MitoAge

Echymipera rufescens

Long-nosed echymipera

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Maximum lifespan
3.1 yr
AnAge record
mtDNA size
16,642 bp
RefSeq NC_007632.1
GC content
33.84%
Whole genome
Non-coding
1,283 bp
D-loop 1,166 bp

Where Long-nosed echymipera sits among 2,335 species

Whole-genome GC content against maximum lifespan. Long-nosed echymipera has the 2,173rd longest lifespan of them.

10203040501 yr10 yr100 yrMaximum lifespan, log scaleGC %Long-nosed echymipera
  • This species
  • Other mammals
  • Other classes
Plot other mtDNA features with this species highlighted

Base composition

Whole genome16,642 bp
GC skew (G − C) / (G + C)
−0.286
AT skew (A − T) / (A + T)
+0.049

Life history

Maximum lifespan
3.1 years
Adult weight
1.3 kg
Basal metabolic rate
2.255 W
Body temperature
34.9 °C
Litter or clutch size
2.2

Lifespan from AnAge · AnAge record · other traits from AnAge Build 15 (HAGRID 02627)

About this record

Lifespan source
AnAge build 15
Based on
an animal in captivity
Data quality
acceptable, small sample
Licence
Free to use, subject to the Human Ageing Genomic Resources conditions of use
Status
Updated in build 2
In the database since
build 1 (2015-07-01)
Last changed
build 2 (2026-11-13)

Every change against the 2015 build is in the changelog download.

Composition by region

Reference (L) strand as deposited in RefSeq
Whole genome16,642 bp
Protein-coding11,340 bp
12S rRNA955 bp
16S rRNA1,577 bp
All tRNA1,502 bp
D-loop1,166 bp

Genes and regions

Select a column to sort; select a gene to compare it across species
Composition
ND1NADH dehydrogenase subunit 1957 bp32.8%32.6%11.0%23.5%34.52%−0.364+0.003
ND2NADH dehydrogenase subunit 21,044 bp37.0%31.2%8.0%23.9%31.80%−0.500+0.084
COX1Cytochrome c oxidase subunit I1,542 bp30.0%34.3%15.1%20.6%35.67%−0.153−0.067
COX2Cytochrome c oxidase subunit II685 bp34.6%31.7%13.6%20.1%33.72%−0.195+0.044
ATP8ATP synthase F0 subunit 8213 bp39.4%31.0%6.6%23.0%29.58%−0.556+0.120
ATP6ATP synthase F0 subunit 6681 bp32.9%33.8%9.3%24.1%33.33%−0.445−0.013
COX3Cytochrome c oxidase subunit III784 bp29.2%32.7%14.4%23.6%38.06%−0.242−0.056
ND3NADH dehydrogenase subunit 3348 bp33.3%31.9%10.9%23.6%34.58%−0.367+0.022
ND4LNADH dehydrogenase subunit 4L297 bp31.6%35.0%11.4%21.9%33.33%−0.313−0.051
ND4NADH dehydrogenase subunit 41,378 bp33.3%33.5%9.7%23.3%33.02%−0.414−0.003
ND5NADH dehydrogenase subunit 51,818 bp33.6%32.6%9.7%24.1%33.79%−0.427+0.016
ND6NADH dehydrogenase subunit 6501 bp44.1%21.8%7.4%26.3%33.87%−0.562+0.339
CYTBCytochrome b1,146 bp31.3%29.8%12.4%25.7%38.40%−0.350+0.024
12S rRNA12S ribosomal RNA955 bp36.8%25.0%16.3%19.6%36.76%−0.090+0.190
16S rRNA16S ribosomal RNA1,577 bp38.1%27.0%15.7%17.3%33.61%−0.050+0.170
D-loopControl region (D-loop)1,166 bp37.0%34.6%9.6%14.5%25.20%−0.203+0.034

Codon usage

Counts per codon, darker is more frequent

3,780 codons in all protein-coding genes. Grouped with the Vertebrate mitochondrial code (NCBI table 2).

