA-LysTransfer RNA13,76513,83066 bp−–
tRNA-GluTransfer RNA14,66614,73469 bp−–
D-loopControl region14,73515,8451,111 bp–42.4%
tRNA-PheTransfer RNA15,84615,91368 bp+–
12S rRNARibosomal RNA15,91416,864951 bp+47.4%
tRNA-ValTransfer RNA16,86516,93672 bp+–
16S rRNARibosomal RNA16,93718,6301,694 bp+47.3%
tRNA-Leu (UUR)Transfer RNA18,63118,70474 bp+–