Phe F6.2%
UUU129
UUC105
Leu L15.8%
UUA202
UUG20
CUU82
CUC40
CUA245
CUG9
Ile I10.2%
AUU280
AUC104
Met M6.2%
AUA199
AUG34
Val V4.1%
GUU58
GUC8
GUA80
GUG9
Ser S7.5%
UCU65
UCC45
UCA128
UCG1
AGU22
AGC23
Pro P5.1%
CCU54
CCC25
CCA110
CCG3
Thr T7.7%
ACU78
ACC62
ACA147
ACG5
Ala A6.6%
GCU71
GCC87
GCA92
GCG1
Tyr Y3.6%
UAU87
UAC49
His H2.6%
CAU49
CAC49
Gln Q2.3%
CAA83
CAG3
Asn N4.2%
AAU87
AAC72
Lys K2.5%
AAA93
AAG1
Asp D1.7%
GAU34
GAC32
Glu E2.3%
GAA82
GAG6
Cys C0.9%
UGU12
UGC21
Trp W2.8%
UGA96
UGG10
Arg R1.8%
CGU9
CGC4
CGA54
CGG0
Gly G5.7%
GGU54
GGC36
GGA113
GGG11
Stop 0.3%
UAA7
UAG2
AGA0
AGG1

Genome map

38 annotated features in NC_007632.1

Hover, tap or tab to a feature to see its position, length, strand and GC content. Genes and rRNAs open their own pages.

  • Protein-coding13
  • rRNA2
  • tRNA22
  • D-loop1
  • Outer ring: + strand, arrows run clockwise. Inner ring: − strand.
  • Middle ring: GC% of each gene against the whole genome (33.8%, dashed): out is GC-richer, in is AT-richer (full height = 6 points).
All 38 features as a table
FeatureTypeStartEndLengthStrandGC
tRNA-PheTransfer RNA16969 bp+–
12S rRNARibosomal RNA701,024955 bp+36.8%
tRNA-ValTransfer RNA1,0251,09369 bp+–
16S rRNARibosomal RNA1,0942,6701,577 bp+33.6%
tRNA-Leu (UUR)Transfer RNA2,6712,74474 bp+–
ND1Protein-coding gene2,7463,702957 bp+34.5%
tRNA-IleTransfer RNA3,7023,76968 bp+–
tRNA-GlnTransfer RNA3,7673,83771 bp−–
tRNA-MetTransfer RNA3,8373,90569 bp+–
ND2Protein-coding gene3,9064,9491,044 bp+31.8%
tRNA-AlaTransfer RNA4,9615,02969 bp−–
tRNA-CysTransfer RNA5,0385,10467 bp−–
tRNA-TrpTransfer RNA5,1065,17469 bp+–
tRNA-AsnTransfer RNA5,2555,32672 bp−–
tRNA-TyrTransfer RNA5,3315,39969 bp−–
COX1Protein-coding gene5,4016,9421,542 bp+35.7%
tRNA-Ser (UCN)Transfer RNA6,9457,01369 bp−–
tRNA-AspTransfer RNA7,0167,08570 bp+–
COX2Protein-coding gene7,0877,771685 bp+33.7%
tRNA-LysTransfer RNA7,7697,83062 bp+–
ATP8Protein-coding gene7,8318,043213 bp+29.6%
ATP6Protein-coding gene7,9988,678681 bp+33.3%
COX3Protein-coding gene8,6789,461784 bp+38.1%
tRNA-GlyTransfer RNA9,4629,52968 bp+–
ND3Protein-coding gene9,5309,877348 bp+34.6%
tRNA-ArgTransfer RNA9,8769,94469 bp+–
ND4LProtein-coding gene9,94510,241297 bp+33.3%
ND4Protein-coding gene10,23511,6121,378 bp+33.0%
tRNA-HisTransfer RNA11,61311,68169 bp+–
tRNA-Ser (AGY)Transfer RNA11,68211,74059 bp+–
tRNA-Leu (CUN)Transfer RNA11,74011,81071 bp+–
ND5Protein-coding gene11,80213,6191,818 bp+33.8%
ND6Protein-coding gene13,62014,120501 bp−33.9%
tRNA-GluTransfer RNA14,12114,18969 bp−–
CYTBProtein-coding gene14,19315,3381,146 bp+38.4%
tRNA-ThrTransfer RNA15,34115,40868 bp+–
tRNA-ProTransfer RNA15,41015,47667 bp−–
D-loopControl region15,47716,6421,166 bp–25.2%

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